Fulmarus glacialis (Northern fulmar): 104070399
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Entry
104070399 CDS
T08370
Symbol
ERCC3
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPB subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03022
Basal transcription factors
fga03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104070399 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
104070399 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fga03021
]
104070399 (ERCC3)
03400 DNA repair and recombination proteins [BR:
fga03400
]
104070399 (ERCC3)
Enzymes [BR:
fga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104070399 (ERCC3)
Transcription machinery [BR:
fga03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104070399 (ERCC3)
DNA repair and recombination proteins [BR:
fga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104070399 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
DUF2605
Motif
Other DBs
NCBI-GeneID:
104070399
NCBI-ProteinID:
XP_009574721
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MENLPSEALFPLQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQE
KSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMW
STIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRSWEAERVMEWLKSQEWGLMILD
EVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNSGY
IAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVF
ADNVFALKEYAIRLGKPYIYGPTAQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEAN
VLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLV
DQGYSFKVITKLAGMEEEELSFSSKEEQQQLLQKVLQASDLDAEEEVVAGEYGSKSAQVS
RRTGTMSSMSGADDTVYMEYHSSRSKASSNKHIHPLFKRFRK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggagaatttaccatctgaagctttgttccctcttcaggagatgattgaagaacttcag
aagcgttgtatccatttagagtaccccttgctggcagaatatgatttcagaaatgattcc
gtgaatcccgatattaatatagatctgaaacctacagctgttctcaggccctatcaagag
aaaagcctacggaagatgtttggaaatgggcgagccaggtccggtgttattgtcttgccg
tgtggtgctggcaagtccctagttggagtgacagctgcgtgtactgtccgcaagcggtgt
ctggtccttggtaattctgcagtgtctgtagagcagtggaaagcccaattcaagatgtgg
tccaccatcgatgacagtcagatatgtcggttcacttctgatgccaaagacaagcccatt
ggctgttctattgctatcagcacatattccatgttgggacacacgacgaaaagatcctgg
gaagcagaaagagtaatggagtggcttaaaagtcaagagtggggccttatgatacttgat
gaagtacatactattcctgcaaaaatgttcagacgtgtgctcactattgtacaagctcat
tgtaaactggggctgactgctaccctggtcagagaagatgataaaattgttgacctgaac
ttcctgattggaccaaagctctatgaagccaactggatggagctgcagaacagtggctac
attgctaaagtccagtgtgctgaggtttggtgcccaatgtcacctgaattttatagagaa
tacgtagctatcaaaacaaagaaacggatactgctgtacaccatgaacccaaataaattc
agagcctgccagttcctgattaagtttcacgagcgacgaaatgacaaaatcattgtattt
gctgacaatgtgtttgcactgaaggagtatgcaatcagacttgggaaaccctatatatat
ggtcctactgcacaaggagaaagaatgcaaattctacaaaacttcaagcacaatccaaaa
atcaacactattttcatttccaaggtaggtgacacatccttcgatctgccagaagccaat
gttctgattcagatttcgtcccatggtgggtctcgaagacaggaggctcaaagactggga
cgagtgctgagagccaaaaaaggcatggttgcagaggaatacaatgcctttttttattct
cttgtatcccaggacactcaggaaatggcatattcaacaaagcgacaacgttttcttgta
gatcaaggttatagcttcaaggtaataacaaagcttgcaggcatggaagaagaagaactt
tcattttcatccaaagaagaacagcagcagcttctgcagaaagttctgcaagcatctgac
ctggatgctgaggaggaagtagttgctggagaatatggttcaaagtcagctcaggtgtca
cgtcgtacgggcacaatgagctctatgtcaggagcagatgatacagtttacatggaatac
cactcttcacggagtaaggcatcttcaaataaacacatccatccactatttaaacgcttc
cggaagtga
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