Fulmarus glacialis (Northern fulmar): 104069493
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Entry
104069493 CDS
T08370
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03440
Homologous recombination
fga03450
Non-homologous end-joining
fga04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104069493 (RAD50)
03450 Non-homologous end-joining
104069493 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
104069493 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fga03032
]
104069493 (RAD50)
03400 DNA repair and recombination proteins [BR:
fga03400
]
104069493 (RAD50)
DNA replication proteins [BR:
fga03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
104069493 (RAD50)
DNA repair and recombination proteins [BR:
fga03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
104069493 (RAD50)
BRCA1-C complex
104069493 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
104069493 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
AAA_21
AAA_15
SbcC_Walker_B
DUF2703
NPV_P10
AAA_29
AAA_13
Motif
Other DBs
NCBI-GeneID:
104069493
NCBI-ProteinID:
XP_009578889
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKTEFKTLEGVITR
TRHGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQSLKVRECQTELKYLKQNKEKAQEIQDHLSNREAQLAASKEN
VKSIESQLDPLKSSLAVVEQNLIKVMRLDNDIKALESRRRQMEKDNQDLQQKMEKVFQGT
DEQLRDRYQNHQRTVKEKEKRLSDCKRELDRATKECQRFNSEKSELLIERGRLQLQADRH
QEHITTRDSLIQSLAAQLELDGFERAPFNERHITSFHRLLKERQERDTEAANHLMREFAR
KEAMKQKQIDEIRDKKTGLERTIDLKSDIQNKKQVELKNVKYELQQLEGFSDRILELDQE
IVKTEHELEKAERNSNVETLELEVQTLQNEKINLDKALRKLDQEMEQLNLHTTTITQMDM
LKKDKADKEEQIRKVKSRHSDELTSLLGYFPNKNQLEDWLHDKNKKINQTRDNLAGLNKR
LASVEYHKTYVSNELRKKEAQLSLHEAKLFDVCGSQDFDSDLNKLQDEIEKSSKQRAVLA
GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RKEKKRDEMMSLKPLRRTVVELQDRDIPDLRNKIQNANRDLTGLKGEIEEQESALQTALS
KEESAKARLQDITLMERYQTDIRDVERKIAQQEAKLLGVDLSRTVLQVSQEKQEKKHLWD
TVTGKIELNQKLKQDQQNQIQQLKSTVNELKAEKLQISSSMQRRRQLEEQTVELTTEFQS
LCREIKEAKEQAFPLDATLEKLQQEKEDLMNKRTASNKETQEKINGIKEKVKDINKYVKE
IENYIQQGKEDYKKQKESELEEVNSQLAACEKRKEMISKEMEMIRQDIDTQKIQERWLED
NLTLRKRNEELKEVEDNVKHLVKEMGEMKVPQMKNEQKHLEEKIESLKRNHHVALGRQRG
FEEEIVRFKKELRESQFRDAEEKYRDMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQCSEIMKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagattgagaaaatgagtattcttggagtgaggagttttggggtagaggataaa
gacaaacaaattatcactttctttaatccgttaactattttagtgggaccaaatggtgca
ggaaaaacgactatcattgaatgtcttaaatatatatccactggagattttcctcctggc
accaaaggaaactcatttgttcacgatccaaaggttgccaatgaaacagatgttagagct
cagattcgattgcagtttcgagatgtaaacggagagctcgtagctgtccagcgatccatg
gtctgtacccagaaaggcaagaaaacagaatttaaaacacttgaaggtgtcattactaga
acaaggcatggcgagaaggtcagtctgagttccaagtgtgcagaaattgatcgagagatg
atcagcgcccttggtgtttccaaatcggtgattaacaatgtcattttctgccaccaagaa
gaatccaactggccattaagtgaagggaaggccctgaaacaaaaatttgatgagatcttt
tcagcaacaaggtatattaaagcactggaaactctccgtcaggtacgactgaaacaaagc
ttgaaagtaagagagtgtcagacagaactgaaatacctaaaacagaataaagaaaaagca
caggaaatccaggatcatcttagcaatagagaggctcaactggctgcttctaaggagaat
gtaaaatctattgagagtcaacttgatcctctaaagagttctctggcagtagttgaacag
aatctcataaaagtaatgaggctagacaacgacataaaagccctggagagcaggaggaga
cagatggagaaagataatcaagatctgcaacagaagatggaaaaggtttttcaaggaaca
gatgaacaactaagagatagataccagaaccaccagaggacagtgaaggagaaagagaag
agattatcagactgtaagcgtgaattagatagagccactaaagaatgccagagatttaac
agtgagaaatcagaactacttattgaacgaggtcgtcttcaactacaagcagatcgtcac
caagaacacatcacaacgagggattcattaattcagtctttggcagcacagctggaatta
gatggttttgagcgagcaccttttaatgaaaggcacattactagtttccacaggttgttg
aaggagagacaggaaagagatacagaagctgcaaatcatttgatgagagaatttgcacga
aaagaagcaatgaaacaaaaacagatagatgaaataagagacaagaaaactggattagaa
agaaccattgacctgaaatcagacattcaaaataagaaacaagttgaactgaagaatgta
aaatatgaattgcagcagttggaggggttttcagacagaattctggagttggatcaggag
attgtcaagacagaacatgagcttgagaaggctgagaggaacagcaatgtagaaacactc
gaactggaagttcaaactctgcaaaatgagaaaataaacctggacaaagctcttaggaag
ttagatcaagagatggaacagttgaatctacataccacgacaattacccaaatggacatg
ctaaagaaagacaaagcagacaaagaggagcagattagaaaagtaaaatcaagacattct
gatgaactgacatcactgttgggatactttccgaataaaaaccaacttgaagactggctt
catgataaaaataaaaagattaatcagacaagggataatcttgctggccttaacaaacga
ctggcatctgtagaatatcataaaacttatgtcagtaatgagctaagaaaaaaagaagca
cagttgtcccttcatgaagcaaaactttttgatgtttgtggaagccaagattttgacagt
gatctgaacaaacttcaagatgaaattgaaaaaagttcaaaacagcgagctgtgcttgct
ggagccactgcagtttattcacagttcattacacaattgacagaggagaaccagtcatgt
tgtccagtttgtcaaagagtttttcaaacagaggccgaactgcaagatgtaattagtgat
ctgcagtctaagctgcgtcttgctccagacaaactgaagtcaacagagtctgagcttaaa
agaaaagagaagaaacgtgatgaaatgatgagtcttaaaccacttcggcgaactgtagtt
gaactccaagatagggacataccagacttgaggaacaagatacagaatgcaaacagggat
ttaacaggcctgaagggtgagatagaagaacaggaatcagccttgcagacagctttgtct
aaggaggaaagtgccaaggcgcgtttacaggatataacactaatggaaaggtaccagact
gatattagggatgttgaacgaaaaattgctcagcaggaggctaagctgctaggggtcgat
ttaagtagaactgttctacaagtaagccaagaaaaacaagagaaaaaacacttgtgggat
acagttactggtaaaattgagttaaatcaaaaactcaagcaagaccagcaaaatcagatt
cagcagctaaagagtacagttaatgagcttaaagcagagaaacttcagatttccagcagc
atgcagcgtcgtcgacaactggaggagcaaacagtggaattaactactgagtttcagtcc
ttatgcagagagatcaaggaagcaaaagaacaggcatttcctttggatgccactttagaa
aaactgcagcaggagaaggaggatctaatgaataaaaggactgcaagtaataaagaaaca
caagagaagataaatggcataaaagagaaagttaaagatataaacaagtatgtgaaagaa
attgaaaactatattcaacaaggaaaagaagactataaaaagcaaaaagagtctgaactt
gaagaagtaaattctcagttagctgcctgtgagaaacggaaggaaatgataagtaaagag
atggaaatgattcgacaagatattgacactcaaaagatacaggaaaggtggctagaggat
aatcttactttgaggaaacggaatgaagagctaaaagaagttgaagacaatgtaaaacac
cttgtgaaggagatgggagaaatgaaagtcccgcaaatgaaaaatgaacaaaaacattta
gaggagaaaatagaatctctgaaaagaaaccatcatgttgcacttggccgacaacgtgga
tttgaggaagagattgttcggtttaaaaaggaacttcgagagtcacaattcagagatgca
gaggagaaatacagggatatgatgattgttatgagaacaacagagctggtgaacaaagat
ctggacctttattacaaggctcttgataaagcaataatgacatttcatagcatgaagatg
gaagaaattaacaaaataatacgtgacctttggcgaagcacctacagaggacaagatatt
gaatatatagaaattcgttctgatgcagatgagaatgtctcagcctctgataaaagaaga
agttacaattacagagtagtaatgataaagggagatacagcattggatatgcgaggaaga
tgtagtgctgggcaaaaggtgcttgcttctcttattattcgtcttgctctagcagaaaca
ttctgtctcaactgtggcatattggcactagatgagcctactaccaatcttgatcgagaa
aacatagagtctcttgcacatgccctggtggagataataaaaagccgctcacaacagcgt
aactttcagcttctggtgataactcacgatgaagattttgttgaacttctgggtcgttct
gaatacgtggaaacattctacaggataaagaagaacattgaccagtgctctgagatcatg
aaatgcagtgtcagctccctaggctcatacgttcattag
DBGET
integrated database retrieval system