Flavobacterium flavipigmentatum: LNP22_16050
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Entry
LNP22_16050 CDS
T10330
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
ffv Flavobacterium flavipigmentatum
Pathway
ffv00541
Biosynthesis of various nucleotide sugars
ffv01100
Metabolic pathways
ffv01250
Biosynthesis of nucleotide sugars
Module
ffv_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LNP22_16050 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ffv01005
]
LNP22_16050 (kdsB)
Enzymes [BR:
ffv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
LNP22_16050 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
ffv01005
]
Lipid A
LNP22_16050 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
IspD
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
UFH38233
LinkDB
All DBs
Position
complement(3775647..3776378)
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AA seq
243 aa
AA seq
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MKIIAVIPARYASTRFPAKLMQDLGGKTVILRTYEASVATNLFDDVFVVTDSDLIFNEIV
SNGGKAIMSVKEHESGSDRIAEAVASLDVDIVVNVQGDEPFTETGPLEQVLSVFRNDEEK
KIDLASLMREITDEDEINNPNNVKVVVDQSQFALYFSRSVIPYPRDKDVGVRYFQHIGIY
AFRKQALLDFYSLPMKSLEASEKLEQLRYLEFGKRIKMVETTHVGIGIDTAEDLEKARAI
LGV
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatagcagttattccggcacgttacgcatctacacgttttcctgccaaattg
atgcaggatttaggtggaaaaacggtaatattgagaacgtatgaagcctcggtggcaacc
aacttgtttgatgatgtatttgtagtaaccgactcagatttgatttttaatgaaattgtt
tcgaatggtggaaaagccattatgagcgtcaaagaacatgagtctggcagcgaccgaatt
gcagaggctgtagcaagtttggatgtagatattgtggtaaatgtgcagggagacgagcct
tttacagagacaggaccattagaacaagtgttgtcggtttttagaaatgatgaagaaaag
aaaattgatttagcatctttgatgcgcgaaatcaccgatgaagacgagattaataacccg
aataatgtaaaggtggtggtagatcagtcgcagtttgcactgtatttttcgcgttctgta
attccgtacccaagagataaggatgtgggcgtgcgctattttcagcatattgggatttat
gcttttcgaaaacaagcgcttttagatttttatagtttaccaatgaaatcgcttgaagct
tctgaaaaattagaacaacttcgctatttggaatttggaaaaagaatcaaaatggtagaa
actacgcatgtcggaattggaattgatacggctgaagatttagagaaagcaagagctatt
ttaggagtctaa
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