Fulmarus glacialis (Northern fulmar): 104069430
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Entry
104069430 CDS
T08370
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104069430 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fga03041
]
104069430 (PRPF8)
Spliceosome [BR:
fga03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104069430 (PRPF8)
Complex C
U5 SnRNP specific factors
104069430 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
104069430
NCBI-ProteinID:
XP_009580211
LinkDB
All DBs
Position
Unknown
AA seq
2320 aa
AA seq
DB search
SPLAPLPDYMSEEKLQEKARKWQQLQGQRYAEKRKFGFVDAQKEDMPPEHVRKIIRDHGD
MTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLYHITGAISFVNEIPWV
IEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQLEL
DPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYRLANQLLTDLVDDNYF
YLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDINKIIIRQPIRTEYKIA
FPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPISHRHSVKSQEPLPDDD
EEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRRALDIPLVKNWYREHC
PAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQ
VCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLTK
LVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYR
FNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQ
RVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPI
ENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYL
KDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSR
LNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLE
KITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGINNLQDVWETSEGECNV
MLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQ
FASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATEVAHPIRLFCRYIDRI
HIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFW
DIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKCRTSYEEFTHKDGVWN
LQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFR
EAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLI
PQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQE
AIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWW
THQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKW
KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQ
IFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASY
KWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIY
PSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYS
SEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTG
QLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVH
LLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSR
LILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKKN
NVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEII
TSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFI
CISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKEMEPL
GWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGY
EWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWNYNFMGVRHDPNMKYE
LQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
6963 nt
NT seq
+upstream
nt +downstream
nt
agcccgctggcgccgctgcccgactacatgtctgaggagaagctgcaggagaaagcccgc
aagtggcagcagctgcagggccagcgctatgcggagaagaggaaattcggcttcgtggac
gcgcagaaggaggacatgccccccgagcacgtccgaaagatcatccgcgaccacggcgac
atgaccaacaggaagttccgtcacgacaagcgcgtctacctgggtgctctgaagtacatg
cctcatgctgttctgaagcttttggagaacatgcccatgccctgggagcaaatcagagat
gttccggtcttgtaccatatcacaggcgccatctctttcgtgaatgagattccctgggtc
atagagccggtgtacattgctcagtgggggtcgatgtggattatgatgaggcgagagaag
agggataggcgtcacttcaagaggatgagattccccccgtttgatgatgaagaaccccct
ctggattatgctgataacatcctggatgtggagcccctggaagcgattcagcttgagctg
gatccagaggaggatgcccctgtgctggactggttctatgaccaccagcccctgaaggac
aacaggaagtatgtaaatggttcaacgtaccagcgttggcagttcactctcccgatgatg
tccacgctgtaccggctggccaatcagctgctcactgatcttgtggatgacaactatttc
tatttgtttgacctgaaagcattctttacctccaaggcactgaacatggctattcctgga
ggtcccaagtttgagcctcttgttagagacatcaatcttcaggatgaagactggaatgaa
tttaatgacatcaacaaaattatcatcaggcagccgatcaggacagagtacaaaattgct
ttcccatacctgtacaataacctgccacaccatgtccacctcacctggtatcatactcca
aacgtcgtgttcattaaaacagaggatcctgatctcccagctttttacttcgatccactg
atcaaccccatttcacacagacactctgtcaagagtcaggaaccgttgcctgatgatgat
gaagagtttgagttgccagagtttgtggaacctttcctgaaggataccccgctctacaca
gataacacagccaatggcattgccctgctgtgggccccacggcccttcaacttgaggtct
gggaggactcggagagctcttgatatcccactggtcaagaactggtatcgtgagcactgc
ccggcaggccagccagtgaaagtacgagtctcctatcagaagctactgaaatactatgtt
ctaaatgcgcttaagcacagaccccccaaggcccagaagaagaggtacctgttccgctcc
ttcaaggctacgaagtttttccagtcaacgaagctggactgggtggaagtaggcctgcaa
gtgtgtcgccagggctacaatatgctgaacttgctgatccacagaaagaacctgaactac
cttcacttggattacaacttcaacctgaagcccgtgaagaccctcaccactaaggaaagg
aaaaaatctcgtttcggtaatgctttccatctgtgccgagaggttctgcggctgactaag
ctggtggtggacagccatgtccaatacagacttggaaatgtggatgcgtttcagttggca
gatggcttgcagtacatctttgcccatgtgggtcagctgacaggaatgtaccgatacaag
tacaaactgatgaggcagattcgtatgtgcaaggacctgaaacatctcatctactacagg
tttaacacagggcctgtgggcaaaggtcctggctgtggcttctgggctccaggctggaga
gtatggctgttcttcatgaggggcatcacgccactactggaacgctggctggggaatctg
ctggccaggcagttcgaaggccgtcactcaaagggtgtagcaaagactgtcacaaagcag
cgtgtggagtctcactttgacctggagctgagggcagccgttatgcatgacattctggac
atgatgccagaaggaatcaaacagaacaaagccagaaccatcctgcagcatctgagcgag
gcttggcggtgctggaaggctaatatcccctggaaggtgccagggctgccaactcctatt
gagaacatgattctgcggtacgtgaaggcaaaagctgactggtggacaaatacagctcac
tacaacagggagcggatccgtcggggtgccactgtggacaaaaccgtctgtaagaagaat
ctgggccggctgaccagactctacttaaaagctgagcaggaacggcagcataattacttg
aaggatgggccttacatcactgcggaagaggctgttgctgtgtacacaaccacggtgcac
tggctggaaagcaggaggttctcacccattcccttccccccgctgtcctacaagcatgac
accaagttgctcatattagccctggagaggctgaaggaagcttacagtgtgaaatctcgc
ctgaatcagtcgcagagagaggagttgggcttgattgaacaggcttacgataatcctcat
gaagctctgtccagaatcaaacgacaccttttaactcagagagccttcaaggaggtgggt
attgagttcatggatctctacagccacttagttcctgtttatgatgttgagcccctggag
aaaatcacagatgcttatctggatcagtacttgtggtatgaggccgataagcgacgactc
ttccctccgtggatcaaacctgctgacactgaacctcctccactcttggtgtacaagtgg
tgccaaggcattaataatcttcaagatgtttgggaaacgagtgaaggtgaatgcaatgtg
atgctggaatctcgatttgagaagatgtatgagaagattgacctgacgttgctcaacagg
ctgttgcgtcttattgttgatcacaacattgctgactacatgacagccaagaacaacgtg
gtgatcaactacaaggacatgaatcacacaaactcctatgggatcattcgtgggctgcag
tttgcttccttcattgtccagtattatgggcttgtgatggacctgctggtgctgggtctg
caccgtgccagtgaaatggctgggcctccccagatgccaaatgacttcctcagcttccaa
gacattgccactgaggtggcccatcccattcgcctcttttgcagatacattgaccgtatt
cacatcttcttcaggtttacagcagatgaggcaagagacttgattcagcggtacctgaca
gagcatccagatcccaacaatgagaacattgtaggctacaacaacaagaagtgctggccc
cgggatgctcggatgcgcctcatgaaacatgatgtgaaccttggtcgtgctgtattctgg
gatatcaagaaccgtttgcctcgatcagtcaccacggtgcagtgggagaatagcttcgta
tccgtttacagcaaggataaccccaatttgctgttcaacatgtgtgggtttgagtgccgc
atcttgcctaagtgccgtaccagctacgaggagttcacccacaaggatggtgtctggaac
ctgcagaatgaggtcaccaaggagcgcacagctcagtgcttcctgcgtgtggatgatgag
tctatgcagagatttcacaacagagtgaggcagatcctcatggcatctggctccacaacc
ttcactaagattgtcaataaatggaatacagctctgattggcttgatgacatatttccgg
gaagctgttgtaaatactcaggagttgcttgatttgctggtgaagtgtgaaaataaaatc
cagactcgaatcaaaattggtctgaattccaaaatgccgagccgttttccaccagtggtg
ttttacacccctaaagagctgggagggctgggcatgctctccatgggccacgttctcatc
ccgcagtctgacctgaggtggtccaagcagacagatgttggcatcactcacttccgctca
ggaatgagtcatgaggaggaccagctcatcccaaatttgtatcgttacatccagccatgg
gagagtgaattcattgactctcagagagtatgggcagagtacgccctcaagcgacaagag
gctatagcccagaacaggcgtctgacactggaggatctggaggactcatgggacagggga
attcctcgtattaacacccttttccagaaggaccggcataccttagcttatgataaagga
tggagagtcaggaccgacttcaaacagtatcaggtcctgaaacagaacccgttctggtgg
acacatcagcgccatgacggcaaactctggaacctgaacaactaccgcacagatatgatc
caggcacttggtggagtggaaggaatcctggagcacactctcttcaagggcacttacttc
cccacgtgggagggtctcttctgggaaaaggccagtggctttgaggagtccatgaagtgg
aagaagctgacaaatgctcagagatcgggtttgaaccaaattccaaacagaagattcacc
ctgtggtggtctcctaccattaacagagccaacgtatatgttgggtttcaggtgcagctg
gatttgacaggcatctttatgcacggcaagatccccacgctgaagatttctctcattcag
attttccgagctcacttgtggcaaaagatccatgaaagcattgtaatggatttgtgtcag
gtgtttgatcaagagctggatgctctggagattgagacagtgcagaaagagacgatccat
cccaggaagtcatacaagatgaattcctcatgtgcagatatccttctctttgcttcctat
aagtggaatgtgtcacgtccatcattgctcgcagattccaaagatgtgatggacagcacc
accactcagaagtactggatagatatccagctgcgctggggagattacgattcccatgat
atcgagcgctatgcaagagccaagttcctggactacactacagacaacatgagtatctat
ccatctcctactggtgtgctcattgccattgatctcgcctataacttgcacagtgcttat
gggaactggttccctgggagcaaacctctgatccagcaggctatggccaaaattatgaaa
gcaaatcctgcgctgtatgtgttgagagaacgaatccgcaaggggttgcagctgtactca
tctgagcccacagaaccatacctttcctcccagaactatggagagctcttctccaaccag
atcatctggtttgtggatgacaccaatgtgtacagagtgaccattcacaagacttttgaa
gggaatttgaccacaaaacctatcaatggagccattttcatcttcaatcccagaactgga
cagctcttcctgaagatcatccatacatctgtgtgggcaggacagaagcgtctaggacag
ctggccaagtggaagactgctgaagaagtggctgccttgattcggtcacttcctgtggag
gagcagcctaagcagatcatagtgactcggaaggggatgttggacccacttgaggtgcac
ttgctggatttccccaatattgtgatcaaaggctcagagttgcagctgcccttccaggcc
tgtctgaaagtggaaaaatttggtgatctcatcctgaaggctactgaaccccagatggtt
cttttcaatctctacgatgactggctgaaaaccatctcttcctacacggcattctctcgt
ctgattctgattctccgggcactacatgtgaataacgatcgagccaaagttattctgaaa
ccagacaagacaaccataacggagcctcaccacatctggccaaccctgacagatgaggag
tggatcaaggtggaggtgcagctgaaggatctcatccttgctgactatggcaagaagaac
aatgtcaatgttgcgtccctgacgcagtcagagatccgagacattatcctgggcatggag
atctctgccccgtctcagcagagacagcagattgcagaaattgagaaacaaaccaaggag
cagtcacaactgacagccacgcagacccgcactgttaacaaacacggggatgaaatcatc
acctctacaaccagcaactacgaaacccagactttctcctccaagactgagtggcgagtc
agagcaatttctgctgccaacctccacctgcgaacaaaccacatttatgtttcatcagac
gatataaaggaaacgggctatacctacattcttcccaagaatgtgttgaagaaattcatc
tgcatctcagatctgcgggcccagattgcaggttacctgtatggagtgagccctcccgat
aacccccaagtgaaggagatccggtgcattgtaatggtgccccagtggggaacacaccag
accgtgcatctcccggggcagctgccgcagcatgaatatctcaaggaaatggaacctctg
gggtggattcacacccaaccaaacgagtcccctcagctctcgccacaggatgtcaccacc
catgccaaggtcatggccgacaacccctcctgggatggggagaagactatcatcatcacc
tgcagttttacgccaggctcctgcacgctgacagcctacaaactgaccccgagcggctac
gagtggggcaggcagaacacggacaaagggaacaaccccaagggctacctgccatcccat
tacgagagggtgcagatgctgctgtcagatcgcttcctcggcttcttcatggtcccagcg
caagggtcctggaactacaactttatgggtgttcgccacgaccccaacatgaagtacgag
ctgcagctcgccaaccccaaggagttttaccacgaggtccatcgcccttctcatttcctc
aacttcgccctgctgcaggagggggaggtctactccgccgaccgggaggacctctacgcc
tag
DBGET
integrated database retrieval system
