Flavobacterium flavipigmentatum: LNP22_12240
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Entry
LNP22_12240 CDS
T10330
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ffv Flavobacterium flavipigmentatum
Pathway
ffv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LNP22_12240 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ffv03400
]
LNP22_12240 (priA)
Enzymes [BR:
ffv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LNP22_12240 (priA)
DNA repair and recombination proteins [BR:
ffv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LNP22_12240 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
Cas3-like_C_2
nSTAND3
AAA_30
Nrap_D6
AAA_19
PyrI_C
Zn_ribbon_RPAB4
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
UFH37505
LinkDB
All DBs
Position
2808739..2811189
Genome browser
AA seq
816 aa
AA seq
DB search
MFFVEVILPLSLAKTFTYRVSEAEFHFIKKGMRVAVPFGKSKIYTALVLDMHQNAPSLYD
AKEIHQILDEKPIATEIQIKHWLWVANYYMCGIGDVYRGAFPTGLLLENETIISHKTDVF
VDKNELSNDEFLVYEALQQQSSLKVQDIISILNKKNIFPILQTMIAKNIIVLEDEIKENY
KPKLIRYVKLHEKYESDEGLGRLLEILKGANKQKEIVLTYFQLSASEKKPITVKKLVETS
QSSAAIVKALIEKEVFEEYFLQHDRVSFAGKASEKQLQLSDAQEQAFNQIKENFAKKEVC
LLHGVTSSGKTEIYIKLIEEHLQTGKQVLYLLPEIALTTQLVSRLRHHFGDKVAVFHSKY
SNNERVEVWRQTLENADKAQIVIGARSALFLPFAHLGLLIVDEEHEQTFKQTDPAPRYHA
RDAAVVLANFHGAKVLLGSATPSIETYFNTQTEKYGLVTLSERYNNVRMPEIVLVDLKDK
HFRKRMTGHFSDLLIEEVAEALSLGEQVILFQNRRGYSPIIECMTCGHVPHCQQCDVSLT
FHKHKNQLRCHYCGYSIAKPSHCHSCSSIDLTTKGFGTEQIEQELMTLFPKAKTGRMDQD
TTRGKFGFEKIIDAFKNREIDILVGTQMLAKGLDFDNVSLVGIMNADNMLHHPDFRAFER
SFQMMTQVAGRAGRSEKQGKVVIQTYNPNHNTIQQVTTHNYIGMYKEQLYDRQIYKYPPY
FRIIKLTLKHRDFDKLKEGSMWLYQVLSQNLKMPILGPEEPAISRIRNEYIRTILIKIPQ
NEPLGNTKKTIQKMLNSFEAVAQYRAIKVAVNVDFY
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgtcgaagttattttaccgctttcactagccaaaacctttacgtaccgtgtt
tctgaggccgaatttcattttataaaaaaaggaatgcgtgtcgccgtaccttttggtaaa
agcaaaatctacaccgctttggtgctggacatgcatcaaaatgctccaagtttatatgat
gccaaagagattcatcaaattttagacgaaaaaccaattgctaccgaaatacagattaaa
cactggctttgggtggctaactattatatgtgtggtattggcgatgtgtatcgaggtgct
tttcccacaggattattattagaaaatgaaaccattatttcgcacaaaacagatgttttt
gttgataaaaacgaactttcaaatgatgagtttcttgtctacgaagccttgcagcaacag
agttcattaaaagttcaggatattatttcgatattaaataagaaaaatatttttccgatt
cttcaaaccatgatagccaaaaatatcattgttttagaagatgaaatcaaagaaaattac
aaacccaaactcattcgatatgtaaaattgcacgagaaatatgagtcggatgaaggttta
gggcgattacttgaaattctgaaaggagccaacaaacaaaaagaaatcgttctgacttat
tttcagttgagcgcttctgagaagaaacccattacggtaaagaaattggtagaaacgtct
caatcttccgctgcgattgtaaaagctttgatcgaaaaagaggtttttgaagagtatttt
ctgcagcacgacagagtttcttttgccggaaaagcttcagaaaaacaattgcaattgagt
gatgcacaggaacaagcttttaatcaaataaaagaaaattttgctaaaaaagaagtgtgt
ttacttcatggcgtaacgtctagcggaaagactgaaatttatataaaactaattgaagaa
caccttcaaacaggcaaacaagtcctgtatttgctgcctgaaattgcgcttacaacacaa
ttggtgtcacgtttgcgacaccattttggcgataaagtagccgtttttcattcgaaatat
agtaataatgaaagagtagaagtttggaggcagacactcgaaaacgcagacaaagctcag
attgtgataggagcaaggtctgcgttgtttttgcctttcgcccatttaggcctcttgatt
gttgacgaagagcacgagcagacttttaagcagaccgatcctgcaccaagataccacgcc
cgtgatgccgcggttgtattggctaattttcatggagccaaagtgcttttgggttcggca
acaccaagtatcgaaacgtattttaatacccaaactgaaaaatatgggttggtaaccctt
tcggaacgttataataatgtgcgaatgcccgaaattgttcttgtcgatttgaaagacaaa
cattttagaaaaagaatgacgggacattttagcgatcttttaattgaagaagtggcagaa
gcgctgtctttgggtgagcaggttattttgtttcagaacagaagaggttactcacctatt
atagagtgtatgacttgtggtcatgtgccgcattgccaacaatgcgatgtgagtctcact
tttcataaacataaaaaccaattgcgatgccattattgtggttattctattgccaaacca
agtcactgccatagttgttcgagtattgatttgacaacaaaaggcttcggaaccgagcaa
atagagcaagaactaatgacgctttttccaaaagccaaaacaggtcggatggatcaagac
acgactcgcggaaagtttggttttgagaaaataattgatgcttttaaaaatagagaaatt
gatattttggtaggaacgcaaatgttagccaaaggtttggattttgataatgtgagcctc
gtgggcattatgaatgcagataatatgctgcaccatcccgattttagggcttttgaacgc
agttttcagatgatgacacaggtggcaggaagagcgggacggtcagaaaaacaaggaaaa
gtcgttattcaaacctataatccaaatcataatacgatacagcaagttacaactcataat
tatataggtatgtataaggagcaattgtacgatcgtcagatttacaaatacccgccttat
tttagaattataaaactgacgttgaaacaccgtgattttgataaattaaaagaaggttcg
atgtggttgtatcaggttttaagtcaaaatttgaaaatgcctattttaggtccggaagaa
ccggcgattagtagaatcaggaatgaatatattagaacaattttgattaagattccgcaa
aacgagccattgggaaacacaaaaaaaactattcagaaaatgctgaatagttttgaggct
gtagctcagtacagagcaataaaagttgcggtaaacgttgatttttattaa
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