Fulmarus glacialis (Northern fulmar): 104070508
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Entry
104070508 CDS
T08370
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
fga
Fulmarus glacialis (Northern fulmar)
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fga03041
]
104070508 (PRPF39)
Spliceosome [BR:
fga03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104070508 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_12
Mad3_BUB1_I
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
104070508
NCBI-ProteinID:
XP_009579409
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MENADNAEEEKPTVSNDSTDNGAETATEEQHMDFSTEIMSVTEMEQSPDSSPDLNEENTQ
ESEIPNIESLQTTDIEACFPPDFDKFWKVVEDNPQDFTGWVYLLQYVEQENHLPAARKAF
DRFFTHYPYCYGYWKKYADLEKRHDNVKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLD
PADPETNSTIRGAYEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTSIYDRILGIPTQ
LYSHHFQRFKEHIQNNLPRDLLTTEQFVQLRRELASVNGHSGEDAQPGDDLPSGTEDITD
PAKLITEIENMRHRIIEIHQEMFNHNEHEVSKRWTFEEAIKRPYFHVKPLEKIQLKNWKE
YLEFEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACTIHLP
KKPMVHMLWAAFEEQQGNIDEARRILKTFEECILGLAMIRLRRVSLERRHGNMEEAEHLL
EDAVRNAKSISESSFYAIKLARHLFKVQKNLPKARKVLSEAIEIDKENTKLYLNLLEMEY
SGDLKQNEENILSCFDKAVNGALSIKMRITFSQRKVEFLEDFGSDVNKLLDAYDEHQALL
KEQDSLKRRAENGSEEPDEKKMLTDDPTLASAQMMDGDMQVNQAAYNYNAWYQYNYQNAW
NYGQYYHPT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgcagataatgcagaggaggagaagccgactgtaagcaatgacagcacagac
aatggcgctgaaacagcaacagaagaacagcatatggacttcagtacagaaattatgagt
gtaactgagatggaacaatcacctgacagttcccctgacttgaatgaagagaacacacag
gagagtgaaattccaaatattgaaagtttacagacaacagatattgaggcttgcttccct
ccagattttgacaagttctggaaagtagtagaggacaatccccaggatttcacaggatgg
gtatatctactacagtatgtagagcaggagaaccacttaccagctgccaggaaagcattt
gacaggtttttcacgcattatccatattgctatggatattggaaaaagtatgcagatctt
gaaaagcgacatgacaacgttaaacagtctgatgaggtttatcgcagagggcttcaggca
attcctcttagtgttgatctttggatacattatataaacttcttaaaggagaccttggac
cctgccgatcctgaaactaacagtactattcgaggagcctatgaacatgcagtcttagct
gctggcacagatttccgttctgacagactatgggaaatgtatataaactgggaaaacgaa
cagggaaacctaagggaagttacgtccatatatgaccgcatccttggaattccaacacaa
ctctacagtcatcatttccagaggtttaaagaacatatacagaacaacttgcctcgagac
cttctgactactgagcagtttgttcagctgcgcagggaactagcatctgtgaacggccac
agtggggaggatgcgcaacccggagacgacctgccctctggtactgaagatataactgac
cctgccaagctaatcactgagatagaaaacatgaggcacagaatcattgagattcatcag
gaaatgtttaaccacaatgaacatgaagtcagtaagaggtggacgtttgaagaagcgata
aagaggccttactttcatgtcaaacctctggagaaaattcagctgaaaaactggaaagag
tacttagaatttgagatagaaaatggcactcatgaacgagttgtggtcctctttgaaaga
tgtgttatttcatgtgccctctatgaggacttctggattaagtatgccaaatacatggag
aatcatagtattgaaggagtgaggcatgtctacagcagggcttgcacaatacatcttcct
aagaaaccaatggttcacatgctgtgggctgcctttgaggagcagcagggcaacatcgat
gaagcaagaagaatcttgaaaacatttgaagagtgtattctagggctagcaatgattcgc
ttacgaagagtaagcttagaacgcagacatggaaacatggaagaagctgaacatctgctt
gaagatgctgttaggaatgccaaatcaattagcgaatcgtcgttttatgccatcaaatta
gctcggcacctcttcaaagtacagaaaaatcttccaaaggcaagaaaagtgctgtcagaa
gccatagaaattgacaaagaaaatacgaaactgtatctcaacttacttgaaatggagtac
agtggtgatctcaagcaaaatgaagaaaacatcttgagctgttttgataaagctgtcaat
ggcgcattgtctataaaaatgaggattacgttttctcagcgaaaagtggagtttcttgaa
gattttggttctgatgtaaacaagcttttggatgcctatgatgaacaccaagcacttctg
aaggagcaggattctttaaaaaggagagcagagaatggatcagaagagccggatgagaag
aaaatgctcacagatgacccaactttggcatcagcacagatgatggatggagacatgcaa
gtcaatcaggcagcgtataactacaatgcctggtatcagtacaattaccagaacgcatgg
aactatggacagtattatcatccaacttga
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