Fulmarus glacialis (Northern fulmar): 104072086
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Entry
104072086 CDS
T08370
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03013
Nucleocytoplasmic transport
fga03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104072086 (UPF2)
03015 mRNA surveillance pathway
104072086 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fga03019
]
104072086 (UPF2)
Messenger RNA biogenesis [BR:
fga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104072086 (UPF2)
mRNA cycle factors
P-body specific factors
104072086 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
104072086
NCBI-ProteinID:
XP_009585203
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MPAERKKPANMEEKESPLNNKEKEFSERRPVSTREKPKEDVKVGMKKETLKVPEDKKKKL
EEDKRKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKLEEEEKKKQEEEEKKKQEEAAAQL
KEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKTVAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQEKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKCSQNKDSSKDESRDSKDAKDNKEAPGSEDLELELENLDINDDPLELDCGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
RKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYK
DLSKVTTEKVLRQMRKLPWQDAEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLDV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEEAIRQVQDLEREFLIKLGIVNDKDSKD
SITEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNEEEEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLKKGPPLGGGEGESESGDTMPFVMLTRKGNKQQVRFIGAAETRNLHCKEVLT
DENGTCCASFR
NT seq
3635 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgcaaaaagccagcaaatatggaagaaaaagaatctccgttaaataat
aaagaaaaagaatttagtgaaaggcgaccagtgagcaccagggagaagccaaaagaagat
gtcaaggttggcatgaagaaagagactttaaaggttcctgaagataaaaagaaaaaactg
gaagaggataaaagaaaaaaagaagacaaggagcggaagaaaaaagaagaggataaagta
aaggcagaagaagagcaaaagaagaaagaagaggaagaaaaaaagaaacttgaagaagag
gagaaaaagaaacaagaggaggaagagaaaaagaaacaagaagaagcagctgctcagctg
aaagaaaaagaggaagcacatcagctccatcaggaggcttgggagcgccatcaggcaaga
aaagagcttcgcagcaaaaaccagaatgcaccagacaatcgccccgaggaaaacttcttc
agcagactagattccagtttgaagaagaacacagcttttgttaagaagctaaaaaccatt
acagagcaacaaagggactccttgtcccatgactttaatagcctgaatttaagcaaatac
attgcagaagcagtagcttctattgtggaagccaaactgaaaatatcagatgtgaactgc
gctgtgcacttgtgttccctctttcaccagcgctatgctgattttgctccttcactactt
caggcttggaaaaaacattttgaagcaaggaaggaagagaagactcccaacattaccaag
ttaagaactgatttgcgtttcattgcagaattgacaatagtcgggattttcactgacaaa
gaaggtctgtctttaatctatgagcagcttaaaaatattattaacgctgatcgagaatcc
cacactcatgtttctgtggttatcagcttttgtcggcattgtggagatgacattgctggt
ttggtaccaaggaaagtaaaaactgttgcagagaagtttaacttgagctttcctcctagt
gaaataattagcccagagaaacaacagcccttccagaatttgttgaaggaatactttacg
tctttgaccaaacacctgaaaagggaccacagggagctacaaaatattgaaagacaaaac
aggcgcattcttcactccaaaggagagctgagtgaagatcgacacaagcaatatgaggaa
tttgcaatgtcctatcagaagctgttggcaaattctcaatctctagctgatcttttggat
gaaaatatgcctgaccttccccaggagaaaccaacacctgaggaacatggacctggtatt
gatattttcacaccaggaaagcctggagagtatgacctggaggggggtatctgggaagac
gaagatgctagaaacttctatgagaatctcattgacttaaaggcttttgtgccagcaatt
ttgtttaaagataatgaaaaatgttcccagaacaaggattccagcaaagatgaatcaaga
gattcaaaagatgccaaagacaataaggaagcacctgggagtgaggatttggagttggag
ctggagaacctggatattaatgatgatcctctggagttagactgtggagatgaggcagaa
gatcttacaaaaaagcttcttgatgagcaagaacaagaggatgaagaagccagtactgga
tctcatttaaaacttatagtagatgcttttcttcagcagcttccaaattgtgtcaacaga
gacctcatagacaaggcagcaatggatttttgcatgaatatgaatacaaaagccaacaga
agaaaactagtacgagcacttttcatagttcctagacaaaggttggatttgctaccgttt
tatgcaaggctggttgccacattgcatccctgtatgtctgatgtagcagaggatctatgt
tccatgctgaaaggggatttcagatttcatgtaagaaaaaaggaccagatcaacattgaa
acaaagaataaaactgtgagatttattggtgagcttaccaagtttaagatgttctccaaa
aatgatactcttcactgtttaaagatgcttctgtcagacttttctcatcaccatattgaa
atggcatgtactctgctggaaacctgtggaagattcctctttagatcaccagaatctcac
ttaagaaccagtgttcttttggaacaaatgatgagaaaaaaacaagcaatgcatcttgat
gcacgctatgttacaatggtagaaaatgcctattactactgtaatccccctccagctgaa
aaaactgtgaagaaaaaacgtcctcctttgcaggaatatattcgtaagcttctttataag
gatctctccaaggtcaccacagagaaggtcctgagacagatgcgcaagctgccttggcag
gatgcagaagtaaaagactatgttatatgctgtatgatcaacatctggaatgtgaaatat
aatagcattcactgtgtagccaacctcttagcagggttggtcctttaccaggaagatgtc
ggaattcatgttgtggatggagtgctagaggatattcgactaggaatggaggttaaccag
ccaaagtttaaccaacggcggatcagcagcgccaagtttttgggggagctttacaattat
cgaatggtggaatcagctgtaatatttcgaactctttattctttcacatcatttggtgtg
aatcctgatggtagtcctagtccactggaccctccagagcatcttttcagaatcagacta
gtttgtactatcctcgatacctgtgggcagtattttgacagaggatccagcaaacgaaaa
cttgattgctttcttgtatattttcagcggtatgtttggtggaaaaaaagtctggatgtt
tggacaaaagaccacccatttcctatagacatagactatatgatcagtgatacactggaa
ctgctgagaccaaagataaagctctgcaattctttggaagaagctatcagacaggtgcaa
gacttggaacgcgaattcttaataaaattaggaattgtgaatgacaaagattccaaagat
tccataacagaaggagagaatctggaagaggatgaagaggaggaggaaggtggagcagag
acagaggaacaatctggaaatgaaagtgaagtaaatgagccagaagaagaggagggctct
gacaatgaggaagaagaaggtgaagaagaggaggaagaaaacacggattatcttacagac
tccaataaggaaaatgaaaccgatgaggagaatacagaagtaatgattaaaggaggagga
cttaagcatgtcccttgtgcagaagatgaggacttcattcaggcattggataaaatgatg
ttggaaaatcttcagcaacggagtggtgaatctgttaaagtacatcagttggatgttgct
attcctctacatctcaaaagtcagctcaagaagggtcctccacttggaggtggggaagga
gagtcagagtctggagacacaatgccatttgtcatgttaacacgaaaaggcaacaaacag
caggtaagattcattggtgctgctgaaactagaaatcttcactgtaaggaagtacttact
gatgaaaatggaacgtgctgtgcttccttccggag
DBGET
integrated database retrieval system
