Flavobacterium flavipigmentatum: LNP22_08075
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Entry
LNP22_08075 CDS
T10330
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
ffv Flavobacterium flavipigmentatum
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
LNP22_08075
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Motif
Pfam:
BSH_RND
Beta-barrel_YknX
Beta-barrel_AprE
BSH_CzcB
HH_MFP_RND
BSH_CusB
CzcB_C
BSH_LcnD
RND-MFP_C
HH_YBHG
Beta-barrel_RND_2
HH_CzcB
YknX_C
HH_EMRA
BSH_YhbJ
Biotin_lipoyl
OEP
LcnD_C
BSH_Fcp1
Motif
Other DBs
NCBI-ProteinID:
UFH40222
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Position
1792199..1793491
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AA seq
430 aa
AA seq
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MSKKTIYFLVGGAVVLIVALIGLSKAGVIGNKDEGKEVEVSKVIASTIVETVSATGKIQP
EIEVKISPEVSGEITLLNVKEGQVVKKGDLLVKINPDLYTSSYNRSVSNLSGTRAGLTQS
QASFKEAKANYERNKTLYDKGVISKADWDKAIASFEVAKATQQNAYYTVQSASASVKEAK
DNLGRTTIYAPADGTISVLNVELGERVLGTQQMAGTELLRVANLNNMEVEVDVNENDIVK
IKIGDEANVEVDAYLKKQFKGIVTSISNSASSTLTSDQVTNFKVKVRILKESYLDLLEGK
PSTYSPFRPGMTATVDIITKTRANVLAVPISSVVVKADTASVKDFKVDNLDEDKKTAPKS
DKKFECVFVKVGDKAKIRIIKTGIQDDTNIEVMSGLQPGDVVITGPYTTVSKDLNSGDKV
KLKKAETPKK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaaaacaatttatttcttagtcgggggtgcagtagtccttattgtagcttta
attggtttgtcaaaagccggagtgataggaaataaggatgaaggaaaagaagtagaggtt
tctaaggtaatagcttcaactattgttgaaacagtttcggcaacaggtaaaattcagccg
gaaattgaggtaaaaatttcgccggaagtttcgggcgagatcactttattaaatgtaaaa
gaagggcaagttgtaaaaaaaggagatttattagtaaagataaaccctgatttatatacc
tcaagttacaatcgttctgtttctaatttgtcaggaacaagagccggacttacccaatct
caagcaagttttaaagaagcaaaagccaactacgaacgaaataaaacgttgtatgataaa
ggtgtaatctcaaaagcagattgggacaaagcaattgcttcttttgaagtagcaaaagcg
actcagcaaaatgcgtattacacagtacaaagtgcttcggcttcggtaaaagaggcaaaa
gacaatttgggacgtaccactatttatgctcctgcagatggtactatttcggtgctgaat
gtagaactgggagaacgagttttaggaacgcagcaaatggcaggaacagagcttttgaga
gtggccaacctaaacaatatggaggttgaggttgatgtaaacgaaaatgacattgtaaag
ataaaaatcggtgacgaagccaatgttgaagtagatgcttatctgaaaaaacaatttaaa
ggaattgttaccagtatttcaaattcggcaagcagtacattgacatctgatcaggtgact
aattttaaggtaaaagtgaggattttaaaagaatcttacttagatttattagaaggaaaa
ccgtctacatattctccttttagacctggaatgactgctacagttgatattataaccaaa
actagagcaaatgttttggctgtgccaattagttctgttgttgtaaaagctgatacagcg
tcggtaaaagattttaaagttgacaatcttgatgaagataaaaagacagctccgaaaagt
gataaaaagttcgaatgtgtttttgtaaaagtaggagataaagccaaaatcagaattatc
aaaaccggaattcaggacgataccaatattgaggtcatgtcaggattacaaccgggagat
gtagtgattactgggccttataccacagtttctaaagatcttaactcaggagataaagta
aaacttaaaaaagcagaaacgcctaagaagtag
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