Flavobacterium flavipigmentatum: LNP22_15480
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Entry
LNP22_15480 CDS
T10330
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ffv Flavobacterium flavipigmentatum
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ffv03009
]
LNP22_15480
Enzymes [BR:
ffv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LNP22_15480
Ribosome biogenesis [BR:
ffv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LNP22_15480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UFH38130
LinkDB
All DBs
Position
complement(3612413..3613456)
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AA seq
347 aa
AA seq
DB search
MNNSIENLDLEDELFEHFRFEVPKGQAFLRIDKYLMNLIQNATRNKIQNAATEGNIFVND
IPVKSNYKVKPFDVVTVMLSHPPFENHILPEDLPINIVYEDEALLLINKEPGMVVHPGHG
NYTGTLVNALAHHFDNLPMNSSERPGLVHRIDKDTSGLLVVAKTEAAMTHLAKQFEAKTS
EREYIALVWGNVAEEEGTIEGNLARHLKDRMQMAVFADPEIGKPAITHYKVLERFGYVTL
ISCKLETGRTHQIRAHMKHIGHPLFNDERYGGHLILKGTTFTKYKQFIDNCFKALPRQAL
HAKTLGFVHPNTGEMMRFDTELPQDFQDCIEKWRNYGKTHTMDEEEN
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaataatagtattgaaaatttggatttggaagacgaattattcgaacatttcagattt
gaagtccctaaaggtcaagcgtttttgcgtattgataaatatttaatgaatttgattcag
aatgcgactcgaaataaaattcagaatgccgcaactgaaggaaatatttttgtgaatgat
attccggtaaaatcaaattataaagtaaaaccgtttgatgttgtaaccgtaatgctgtcg
catcctccgtttgaaaatcatattcttccggaagatcttccgataaacattgtgtacgaa
gacgaggctttattgctaattaacaaagagcccggaatggtagtgcatcccggtcacggg
aattataccggaactttggtaaatgcgttggcacatcattttgataatttgccaatgaac
agcagcgaacgtcccggtttggtacatcgaatagataaagatacatccggacttttggta
gtggccaaaacggaagccgcaatgacgcatttggctaaacaatttgaagctaaaacttct
gaacgcgaatatatcgcccttgtttggggtaatgttgcagaggaggaaggaactattgaa
ggaaatttggcaaggcacttgaaagatcgcatgcaaatggcggtttttgcagatccagaa
atcggtaaacctgccataacacattataaagttttggagcgttttggttatgtaactctg
atttcatgtaaattggaaaccggaagaacacaccaaattcgtgcgcacatgaaacatatt
ggtcacccgttgtttaatgacgagcgctacggcggtcatttgattctaaagggaactact
tttaccaaatacaagcaatttatagataattgttttaaagctttgccacgtcaggctttg
catgctaaaacattgggtttcgtgcatccgaatacaggtgaaatgatgcgttttgatacc
gaattaccacaagattttcaggattgtattgagaaatggcgtaattatggaaagacacat
actatggatgaagaagaaaattaa
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