Flavobacterium flavipigmentatum: LNP22_17065
Help
Entry
LNP22_17065 CDS
T10330
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ffv Flavobacterium flavipigmentatum
Pathway
ffv00061
Fatty acid biosynthesis
ffv00071
Fatty acid degradation
ffv01100
Metabolic pathways
ffv01212
Fatty acid metabolism
ffv02024
Quorum sensing
ffv04146
Peroxisome
Module
ffv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LNP22_17065
00071 Fatty acid degradation
LNP22_17065
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LNP22_17065
09145 Cellular community - prokaryotes
02024 Quorum sensing
LNP22_17065
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ffv01004
]
LNP22_17065
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ffv04147
]
LNP22_17065
Enzymes [BR:
ffv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LNP22_17065
Lipid biosynthesis proteins [BR:
ffv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LNP22_17065
Exosome [BR:
ffv04147
]
Exosomal proteins
Exosomal proteins of breast milk
LNP22_17065
Exosomal proteins of breast cancer cells
LNP22_17065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UFH38426
LinkDB
All DBs
Position
4046033..4047811
Genome browser
AA seq
592 aa
AA seq
DB search
MVSITRLFDFPYYQQENYNTEVALATKQNGVWEKTSSQEYIAKANAVSRALLRMGVQKDD
KIALITSNNRTEWNIMDIGILQTGAQNVPIYPTISEEDYEYILNHSGSMYCFVSDEEVLR
KVNLIKANVPTLKEVYSFNKIEDCKHWSELLTLGEDASNQSEVEARKNSITADDLATIIY
TSGTTGRPKGVMLSHRNIVSNVLDSAPRIPFDAGKSTALSFLPICHIFERMILYLYQYYG
VSVYFGESIEKISDNLKEVRPTVITAVPRLLEKVYDRIYAKGSELTGIKKKLFFWAIDLG
LRYEPYGANGGWYEFQLKIARKLIFSKWKEGLGGNLDLMVSGSAALQPRLARVFAAAEIP
VMEGYGLSETSPVIAVNDIRNKGFKIGTVGKVIRNVEVKIAEDGEILCKGPNVMMGYYKD
TEKTAEAMQGGYFHTGDIGEIDSEGFLKITDRKKEMFKTSGGKYIAPQLIENAMKQSRFI
EQIMVIGDGEKMPAAFIQPNFEFVKEWAKIHKIALGSTNAEIAANPEVVKRIDSEVETIN
EKFGNWEKIKRFELTPDVWSIDSGQLTPTLKLKRKIIKEIYKDLYAKIYDHN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaatcacacgcctttttgattttccttactatcaacaagaaaactataataca
gaagttgccttagccaccaaacaaaacggtgtctgggaaaagacttccagccaagaatat
attgcaaaagcaaatgctgtttcgagagcattattacgcatgggcgttcagaaagacgac
aaaatagcgttgatcacttcgaacaatcgtaccgaatggaacatcatggatattggtatt
ctacaaactggtgctcaaaatgtacctatatacccaacgatttctgaggaagattacgaa
tacatattaaaccatagtggcagcatgtactgctttgtttcggatgaggaagtgcttcgc
aaagtaaatttgattaaagccaacgtgccgactctgaaagaagtatattcttttaataaa
atcgaagactgtaaacactggtctgaattactgactcttggcgaagacgccagtaatcaa
agcgaagtagaagcgagaaaaaacagtattaccgctgatgatttggctactatcatttat
acgtctggaacaacgggcagaccaaaaggtgtgatgctttcgcaccgaaatattgtttcg
aatgtattggacagtgcaccaaggattccgtttgatgcgggcaaaagcacagcgttaagc
ttcttacctatctgtcatatttttgaaagaatgattttgtacctctatcaatattatggt
gtgtcggtttattttggagaatctattgaaaaaatcagtgataacttaaaagaagttcga
ccaactgtgattaccgctgtaccacgacttcttgaaaaagtttacgatagaatatacgca
aaaggttctgaattgacaggtattaagaaaaaactatttttctgggctattgatttaggt
ttgcgatatgagccatacggcgccaatggtggctggtatgaatttcagttgaagattgcg
agaaaacttattttcagtaaatggaaagaaggtttgggaggcaatcttgatttgatggtt
tctggaagtgctgctttacagcctcgtttggcgagagtttttgctgctgccgaaattccg
gtaatggaaggttacggtttatctgaaacttctcccgtaattgctgtaaatgatattcga
aacaaaggttttaaaattggaaccgtaggaaaagtgattcgcaacgtagaagtaaaaatt
gccgaagatggcgaaatcctttgcaaaggccctaacgtaatgatgggctattataaagat
accgaaaaaacagccgaagccatgcaaggaggttattttcatacgggagatattggcgaa
atcgacagcgaaggcttcctgaaaattaccgaccgtaaaaaagaaatgtttaagacttct
ggcggaaaatatattgcgcctcagttgatcgaaaacgcaatgaaacaatctcgctttatt
gagcaaattatggtaattggtgacggcgaaaaaatgccagcagcttttattcagcctaat
tttgagtttgtaaaagaatgggcgaagattcataagatagctttaggaagtaccaacgca
gaaattgctgcaaatcctgaagtagtaaaacgcattgacagcgaagtagaaactataaat
gagaagtttggaaactgggaaaaaataaaacgttttgagctcactccagatgtttggtct
atagacagtggccagctcactcctactcttaaactaaaacgtaagatcatcaaagaaatc
tacaaagatctttacgccaaaatctacgatcataattaa
DBGET
integrated database retrieval system
