Fulmarus glacialis (Northern fulmar): 104069383
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Entry
104069383 CDS
T08370
Name
(RefSeq) LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03430
Mismatch repair
fga03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104069383
03460 Fanconi anemia pathway
104069383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fga03400
]
104069383
DNA repair and recombination proteins [BR:
fga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104069383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
Motif
Other DBs
NCBI-GeneID:
104069383
NCBI-ProteinID:
XP_009570536
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
LKPAKAIKPIDRKSVHRICSGQVVLNLGTAVKELVENSLDAGATNIDIKLKDHGAELIEV
SDNGGGVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSDVTIFTCHKS
AKVGTRLAFDHNGKITQKTPFPRQQGTTVNIQQLFYTLPVRHKEFQRNIKKVGICKNGXQ
VLQAYCIVSKGVRINCTNQVGQGKKSSVVSTTGSPSLKENIGAVFGQKQLQSLMPFVQLP
PNEAVCEEYGLNATDMPQNLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLV
NEVYHLYNKHQYPFVVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLTEMFGSD
VNKLNVNQKLLDIAGNLKKMLPEETEKPQVEMLPDSETENPTGEGKRIMTLARLRESFSL
HQTTESNFQSPKKVKQQHSSPRQMSLDTTLRTVKTQKAVLSKESESCHKMDSKMSIPSRY
LRKLEDNADSGFCSTSESDAGCSIPEPGSCVNSESVINPPEEEFCSSEEQLQNDCLKTVG
CSEKSLECDVQVLGTEHRLNQVNDWTNQNKLPQEANSSSPRIKCFKSRSFKGKADDFKAG
KCPEVKNTRNYMPSVDVLVEVKKKTVPLEFSMKVLAEKVKKLIHQQQKSTETQNYRRFKA
KISPGENKVAEDELRKEISKEMFAKMEXHWPVQFRVYNSKVESDLFIIDQHATDEKYNFE
MLQQHTVLQGQKLIVPQNLNLTAVNETVLIENLEIFRKNGFDFVINEN
NT seq
2306 nt
NT seq
+upstream
nt +downstream
nt
cctgaagcctgccaaagccatcaagcccatcgaccgtaagtccgttcatcggatctgttc
gggacaggttgtgctgaaccttggtactgccgtgaaagagttggtggaaaacagcctgga
tgctggagctaccaacattgacataaaacttaaagatcatggagcagaactgatagaggt
ttcagataatggaggtggagtggaagaggaaaactttgaaggcttgactctgaaacatta
cacatcaaagatacaagatttttctgatctaatacatgttgaaacatttgggtttcgagg
tgaagctctgagttcactatgtgcattaagtgatgttaccatttttacctgtcataagtc
tgcaaaggttgggactcgtttggcatttgatcacaatggtaaaattactcagaaaactcc
ttttccacgacaacaaggaacgactgttaacatacagcagttattttatactttgccggt
gcggcataaggaatttcaaagaaacattaaaaaggtaggaatatgcaaaaatggtnncca
ggtattgcaggcgtactgtattgtttcaaagggagtgcggatcaactgcactaatcaagt
tggccaagggaaaaaaagctctgtggtatccactactggaagtcctagtttaaaggaaaa
cattggagcagtatttgggcaaaaacagttgcagagcctcatgccttttgttcagctacc
tcctaatgaagctgtttgtgaagaatatggactcaatgctactgacatgccacaaaatct
ttatagtattacaggcttcatttctcgttgtgatcatggtgttggaaggagtacaacaga
cagacagtttttctttatcaaccaacgtccatgtgatccagcaaaggttgtcaagcttgt
gaatgaagtgtatcacttatacaataaacaccagtatccatttgttgtccttaacatttg
tgtagattctgagtgtgttgacatcaatgtaactccagacaaaaggcaaattttacttca
ggaggaaaaacttttattagcaattttaaaaacttctctgacggagatgtttggtagtga
tgtcaacaaactgaatgtcaatcaaaaacttctggacattgcaggcaacttgaagaagat
gcttcctgaagagacagaaaagcctcaggtagaaatgctgcctgactctgagactgaaaa
tccaactggtgaaggaaaaagaataatgactcttgccagattaagggagtcattctctct
ccatcaaacgacagagagtaattttcaaagccctaaaaaggtaaaacagcagcacagctc
ccctagacaaatgtcacttgataccactttgcgtaccgtaaagactcaaaaggctgtctt
gagtaaggagtctgagagttgtcacaagatggactcaaagatgtcaattccaagcagata
tttgagaaaattagaagataatgcagattctggattctgtagcacttctgaatcagatgc
cggatgtagtataccagaacctgggagctgcgtcaatagtgaaagtgtaattaatcctcc
tgaagaagaattctgtagctcagaagaacaacttcagaacgattgtcttaaaactgttgg
atgtagtgagaaatcattggaatgtgatgttcaggtcttgggcactgaacataggttaaa
tcaagtgaatgactggactaatcaaaataagttacctcaagaagccaatagttcttcccc
aagaataaaatgttttaaaagcagaagctttaaaggtaaagcagatgacttcaaggcagg
taaatgtcctgaagtgaagaatactaggaactatatgccaagtgttgatgtactggtgga
agttaaaaaaaaaacggtgccacttgaattctctatgaaggttttagcagaaaaggtaaa
aaagctaatacaccaacaacagaaaagtacagaaacccaaaattacagaagatttaaagc
aaaaattagtcctggagaaaataaagtagcagaagatgaattaagaaaagagatcagtaa
agaaatgtttgcaaaaatggaanatcattggccagttcaatttagggtttataatagcaa
agttgaatcggatcttttcataattgaccaacatgctactgatgagaaatacaactttga
gatgttacaacaacacactgtccttcaaggtcagaagctgatagtgcctcaaaatctcaa
tttaacagctgtaaatgaaactgtattgattgaaaacctggaaatattcagaaaaaatgg
gtttgattttgtcataaacgaaaatg
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