KEGG   Fulmarus glacialis (Northern fulmar): 104069493
Entry
104069493         CDS       T08370                                 
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
fga  Fulmarus glacialis (Northern fulmar)
Pathway
fga03440  Homologous recombination
fga03450  Non-homologous end-joining
fga04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:fga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    104069493 (RAD50)
   03450 Non-homologous end-joining
    104069493 (RAD50)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    104069493 (RAD50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fga03032]
    104069493 (RAD50)
   03400 DNA repair and recombination proteins [BR:fga03400]
    104069493 (RAD50)
DNA replication proteins [BR:fga03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    104069493 (RAD50)
DNA repair and recombination proteins [BR:fga03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     104069493 (RAD50)
    BRCA1-C complex
     104069493 (RAD50)
   NHEJ (non-homologous end-joining)
    MRX complex
     104069493 (RAD50)
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook SMC_N AAA_21 AAA_15 SbcC_Walker_B DUF2703 NPV_P10 AAA_29 AAA_13
Other DBs
NCBI-GeneID: 104069493
NCBI-ProteinID: XP_009578889
LinkDB
Position
Unknown
AA seq 1312 aa
MSKIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKTEFKTLEGVITR
TRHGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQSLKVRECQTELKYLKQNKEKAQEIQDHLSNREAQLAASKEN
VKSIESQLDPLKSSLAVVEQNLIKVMRLDNDIKALESRRRQMEKDNQDLQQKMEKVFQGT
DEQLRDRYQNHQRTVKEKEKRLSDCKRELDRATKECQRFNSEKSELLIERGRLQLQADRH
QEHITTRDSLIQSLAAQLELDGFERAPFNERHITSFHRLLKERQERDTEAANHLMREFAR
KEAMKQKQIDEIRDKKTGLERTIDLKSDIQNKKQVELKNVKYELQQLEGFSDRILELDQE
IVKTEHELEKAERNSNVETLELEVQTLQNEKINLDKALRKLDQEMEQLNLHTTTITQMDM
LKKDKADKEEQIRKVKSRHSDELTSLLGYFPNKNQLEDWLHDKNKKINQTRDNLAGLNKR
LASVEYHKTYVSNELRKKEAQLSLHEAKLFDVCGSQDFDSDLNKLQDEIEKSSKQRAVLA
GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RKEKKRDEMMSLKPLRRTVVELQDRDIPDLRNKIQNANRDLTGLKGEIEEQESALQTALS
KEESAKARLQDITLMERYQTDIRDVERKIAQQEAKLLGVDLSRTVLQVSQEKQEKKHLWD
TVTGKIELNQKLKQDQQNQIQQLKSTVNELKAEKLQISSSMQRRRQLEEQTVELTTEFQS
LCREIKEAKEQAFPLDATLEKLQQEKEDLMNKRTASNKETQEKINGIKEKVKDINKYVKE
IENYIQQGKEDYKKQKESELEEVNSQLAACEKRKEMISKEMEMIRQDIDTQKIQERWLED
NLTLRKRNEELKEVEDNVKHLVKEMGEMKVPQMKNEQKHLEEKIESLKRNHHVALGRQRG
FEEEIVRFKKELRESQFRDAEEKYRDMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQCSEIMKCSVSSLGSYVH
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgtcgaagattgagaaaatgagtattcttggagtgaggagttttggggtagaggataaa
gacaaacaaattatcactttctttaatccgttaactattttagtgggaccaaatggtgca
ggaaaaacgactatcattgaatgtcttaaatatatatccactggagattttcctcctggc
accaaaggaaactcatttgttcacgatccaaaggttgccaatgaaacagatgttagagct
cagattcgattgcagtttcgagatgtaaacggagagctcgtagctgtccagcgatccatg
gtctgtacccagaaaggcaagaaaacagaatttaaaacacttgaaggtgtcattactaga
acaaggcatggcgagaaggtcagtctgagttccaagtgtgcagaaattgatcgagagatg
atcagcgcccttggtgtttccaaatcggtgattaacaatgtcattttctgccaccaagaa
gaatccaactggccattaagtgaagggaaggccctgaaacaaaaatttgatgagatcttt
tcagcaacaaggtatattaaagcactggaaactctccgtcaggtacgactgaaacaaagc
ttgaaagtaagagagtgtcagacagaactgaaatacctaaaacagaataaagaaaaagca
caggaaatccaggatcatcttagcaatagagaggctcaactggctgcttctaaggagaat
gtaaaatctattgagagtcaacttgatcctctaaagagttctctggcagtagttgaacag
aatctcataaaagtaatgaggctagacaacgacataaaagccctggagagcaggaggaga
cagatggagaaagataatcaagatctgcaacagaagatggaaaaggtttttcaaggaaca
gatgaacaactaagagatagataccagaaccaccagaggacagtgaaggagaaagagaag
agattatcagactgtaagcgtgaattagatagagccactaaagaatgccagagatttaac
agtgagaaatcagaactacttattgaacgaggtcgtcttcaactacaagcagatcgtcac
caagaacacatcacaacgagggattcattaattcagtctttggcagcacagctggaatta
gatggttttgagcgagcaccttttaatgaaaggcacattactagtttccacaggttgttg
aaggagagacaggaaagagatacagaagctgcaaatcatttgatgagagaatttgcacga
aaagaagcaatgaaacaaaaacagatagatgaaataagagacaagaaaactggattagaa
agaaccattgacctgaaatcagacattcaaaataagaaacaagttgaactgaagaatgta
aaatatgaattgcagcagttggaggggttttcagacagaattctggagttggatcaggag
attgtcaagacagaacatgagcttgagaaggctgagaggaacagcaatgtagaaacactc
gaactggaagttcaaactctgcaaaatgagaaaataaacctggacaaagctcttaggaag
ttagatcaagagatggaacagttgaatctacataccacgacaattacccaaatggacatg
ctaaagaaagacaaagcagacaaagaggagcagattagaaaagtaaaatcaagacattct
gatgaactgacatcactgttgggatactttccgaataaaaaccaacttgaagactggctt
catgataaaaataaaaagattaatcagacaagggataatcttgctggccttaacaaacga
ctggcatctgtagaatatcataaaacttatgtcagtaatgagctaagaaaaaaagaagca
cagttgtcccttcatgaagcaaaactttttgatgtttgtggaagccaagattttgacagt
gatctgaacaaacttcaagatgaaattgaaaaaagttcaaaacagcgagctgtgcttgct
ggagccactgcagtttattcacagttcattacacaattgacagaggagaaccagtcatgt
tgtccagtttgtcaaagagtttttcaaacagaggccgaactgcaagatgtaattagtgat
ctgcagtctaagctgcgtcttgctccagacaaactgaagtcaacagagtctgagcttaaa
agaaaagagaagaaacgtgatgaaatgatgagtcttaaaccacttcggcgaactgtagtt
gaactccaagatagggacataccagacttgaggaacaagatacagaatgcaaacagggat
ttaacaggcctgaagggtgagatagaagaacaggaatcagccttgcagacagctttgtct
aaggaggaaagtgccaaggcgcgtttacaggatataacactaatggaaaggtaccagact
gatattagggatgttgaacgaaaaattgctcagcaggaggctaagctgctaggggtcgat
ttaagtagaactgttctacaagtaagccaagaaaaacaagagaaaaaacacttgtgggat
acagttactggtaaaattgagttaaatcaaaaactcaagcaagaccagcaaaatcagatt
cagcagctaaagagtacagttaatgagcttaaagcagagaaacttcagatttccagcagc
atgcagcgtcgtcgacaactggaggagcaaacagtggaattaactactgagtttcagtcc
ttatgcagagagatcaaggaagcaaaagaacaggcatttcctttggatgccactttagaa
aaactgcagcaggagaaggaggatctaatgaataaaaggactgcaagtaataaagaaaca
caagagaagataaatggcataaaagagaaagttaaagatataaacaagtatgtgaaagaa
attgaaaactatattcaacaaggaaaagaagactataaaaagcaaaaagagtctgaactt
gaagaagtaaattctcagttagctgcctgtgagaaacggaaggaaatgataagtaaagag
atggaaatgattcgacaagatattgacactcaaaagatacaggaaaggtggctagaggat
aatcttactttgaggaaacggaatgaagagctaaaagaagttgaagacaatgtaaaacac
cttgtgaaggagatgggagaaatgaaagtcccgcaaatgaaaaatgaacaaaaacattta
gaggagaaaatagaatctctgaaaagaaaccatcatgttgcacttggccgacaacgtgga
tttgaggaagagattgttcggtttaaaaaggaacttcgagagtcacaattcagagatgca
gaggagaaatacagggatatgatgattgttatgagaacaacagagctggtgaacaaagat
ctggacctttattacaaggctcttgataaagcaataatgacatttcatagcatgaagatg
gaagaaattaacaaaataatacgtgacctttggcgaagcacctacagaggacaagatatt
gaatatatagaaattcgttctgatgcagatgagaatgtctcagcctctgataaaagaaga
agttacaattacagagtagtaatgataaagggagatacagcattggatatgcgaggaaga
tgtagtgctgggcaaaaggtgcttgcttctcttattattcgtcttgctctagcagaaaca
ttctgtctcaactgtggcatattggcactagatgagcctactaccaatcttgatcgagaa
aacatagagtctcttgcacatgccctggtggagataataaaaagccgctcacaacagcgt
aactttcagcttctggtgataactcacgatgaagattttgttgaacttctgggtcgttct
gaatacgtggaaacattctacaggataaagaagaacattgaccagtgctctgagatcatg
aaatgcagtgtcagctccctaggctcatacgttcattag

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