Flavobacterium flavipigmentatum: LNP22_17470
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Entry
LNP22_17470 CDS
T10330
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
ffv Flavobacterium flavipigmentatum
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ffv02000
]
LNP22_17470
Transporters [BR:
ffv02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LNP22_17470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
DUF1348
Motif
Other DBs
NCBI-ProteinID:
UFH38502
LinkDB
All DBs
Position
4159606..4160925
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AA seq
439 aa
AA seq
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MKNILKYAFFFVAAITTVGCDDYLDVQPIGRVIPETLTDYRSVLTRGYEAFPKHKSLTTL
RGDEIILDQYSQDFAYFRDIYVWNDTNPDKITTSFQYDALYNTIFYANVIINDAAGKLEA
SADKDQLIGEAYALRAYSYFDLLNLFAKPYNAATAGTDKGVPLALKVDLEQAYTPESVAK
VYEQILSDKEEAKRLLTKDTQTKGLNYRFSKAAIYALESRIFLYQKEWTKAVEAANKALT
YKNTLVDLNATPVLTTSYDGVESILALEDVFSNNLKGAGYVSSDLLDAYDQTNDLRFGVY
FQKLGGDYVFRKGGELAQKCSFRASELYLTKAEASAQLSDLTTAKTTVLDFIKKRYKAAG
FNQLSIEIDAMNQTALLAFIAQERQREFAAEGHRWFDLRRTTQKSIKHTVIDQDYTLIQN
DPRYTLPFPQNARLNNPNL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatattaaaatatgcattctttttcgttgcagctataactacagtaggctgt
gatgattatctggacgtacagcctattggcagagtaatccctgaaacattaacagattac
agaagtgtacttacaagaggatacgaagcttttcctaaacacaagtcgcttactacatta
agaggtgatgaaatcatattagaccaatatagccaggatttcgcttatttcagagatatt
tatgtatggaatgatacaaaccctgataagattacaacaagttttcaatacgatgctctt
tacaataccattttttatgcaaatgttattattaatgatgcagcaggtaaacttgaagcc
tctgctgataaagatcaattaattggagaagcttatgctttaagagcttactcgtatttc
gacttattgaacttatttgcaaaaccttacaatgctgctacagcaggtactgataaaggt
gttccattagctttaaaagtagatttagagcaggcttatactccagaaagtgtcgctaaa
gtttacgagcaaattctttctgataaggaagaagctaaaagattgcttactaaagacact
cagactaaaggattgaactaccgtttttctaaagcagctatttatgcattggaatctcgt
attttcttataccaaaaagagtggacaaaagctgtagaagctgcaaacaaagcattaaca
tacaaaaatactttagttgatttaaatgcaactcctgtactaacaacaagctatgatggt
gttgaatctatattagcacttgaagatgttttttcaaataacttaaaaggagctggttat
gtttcttcagatttattagatgcttacgatcagacaaatgatttacgttttggggtatat
tttcaaaaacttggaggtgattatgtttttagaaaaggaggagaacttgctcaaaaatgc
tcttttagagcctctgaattatatttgacaaaagcagaagcttcagctcaattaagtgat
cttacaacggcaaaaactactgtattggattttatcaaaaaaagatataaagctgcaggt
ttcaatcagcttagtattgaaattgatgcaatgaaccaaacagcactacttgcctttatt
gctcaggaaagacagcgtgagtttgctgcagaaggacaccgttggtttgatttgagaaga
acaactcaaaaatcaatcaaacacacagtaattgatcaggattatacattaatccaaaat
gacccacgttatacactgccattcccacagaatgcacgtttaaataatccaaacttgtag
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