Fulmarus glacialis (Northern fulmar): 104069835
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Entry
104069835 CDS
T08370
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104069835 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fga03041
]
104069835 (DDX5)
03009 Ribosome biogenesis [BR:
fga03009
]
104069835 (DDX5)
Enzymes [BR:
fga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104069835 (DDX5)
Spliceosome [BR:
fga03041
]
Complex A
U1 snRNP components
U1 related factors
104069835 (DDX5)
Complex B
104069835 (DDX5)
Ribosome biogenesis [BR:
fga03009
]
Eukaryotic type
Pre-60S particles
Helicases
104069835 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
104069835
NCBI-ProteinID:
XP_009574646
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
FGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVVRRTVQEVEQ
YRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMV
GVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYSRACR
LKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLD
MGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQ
IVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDK
SQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARS
TKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSRGDRRDRYSAGK
RGGFSSFRERENFERNYGALGKRDFGAKTQNGAYSAQSFSNGTPFGNGFAAAGMQAGFRA
GNPAGAYQNGYDQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPTSYSQ
NT seq
1780 nt
NT seq
+upstream
nt +downstream
nt
gtttggagctccccgttttggaggaagtagaggtggacctctctctgggaagaaatttgg
aaaccctggggaaaaacttacaaaaaagaaatggaatttagatgagctgcccaaatttga
gaagaacttctatcaagaacatcctgatgtagttagacgtactgtgcaagaagttgaaca
gtacagatcaagcaaagaagtcacagttaggggccataactgtccaaaaccgattataaa
cttctatgaagctaactttcctgcaaatgttatggaagtaattcagaggcagaacttcac
tgaaccaactgctattcaagcacaaggttggcctgttgcattgagtggattggatatggt
tggagtggcacaaactggatcagggaaaacactgtcttacttgttgcctgctattgtgca
tataaatcatcagccattcctggagcgaggagatggacctatttgtcttgtgctggcacc
aactcgtgaactggctcaacaagtgcagcaggtagctgctgaatatagcagagcatgccg
tttgaagtctacatgtatttatggaggtgctccaaagggaccacaaattcgtgacttgga
aagaggtgtggaaatctgcattgcaacacctggaagacttatagacttcttagaagctgg
aaagaccaatctcaggaggtgtacttaccttgtccttgatgaagctgacaggatgcttga
catggggtttgaacctcagatcagaaaaattgtggatcagataagacctgacaggcaaac
tctgatgtggagtgccacatggccaaaggaagtaaggcagctggctgaagactttttgaa
agaatatgtacacatcaacattggtgcattagaactaagtgcaaaccacaacattcttca
gattgtggatgtgtgccatgatgtagagaaagatgacaagcttattcgtttgatggaaga
aataatgagtgagaaggaaaataaaacaattgtttttgtggaaaccaaaagacggtgtga
tgatcttaccagaaaaatgaggagagatgggtggccagcaatgggtattcatggtgataa
aagtcagcaggagcgggactgggttctaaatgaattcaaacatggaaaagcaccaatcct
gattgctacagatgttgcatccagaggtctagatgtggaagatgtgaaatttgtcatcaa
ttatgactaccctaactcctcagaggactatatccaccgaattggacgaactgcccgcag
taccaaaacaggcacagcatacacattctttactcctaacaatattaagcaagtaaatga
cctcatctctgtgcttcgggaggctaatcaagccatcaaccccaaattgcttcagttgat
tgaagacagaggttcaggtcgttcccgaggtgatcgacgtgacagatattctgcgggcaa
aaggggtggatttagtagttttagagagagggagaactttgagagaaactatggtgcact
aggaaagagagacttcggagcaaaaactcaaaatggggcctacagtgcccaaagtttcag
taatggaactccttttggaaacggctttgcagccgcaggcatgcaagctggcttcagggc
tggtaaccctgcaggagcttaccagaatggctatgatcagcagtatggaagtaatattgc
aaatatgcacaatggcatgaatcaacagcagtatgcatatcctgccactggtgctgctcc
tatgataggttacccaatgccgacaagttattctcaataa
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