Flavobacterium flavipigmentatum: LNP22_08495
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Entry
LNP22_08495 CDS
T10330
Name
(GenBank) DEAD/DEAH box helicase
Organism
ffv Flavobacterium flavipigmentatum
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ERCC3_RAD25_C
DUF7517
Motif
Other DBs
NCBI-ProteinID:
UFH40302
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All DBs
Position
complement(1879563..1882472)
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AA seq
969 aa
AA seq
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MEPSKSFQFCFDIGLDKNLDTYIPTAYILEHTDEIKYLNKKASPDVLESFGIVFENLDAS
TKKILTVCESLKSEFIFKKFNVKMKSAKTIADLQKDAKIEFAIRQHLKTNLNIFYTLIVE
EKFPLSVNMGVEKDFYRSRVATAALYLEPQIQFEKHSEGITYTLSLKENQTLFSPMDSSI
TILLDEPGWLIIDKKLGQLKDLNAKKLSPFLKKKSIEIPSKLVDTYFKNFIPEIAKKIDI
EATGFEIEHRDKITSCTLQSVYDFFKNCYYITLCFDYDGYLFDGNKTKTKHTFVDFSIPN
EPRIIQHKRNSDENLYTNKLLEIGLSKIKNELFGCSRDEEIHDPYANIHFIINHKEALKN
LGFTIENLKLESKEISTEKAIISSSTATTKEDWFDVKIIITSGTFSFSFSEIITNIKSKE
RLFLLPDGSYFLIPLEWLTKYSSLAKLAKTENGNLLLRKNNFAVLDAFPELKTTSTPIYN
AEYTASELLKATLRPYQIEGVKWLLGHFNSNLGACLADDMGLGKTLQTLAVLVAVQEQLG
FTTKTTNFDLFQNETVVEREPLKTLIVLPSSLVFNWYNEAQKFTPHFSKMQYVGNDRKLL
SHKLASSDLIFTSYNIVHRDIAILEKYNFRYLILDESQYIKNKNSKIFKAINQINTAHKI
ALSGTPIENSLDDLWSQMQFINPDILGSYAFFTENFKIPIEKKQDENSLAELRTLIQPYI
LRRTKEQVLKDLPELSEQIYYCNMDPEQEKLYEKEKSKARNFLLKTDGSSPDKISIINTL
MKLRQLSNHPKMIDNESEIDSGKYIAVTNYLENLVKGKQKTIIFSSFVTNLSFYTSWCKE
NKIDFCEITGETNTKKREQQVNQFQENENTLFFFISLKAGGVGLNITKASYVLFLDPWWN
PFAEKQGVARAHRIGQLNKVNVIRFISKNTVEEKIIKLQENKKLLSDSLLEESYISNEIE
ANLEYILSS
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
ttggaaccttcgaaatcatttcaattttgttttgacatcggtttagataaaaacctggat
acttatattccaaccgcttacattcttgaacatactgatgaaattaaatatttaaataaa
aaagcaagtccggatgtactggaaagttttggaattgtttttgaaaatttagatgccagt
acaaaaaaaatactcactgtttgcgagtctttaaaatctgagtttattttcaagaaattc
aatgtaaaaatgaaatcggcaaaaacaattgctgatttgcaaaaagatgccaaaattgag
tttgccattcgccagcatttaaaaacaaatttgaacatattttacactctgattgtagaa
gaaaaatttccattgtctgtcaatatgggcgttgaaaaggatttttatcgatcccgagtt
gctacagctgcgctttatttagaacctcaaattcaattcgaaaaacattccgaaggaatt
acatacacactttctttaaaagaaaaccaaacgttattttcgccaatggatagcagcata
actattcttttggatgaacctggctggttgattatcgacaagaaattagggcaattaaaa
gaccttaatgctaaaaaactctcgccttttttaaagaaaaaatcaattgaaataccctca
aaactagttgatacttattttaaaaattttattccagaaattgccaaaaaaatagacatc
gaagccaccggttttgaaatcgagcatcgcgataaaattacttcgtgtacgctgcaatct
gtttatgatttctttaaaaactgttattatatcacgctttgttttgattatgatggctat
ttatttgatggcaataaaacaaaaacaaaacatacttttgttgattttagtattccaaat
gaacccagaataattcaacacaaaagaaattctgatgaaaatttgtacaccaacaaatta
ctcgaaatcggactatcaaaaattaaaaatgaattgtttggttgcagtcgtgatgaagaa
attcatgatccgtacgccaatattcattttattattaatcataaagaagcgctaaaaaat
ctgggatttacaatagaaaatttaaaactcgaaagtaaagaaatcagtacagaaaaggct
attatttcctcttctacagcaacaacaaaagaagattggtttgatgtaaaaataatcatt
accagcggtacatttagttttagctttagcgaaattatcacaaacataaaaagcaaagaa
agactctttttgttgcctgacggcagttattttctgatccctttagaatggctcaccaaa
tacagttcgctagccaaattagccaaaactgaaaatggaaaccttcttttgcgtaaaaat
aattttgcagttttggatgcatttccggaactaaaaacgacctcaactccaatttataat
gcagaatatactgcctctgaattgctaaaagcgactttaagaccgtatcaaattgagggt
gtaaaatggcttttaggacattttaactcgaatttgggggcttgcctggccgatgatatg
ggacttggaaagacattacaaaccttagccgttctggttgccgtgcaagagcaattaggc
tttacaacgaagacaacaaactttgatttgtttcaaaatgaaactgttgtagaaagagaa
cctctaaaaaccttaatcgttttaccttcgtcacttgttttcaactggtacaacgaagct
caaaagtttacgccgcatttttcaaaaatgcaatatgttggcaatgacagaaaactattg
tcgcataagttggcttcatcagatttgatttttaccagctacaatattgttcaccgcgat
attgcaattttagaaaaatataatttccgttatttaattttagacgaaagtcaatacatt
aaaaacaaaaattctaaaatttttaaagcgattaatcaaataaatacggctcataagatt
gcattgagcggtacaccaatcgaaaattccttagacgatttgtggtcgcaaatgcaattt
atcaatccggatattttggggagttatgctttttttacagaaaattttaaaattccgatc
gaaaaaaagcaggacgagaatagtttggctgaattaagaacacttattcagccttacatt
ttaagaagaaccaaagaacaggttttgaaggatttaccagaactatcagaacaaatttac
tattgtaatatggatcctgagcaggagaaattatacgaaaaagaaaaatcaaaagcccgg
aattttttattaaaaacagacggttccagccctgacaaaattagcattatcaacactttg
atgaagttgagacaactaagcaatcacccgaaaatgatcgataacgagtctgaaattgat
tctggaaaatatattgcagtcaccaattatctagaaaatctggtgaaaggaaaacaaaaa
accatcatttttagctcctttgttactaatttgagtttttacacttcttggtgcaaagaa
aacaaaattgatttttgcgaaatcacaggggaaaccaataccaaaaaaagagagcagcaa
gtaaaccagtttcaggaaaacgaaaatactttattcttttttatctcgctaaaagctggc
ggcgttggactgaatattaccaaagcatcgtatgttttgtttttagacccttggtggaat
ccttttgctgaaaaacaaggagttgccagagcgcaccgaattggacaattaaacaaggtc
aatgttattcgttttatctctaaaaatacggtcgaagaaaagataatcaaattacaggaa
aacaaaaagctgctttcggattcgcttttagaagaaagctacatcagcaacgagatagaa
gccaatttagaatatattttaagctcttaa
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