KEGG   Flavobacterium flavipigmentatum: LNP22_16160
Entry
LNP22_16160       CDS       T10330                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
ffv  Flavobacterium flavipigmentatum
Pathway
ffv03030  DNA replication
ffv03430  Mismatch repair
ffv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ffv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LNP22_16160 (dnaX)
   03430 Mismatch repair
    LNP22_16160 (dnaX)
   03440 Homologous recombination
    LNP22_16160 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ffv03032]
    LNP22_16160 (dnaX)
   03400 DNA repair and recombination proteins [BR:ffv03400]
    LNP22_16160 (dnaX)
Enzymes [BR:ffv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LNP22_16160 (dnaX)
DNA replication proteins [BR:ffv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LNP22_16160 (dnaX)
DNA repair and recombination proteins [BR:ffv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LNP22_16160 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNAX_ATPase_lid AAA_22 RuvB_N AAA_14 AAA_5 Rad17 AAA_30 RCF1-5-like_lid AAA_16 nSTAND3 DNA_pol3_gamma3 NTPase_1 AAA_19 AAA_24 DNA_pol3_delta_C AAA_7 RNA_helicase AAA_assoc_2 NPHP3_N AAA_18 NACHT AAA_28 Mg_chelatase Sigma54_activ_2 DUF815 GNAT_acetyltr_2 AAA_2 TsaE Viral_helicase1 dNK
Other DBs
NCBI-ProteinID: UFH38254
LinkDB
Position
3797336..3798421
AA seq 361 aa
MEQFVVSARKYRPQTFKDVVGQKAITNTLLNAIDSNHLASALLFTGPRGVGKTTCARILA
RKINQPGYDDPTEDFAFNVFELDAASNNSVDDIRSLIDQVRIPPQTGQYKVYIIDEVHML
SSAAFNAFLKTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRITVKDAKEHLAEVA
TSQGINFEDDALHIIAQKADGAMRDALSIFDRVVSYCGTNLTRQAVTENLNVLDYETYIS
ITDLLLENKIPDLLLAYNEILAKGFDGHHFIAGLASHFRDLLVSKTPATIALLEVGEQAQ
QMYGIQAQKCTQDFLLKGIDLANDCDLKYKLSQNQRLLVELCLMQLASITFDGEKKKLSN
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaacaatttgtagtatcggcccgtaaatatcgcccacaaacctttaaggatgttgta
gggcaaaaagccattaccaacactttgttaaacgccatcgatagcaatcaccttgcctct
gccctattgtttacaggacctcgtggagtaggtaaaacaacctgcgcacgtattttggct
cgaaaaataaatcagcccggatatgatgatccaactgaagattttgcttttaatgttttt
gaattggatgccgcttcaaacaactctgtcgatgacattcgaagtttgattgaccaagtt
aggattcctccgcaaacagggcaatacaaagtatacattattgacgaggttcacatgttg
tcttcggctgcttttaatgcttttttgaaaacattagaagaaccgcccaaacatgctatt
tttatcctagcaacaacagaaaagcataaaattattccaactattttatcgcgttgtcag
atttttgattttaagagaatcacagtcaaagatgccaaagaacatttggccgaagtagcg
acaagccaaggtataaactttgaagatgatgcattacatattattgctcaaaaggctgat
ggcgccatgcgtgacgctttgtctatttttgaccgtgtcgtttcgtattgcggaaccaat
ttaacgcgtcaggctgttaccgaaaatcttaacgttttagattacgaaacttacattagc
atcaccgatttacttttagaaaataaaattccagatcttttattggcgtacaacgaaatt
cttgcaaaaggttttgatggacaccattttattgcgggtctggcctcacattttagagac
ctcttggtaagcaaaacccctgcaaccatcgctttgcttgaagttggcgagcaagcgcag
caaatgtatggcatacaagcccaaaaatgtacgcaggattttttattaaaaggaattgac
cttgccaacgactgtgatttaaaatacaaactaagccaaaatcagcgacttctggtcgaa
ttatgtttgatgcaattggcctctatcacttttgatggagaaaaaaaaaagctgagcaat
tcataa

DBGET integrated database retrieval system