Fulmarus glacialis (Northern fulmar): 104070030
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Entry
104070030 CDS
T08370
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104070030 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fga03041
]
104070030 (SF3B1)
03036 Chromosome and associated proteins [BR:
fga03036
]
104070030 (SF3B1)
Spliceosome [BR:
fga03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
104070030 (SF3B1)
Complex B
104070030 (SF3B1)
Complex C
U2 SnRNP specific factors
104070030 (SF3B1)
Chromosome and associated proteins [BR:
fga03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104070030 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
Motif
Other DBs
NCBI-GeneID:
104070030
NCBI-ProteinID:
XP_009583952
LinkDB
All DBs
Position
Unknown
AA seq
1327 aa
AA seq
DB search
MSQVLDSLDSPMVCRILGGAGCTWGQDSAGDHGQQYIEAQIREIQGKKPALDEAQGVGLD
STGYYDQEIYGGSDSRFAGYVTSIAATELEDDDDDYPSTSLLGQKKPGYHAPVALLNDIP
QSTEQYDPFAEHRPQKIADREDEYKKHRRMMIISPERLDPFADGGKTPDPKMNARTYMDV
MREQHLTKEEREIRQQLAEKAKAGELKVVNGAASQPPSKRKRRWDQTADQTPGATPKKLS
SWDQAETPGHTPSLRWDETPGRAKGSETPGATPGSKIWDPTPSHTPAGAATPGRDTPGHA
TPGHGGATSSARKNRWDETPKTERDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSR
WDETPASQMGGSTPVLTPGKTPIGTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNR
PLSDEELDAMFPEGYKVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVN
DQPSGNLPFLKPDDIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALR
QITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVV
IEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVAS
ALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDE
QQKVRTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLM
DAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKH
FWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMG
NLGAADIDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVL
WRLNNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGAL
KAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMR
ICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIA
IVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDAL
MDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGL
RVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIR
YELDYIL
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagttctggactcgctggattcccctatggtgtgcaggattttagggggagct
ggatgtacctgggggcaagattcagcaggtgatcatggccagcagtatattgaagcacaa
attcgagaaattcaaggaaaaaagcctgctcttgatgaagcacaaggagtaggccttgat
tccacaggatattatgatcaagaaatttatggtggcagtgacagcaggtttgctggatat
gtcacttctattgcagcaactgaattggaagatgatgatgatgactacccttctacaagt
ttgcttggccagaagaagccagggtaccatgctccagtggcattgcttaatgacatacca
cagtctactgaacagtatgatccttttgcagaacaccgtcctcaaaagattgcagatcgg
gaagatgagtacaaaaagcacaggcggatgatgataatttcccctgagcgtcttgatcct
tttgcagatggagggaagacaccagatcctaaaatgaatgccagaacgtacatggatgtt
atgcgtgaacagcatttaacaaaagaagagagggaaattaggcagcaactagctgaaaaa
gctaaagctggagagcttaaagtcgtcaacggagccgcatctcagccaccttcaaaacgc
aaacggcgttgggatcagacagctgatcagactcccggtgctacacctaaaaaattatcc
agctgggatcaagcagagactcctggacatacaccatctctgcgatgggatgaaactcca
ggccgtgcaaagggtagtgaaactcctggtgccaccccaggctcaaaaatatgggatccg
actcccagtcatacaccagcaggagctgcaacacctggacgggacacgccgggtcatgca
acaccaggccatggaggtgccacttccagtgcacgtaaaaatcgatgggatgaaacacct
aaaacagaaagagatactccgggacatggcagtggatgggctgagacgcctcgtacagat
agaggtggtgactccattggtgagacaccaaccccaggagcaagtaaaagaaagtcacga
tgggatgaaacacctgctagccagatgggtggcagcactcctgttctgacacctggcaaa
acacccattggtacaccagctatgaacatggcaactcctacaccaggtcatatcatgagc
atgactcctgagcagctgcaggcttggcgttgggaaagggaaattgatgagagaaacaga
ccactttctgatgaagaattggatgctatgtttccagaaggatataaggttcttccccca
ccagctggttatgtacctattcgcactccagctcgtaagcttacagcaactccaacacct
ttgggtggtatgactggattccacatgcagacagaagaccgaactatgaagagtgttaat
gaccaaccatctggcaatcttccattcctaaaaccagatgatatccaatactttgataaa
ctgctggttgacgttgatgaatcaactctaagtcctgaagaacagaaggagagaaaaata
atgaaattacttctgaaaataaagaatggcacacctcccatgagaaaggctgcgttgcga
caaattactgataaagctcgggaattcggagcagggccgttgtttaatcagattctgcct
ctgctgatgtcaccaacacttgaagatcaggagcgtcacttgcttgtcaaagtcattgac
agaattctttacaaactggatgacttggtccgaccatacgtacacaagatccttgttgtc
attgaaccactgctcattgatgaagactattatgctagagtggaaggcagagaaattatt
tcaaacttggctaaggctgctggtttggcaacaatgatctccacaatgcgacctgatatt
gataatatggatgagtatgtccgaaatacaacagctcgagcctttgctgttgttgcctct
gctttgggcattccttctctgctacccttcttgaaagctgtctgtaaaagcaaaaaatcc
tggcaggctaggcatactggcatcaagattgtacagcagattgctattcttatgggatgt
gctatcttgcctcatctcaggagcttggttgaaattattgaacacggtctggtggatgag
cagcagaaagttcgcaccatcagtgctttggctattgctgctttggctgaggcagctact
ccctatggtattgagtcatttgattctgttctgaagcctttatggaagggtatacgtcaa
cacagaggaaagggtttggctgcctttttgaaggctattggttacctgattccactcatg
gatgctgagtatgcaaactattataccagagaagtcatgctaatccttatcagagagttc
cagtctcctgatgaagagatgaaaaaaattgtgttgaaggtggtaaagcagtgttgtggt
acggatggtgttgaagcaaactacattaaaacagaaatcttgccaccttttttcaaacac
ttctggcagcacagaatggcattggacagaagaaattacagacagttggttgatacaact
gtggagctggcaaataaagttggagcagcagaaattatttctagaattgtggatgatctg
aaagatgaggctgagcagtacagaaaaatggtcatggaaacaattgagaagataatggga
aatctgggggcagcagacattgatcataaactggaagaacaacttattgatggtattttg
tacgcctttcaggaacagaccacagaggattctgtgatgctgaatggttttggcacagtc
gttaatgctctaggcaaaagagttaaaccctacttgccacaaatctgtggtacggttttg
tggcgtttgaacaacaaatcagctaaagttaggcagcaggctgctgacctgatctctcgt
actgcagttgtcatgaagacttgtcaagaggaaaaactgatgggacacttgggtgttgtg
ttatatgagtacctgggtgaagaatatcctgaagtactcggcagcatactcggcgcactt
aaggctattgtgaatgttataggtatgcacaagatgacgccaccaatcaaagatctgctg
ccacggcttacacctattttgaagaacagacatgagaaagtacaggaaaattgtattgat
cttgttgggcgcattgcagaccgaggtgcagaatatgtttctgcaagagaatggatgagg
atctgctttgaactgcttgaattattaaaagctcacaagaaagcaatccgaagagccaca
gtgaacacttttggttatattgcgaaagctatcggacctcacgatgtattggctacactg
ctaaataacttgaaagtacaggaaaggcagaacagagtgtgtactacagtagcaattgct
attgtagctgaaacatgctcacctttcacagtgctgcctgcactcatgaatgaatacaga
gttccagagttgaatgtccagaatggtgtgttaaaatctctttctttcctctttgaatac
attggagagatgggaaaagattacatttatgctgttacaccattgcttgaagatgcttta
atggacagggatcttgtacacagacaaacagccagtgctgtggtgcaacatatgtctctt
ggtgtttatgggtttggctgtgaagattctcttaatcatttgttaaattacgtatggcct
aatgtgtttgaaacctctcctcacgtcattcaggcagttatgggggctctggagggcctc
agagttgctattggtccctgcagaatgttgcagtattgtttacagggtttgtttcaccct
gccaggaaagtcagagatgtttattggaagatttataattcgatctacatcggatcacag
gatgctctgatagcacattatccaagaatctataacgatgaaaagaacacctatattcgt
tatgaacttgattacatcttataa
DBGET
integrated database retrieval system
