KEGG   Flavobacterium flavipigmentatum: LNP22_18115
Entry
LNP22_18115       CDS       T10330                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ffv  Flavobacterium flavipigmentatum
Pathway
ffv03030  DNA replication
ffv03430  Mismatch repair
ffv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ffv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LNP22_18115
   03430 Mismatch repair
    LNP22_18115
   03440 Homologous recombination
    LNP22_18115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ffv03032]
    LNP22_18115
   03400 DNA repair and recombination proteins [BR:ffv03400]
    LNP22_18115
Enzymes [BR:ffv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LNP22_18115
DNA replication proteins [BR:ffv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LNP22_18115
DNA repair and recombination proteins [BR:ffv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LNP22_18115
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2 TMEM95
Other DBs
NCBI-ProteinID: UFH38624
LinkDB
Position
complement(4292868..4293638)
AA seq 256 aa
MELKLNKPICFFDLETTGIDIGKDRIVEISILKVFPNGNKESKTWLVNPTIPIPPQTTAV
HGITDEKVANEPTFNELAPQVYNMIKDSDLGGFNSDRFDIPLLAEELLRAGVDFDMKNKV
SVDVQTIFHKMEERTLSAALKFYCGKSLENAHSAEADTMATYEILKAQLDRYPELENDMK
SLSEFTTRKKIADFAGMIAFDNDNEEIFTFGKHKGAKVDKVLQTEPGYFSWIQNADFPLY
TKKVLTAIKLRKLNTK
NT seq 771 nt   +upstreamnt  +downstreamnt
atggaactgaaactcaacaaaccaatttgcttttttgatcttgaaacaacgggaattgat
attggaaaagataggatagtagaaatttcgatattgaaagtttttccaaacggaaataaa
gaaagtaaaacatggttggtgaatccgactattccaattccgccgcaaacaacggctgtg
cacggtattacagatgaaaaagtagccaatgaacctacttttaatgagttggctccgcaa
gtctataatatgattaaagacagcgatttgggtggattcaattcggatcgttttgatatt
ccgttgctggcagaagaattactgcgtgccggagttgattttgatatgaaaaataaagtc
tctgtcgacgtgcagacgatctttcataaaatggaagagcgcacgctgagtgccgcatta
aaattttactgcggaaaaagcctcgaaaatgcgcattcggcagaagctgatacaatggcg
acttacgagattttaaaagcacaattagatcgttatcctgaattggaaaatgatatgaaa
tccttgtcagaatttacaacccgaaaaaagatcgccgattttgcaggaatgatcgctttt
gataatgataacgaagaaatttttacttttgggaagcacaaaggcgcaaaagtagacaaa
gtgctgcaaaccgaaccaggatattttagctggattcaaaatgctgattttcctttgtat
accaaaaaagtcctgacggctattaaattaagaaaattaaatacgaaataa

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