Fulmarus glacialis (Northern fulmar): 104070595
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Entry
104070595 CDS
T08370
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03008
Ribosome biogenesis in eukaryotes
fga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104070595 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
104070595 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fga03021
]
104070595 (XRN2)
03019 Messenger RNA biogenesis [BR:
fga03019
]
104070595 (XRN2)
03009 Ribosome biogenesis [BR:
fga03009
]
104070595 (XRN2)
03016 Transfer RNA biogenesis [BR:
fga03016
]
104070595 (XRN2)
Transcription machinery [BR:
fga03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104070595 (XRN2)
Messenger RNA biogenesis [BR:
fga03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
104070595 (XRN2)
Ribosome biogenesis [BR:
fga03009
]
Eukaryotic type
Pre-60S particles
RNases
104070595 (XRN2)
Transfer RNA biogenesis [BR:
fga03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
104070595 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
104070595
NCBI-ProteinID:
XP_009574112
LinkDB
All DBs
Position
Unknown
AA seq
952 aa
AA seq
DB search
MRALPGVVGSAVVSLRAKRSLLFNSSFVNYKLQQALGLVENKSEAACLEKSKEMQVQMVK
NNLGVWKLICLRETALFASGSVPWSCSGCGLRKAAASARAGSRCTSLQPRERLCHPKGHV
LKYLFRLRSQAKECNGVKAPIDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNED
EMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAEEKQKI
RQEILAKGGILPPEEVKERFDSNCITPGTEFMDNLAKCLRYYVADRLNSDPGWKNLTVIL
SDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEF
KPNKPKPCGLCNQMGHEVKDCQGLPREKQGKHDQFADSLPIAEQEFIFIRLCVLREYLER
ELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTG
GYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKEKRKRMKRDQPSFIPG
GQFSPQALGNRSSPQAISNPRQAAFEMRMHDRQNSTTSSSPNTSLTSDGSPSLAGGIKRK
AEDSDSEPEPEDNIRLWETGWKQRYYKNKFDVDASDEKFRRKVVQSYVEGLCWVLRYYYQ
GCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPTWR
KLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEESR
RNSLGGDVLFVGKHHPLCDFIVEQYKTKNTESVDIPPELCHGIQGKLTLNENAVLPDQTV
ESPVPMLRDLAQNSAVSISFKDPQFDEDFVFKAIVLPGAKKPAPVLKPGDWEKTNNDGRP
WRPQLGFNRDRKPVHLDQSAFRTLGHIKEGCQECMPMQYLLELTGAHTPGRF
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccttcccggggtggtgggctctgccgttgtgtcgcttcgggcaaagagatcc
ctgctgttcaacagctcttttgtaaactacaagctgcagcaagctttaggacttgttgaa
aataaaagtgaagctgcctgtcttgaaaagagtaaggaaatgcaagtgcaaatggtgaaa
aataacttgggggtctggaaactcatctgtctccgtgagaccgccctgtttgcaagtgga
tcggttccatggtcctgctcgggatgtgggctcaggaaagccgctgccagtgcaagagca
ggttctcggtgcacgtcactgcagccacgtgaacgcttgtgccatcctaagggacacgta
ctgaaatacttgtttcgactgcgttcacaggctaaagagtgcaatggcgtcaaggctcca
attgatacaagcaaacctaaccctaatgaggtggaatttgataacctatatttggatatg
aatggtataattcacccttgtacacatccagaagacaagccagcacccaaaaatgaagat
gaaatgatggttgcgatttttgagtatattgacaggatcttcaacattgtaagaccaagg
cgacttctttacatggctatagacggagtagctccacgtgcgaaaatgaatcaacagcgg
tcaagaagattcagagcatcaaaggagggcatggaagctgctgaagagaagcaaaaaata
agacaagaaattctggcaaaaggtggcattcttcctccagaagaagtgaaagagagattt
gacagcaactgtattaccccgggaactgagtttatggacaatcttgctaaatgtctccgc
tattatgttgctgaccgtttgaacagtgacccagggtggaaaaatttgacagttattttg
tctgatgctagtgctcctggtgaaggtgaacataaaatcatggattacattagaagacaa
agagctcaaccaaaccatgacccaaacactcatcattgtctgtgtggggctgatgctgat
ctgattatgcttgggttagctacacatgaaccaaacttcactataattagggaagagttt
aaaccaaataaacccaagccatgtggtctttgtaaccagatgggtcatgaggttaaggat
tgccaaggtttgcccagagaaaaacaaggcaagcacgatcagtttgcagacagtcttcct
atcgctgagcaagaatttatctttatccggttatgtgttttgcgagagtatttggaaaga
gaactcactatggccagtttgcctttcacttttgattttgaaagaagtgttgatgactgg
gtctttatgtgcttctttgtgggaaatgactttcttcctcatctgccatctttggagatc
agggagggagcaattgatcgcttggttaacatatataaaaatgtggtgcacaaaactggg
gggtacctcacagaaagtggttttgtcaacctacagcgagtccagatgatcatgttagct
gttggagaagttgaagatagtattttcaaaaagagaaaagatgacgatgataactttaaa
agacggcaaaaagaaaaaagaaaaagaatgaagagggatcagccttcttttattcctggt
ggacagttttcccctcaagctctgggaaatcgatctagtcctcaggcaatcagtaaccct
agacaagccgcctttgagatgagaatgcatgacagacagaattctacaacttcatcatct
ccaaataccagcctcacttctgatggcagcccatccctggcaggaggaattaagcgaaaa
gctgaagatagtgacagtgaacctgagccagaggataatatcaggttatgggaaactggt
tggaaacagcgctactataaaaacaaattcgatgttgatgcatctgatgagaaattccgt
cgtaaagttgtacagtcctatgtggaagggctttgctgggttctcagatattattaccag
ggctgtgcatcctggaactggtattacccttttcactatgctccattcgcttctgacttt
gagggtattgcagacatgccttcagattttgagaaaggctcaaaaccgtttaagcctctt
gaacaacttatgggagtatttccagctgcaagtggaaattttctgccaccaacgtggagg
aagctcatgacagatccggaatcaagcataattgacttctaccctgaagattttgctatt
gatttaaatgggaagaagtacgcttggcaaggtgttgcattattgccatttgttgatgag
cgacgccttagagctgccctggaagaagtctaccctgacctgactcctgaagaaagcaga
aggaatagccttggtggcgatgttctctttgttggaaagcaccatccactttgtgacttt
attgtggaacagtacaagaccaaaaatacagagtcagtggatatacccccagagctgtgc
catggaatccagggaaagcttacgctgaatgaaaatgctgttcttccagatcagacagtg
gagtctcctgttccaatgctgcgtgatcttgcacaaaattctgcagtcagtatctctttc
aaagatccacaatttgatgaagactttgttttcaaggctatagtgttacctggtgcaaag
aaacctgctccagttctgaagccaggagactgggaaaaaaccaacaatgatggcaggcct
tggagaccgcagcttggttttaatcgagacagaaaaccagtccatttggaccagtcagcg
tttagaactttaggccatattaaagagggatgccaggaatgtatgccaatgcagtacctc
ttggaacttacgggagcccatacaccaggccgcttctga
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