KEGG   Fulmarus glacialis (Northern fulmar): 104070651
Entry
104070651         CDS       T08370                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
fga  Fulmarus glacialis (Northern fulmar)
Pathway
fga03082  ATP-dependent chromatin remodeling
fga03083  Polycomb repressive complex
fga04110  Cell cycle
fga04330  Notch signaling pathway
fga04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:fga00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104070651 (HDAC1)
   03083 Polycomb repressive complex
    104070651 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    104070651 (HDAC1)
   04350 TGF-beta signaling pathway
    104070651 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    104070651 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:fga03036]
    104070651 (HDAC1)
Enzymes [BR:fga01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104070651 (HDAC1)
Chromosome and associated proteins [BR:fga03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     104070651 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     104070651 (HDAC1)
    BRAF-HDAC complex
     104070651 (HDAC1)
    REST complex
     104070651 (HDAC1)
    SHIP complex
     104070651 (HDAC1)
    MiDAC complex
     104070651 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     104070651 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104070651 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    104070651 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 104070651
NCBI-ProteinID: XP_009572738
LinkDB
Position
Unknown
AA seq 451 aa
MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK
QMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGD
RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP
YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPEDAV
QEDSGDEEEEDPEKRISIRNSDKRISCDEEFSDSEDEGEGGRKNVANFKKAKRVKTEEEK
EEEEKKDEKEEEKAKEEKAEPKGVKEETKST
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgaaacctcacaggatccggatgacccacaacctactgctgaactatggcctctacagg
aagatggagatatatcgccctcacaaggcaaatgcagaagaaatgaccaagtaccacagc
gatgactacataaaatttctgagatctattcgcccagataacatgtctgagtacagcaag
cagatgcaaagatttaatgttggggaagactgccctgtgtttgatgggctgtttgagttt
tgtcagctctctgctggaggctcagttgccagtgctgtgaagctgaacaagcaacagaca
gatattgctgtgaattgggcgggaggccttcaccacgctaagaagtcagaggcttctggc
ttctgttatgtcaatgatatcgtcttggctatcttggagctcctaaagtatcaccagaga
gtgctgtatatcgacattgatattcaccatggagatggcgtggaggaagccttttatacc
acagaccgtgtcatgaccgtgtcctttcataagtacggagaatacttcccaggaacagga
gacctacgggacattggtgcaggcaaaggcaagtactacgctgtcaactatcccctccgg
gacggaattgatgatgagtcctatgaagcaatattcaagccagtgatatctaaagtgatg
gagacgttccagcctagcgcagttgtcttgcagtgtgggtcagattctctgtcaggggac
aggctgggttgttttaatctgaccatcaaaggtcatgccaagtgtgtggagtttgtaaaa
agttttaatttgcctatgctgatgctgggaggaggtggctatacgatccgcaacgtggct
agatgctggacctatgagactgctgtggctttggacactgaaattcccaatgaacttcca
tataatgactattttgagtattttggaccagactttaagctccacatcagtccctcgaac
atgactaaccagaataccaatgagtatctcgagaagatcaagcaacgtctctttgagaat
ctgcgcatgctgcctcatgcccctggcgtccagatgcagccaattcctgaggatgctgtt
caggaagacagtggagatgaagaggaggaagatcctgagaaacgcatttcgatccgcaac
tctgataagagaatatcctgtgatgaagaattctctgactctgaagatgaaggggaagga
gggcgcaaaaatgttgccaactttaagaaagctaagcgtgtgaaaacagaagaggaaaag
gaggaagaggagaagaaagatgagaaagaagaggaaaaagcaaaagaggagaaagcagaa
cccaaaggggtgaaggaagagacgaaatccacctaa

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