KEGG   Flavobacterium flavipigmentatum: LNP22_16210
Entry
LNP22_16210       CDS       T10330                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
ffv  Flavobacterium flavipigmentatum
Brite
KEGG Orthology (KO) [BR:ffv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ffv03016]
    LNP22_16210
Enzymes [BR:ffv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     LNP22_16210
Transfer RNA biogenesis [BR:ffv03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    LNP22_16210
 Prokaryotic type
    LNP22_16210
SSDB
Motif
Pfam: Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_4 Lactamase_B Cucumo_coat
Other DBs
NCBI-ProteinID: UFH38263
LinkDB
Position
complement(3806262..3807167)
AA seq 301 aa
MKLTILGCYAATPRTITNPTSQVLEIKNRLFLIDCGEGTQVQLRKNKIKFSKINHIFISH
LHGDHFFGLIGTISTFALLGRTTDLHIYGPKGVKEIIMLQLKLSNSWTTYELFFHELESN
ESQIIFEDSKVVVKTIPLKHRVYTNGFLFEEKLGERKLNVDAVQHYDIHTAYYQKIKNGG
DITLEDGTVIENEKVSFDPIPPLSYAFCSDTAYHEAILPIIKNVDVLYHEATFLQSEEAL
AQKTLHSTAIEAATIALKANAKQLVLGHYSTRYEGIERFKEEAKTIFPNVLLADDGSSFE
F
NT seq 906 nt   +upstreamnt  +downstreamnt
ttgaaactaaccatacttggctgttatgccgctactcccagaacaattaccaatccgact
tctcaggttttagaaataaaaaacaggttgtttttaatcgattgtggtgagggaactcag
gtgcaattgcgcaaaaataaaatcaagttttctaaaatcaatcatatttttatttcgcat
ttgcacggcgatcacttttttggattaatcggtaccatttcgacttttgcacttttagga
agaactaccgacctgcatatttacgggccaaaaggagtgaaggaaattattatgctacaa
ttgaaattatcaaattcctggactacttatgagctgttttttcatgaattagaatcgaac
gaaagccaaattattttcgaagacagtaaagtcgttgtcaaaactattccgctcaaacac
cgcgtttatactaatggctttttgtttgaagaaaaattgggcgaaagaaaactaaatgtt
gatgctgtgcaacactatgacattcatacggcgtattatcaaaaaataaaaaatggtggc
gatatcacgctcgaagacggaaccgtaatcgaaaacgaaaaagtatcattcgatccaatt
ccgccactgagttatgcattttgttcagacaccgcttatcacgaagccatacttccaatc
ataaaaaacgtagatgttttatatcacgaagctactttcttgcaatcagaagaagctttg
gctcagaagacattgcattcgacagcaatagaagccgccacaattgccttgaaagcaaac
gcaaaacaacttgttttaggacattattcgaccagatacgaaggtatagaacgttttaaa
gaagaggccaaaacaatttttccgaacgtgcttttggcagatgacggcagcagttttgaa
ttttag

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