Fulmarus glacialis (Northern fulmar): 104072384
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Entry
104072384 CDS
T08370
Name
(RefSeq) LOW QUALITY PROTEIN: usherin-like
KO
K19636
usherin
Organism
fga
Fulmarus glacialis (Northern fulmar)
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
fga03037
]
104072384
Cilium and associated proteins [BR:
fga03037
]
Primary cilia and associated proteins
USH complex and associated proteins
104072384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Galaxin_repeat
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
104072384
NCBI-ProteinID:
XP_009571104
LinkDB
All DBs
Position
Unknown
AA seq
2937 aa
AA seq
DB search
IITSYGLYMDGVLMQNSSQLSCYAYGLAPWSLHSFRVQACTAKGCALGPLVEARTMEASP
EGTVDIFATIDGSKEIKLKWLAPNKPNGKLTYTVLVTGLFYADQANANYSIVNGTRTLCS
SNESNVWVPIKGLIPFSNYTVQVNASNSQGSLISDAITIVMPPGAPDGVMPPRLSSATPT
SLQVVWSTPVRNNAPGAPSYRLQMRRRHSAGDILDLLSSPTASLQHRVGDLQPYTEYEMR
VVASNGYGHAYSNWTSMTTAEDKPGPLDPPLLLNVTARAASISWQHPLKQNGIITHYNIY
QNGQLHATVLGTRSNCTVQDLHPYTVYVFQVEGCTSKGCSLSPETPAIWTLPDAPEDIPA
PELFSDTPTSVVISWQPPAHPNGLVENVTIERRVKGTEQISTVVTLPFSQSMSYIDQSTA
LSPWQKFEYRMLMSTLHGGENSSAWSEVTTRPSRPAGVQPPGAEALGPHSVKVSWKPPLI
QNGEILNYEIRMPDPRIVITGNTSSTLSHLVTNLIPYTNYSVTVIACSGGDGFLGGCTES
LPTSVTTPSTVPQSVSPLSVTPISESFIAISWQPPLRPNGPHLRYELLRRKIQQPLASNP
PEDLNLWHNIYSGTQWFYEDKGLSRYTTYEYKLIVHNEVGYTSSEEVIATTLAGLPEKGS
LLIARAVNHTAVEVEWSKPTLQDLQGDVAYYTLSLNSTDDRRSLRIEADVNSIVIDDLQP
NTEYQIFFQVFNGAHSINSEVVHVTTSDGEPEGMFPPEVVIINSTAVRVIWTSPSNPNGV
VTEYSIYVNNKQYKTGMNEPGSFLLADLSPFTVYDIQIEACTVYACVRSNGTHITTVEDE
PKQLSAPIIHIIGSRSLQINWTSPEQPNGIILGYELLRKAWQRCTPSKTPRSSKSNRMCI
SLECKKHENICGEVCYHPELKVCCNGILHDNKPGFQCCEDKYIPFIPNSPGVCCGGQIHA
VQPKHRCCGGYYTRVLVGEVCCPNEEQNRVSVGIGDSCCWGVPYSTSGNQICCGGSLHDS
FNQQCCGGEVISTDLVCCGDEEEGTAHRPLTGMFCCGQEYVNMSDTICCSGSSGEFLAHV
RKNDQVPVKCCETELIPKSEECCNGVGYNPLKYVCSDKISAGMMMKVKEECKANILCPLV
MEATAHCGKCDFDPRENICAWIKGSQSATEKEIKEGVCPAEEETVYTGSPNQYSFTDLNL
KPFITYEYRVAAWNSYGRGFSEISRAVTKQDVPQGVSPPKWAKVDNREDMILLNWEEPLQ
PNGLVIHYIILRNGIERFRGTEMSFTDTSGVQPYQEYSYQLRACTVAGCADSGKVVAVTV
QGVPESVQPPDISALNSTALHLSWIAPKKPNGIIREYHXLIYTDAASRMQHTVSGLQPYT
NYSFMLTACTSAGCASSQPLSGQTLQAAPHGVWPKPHHIIVSSTEVEIYWSEPKKPNGLI
TQYRLFRDGEQVFLGGSTDLNFTDVNLQPNSRYVYQLEASTWGGSNTSDKYVIQTPVGTP
EKIHVPYNVTVIDAYSIFLAWDMPGIFTVNVPLEYNILLNASSPTLLVKPVRHAHFAFVD
GLDPYTLYEIRIQACQNGGCGVGGQTYSRTAEAPPRELSPPVVKAMGSALIEVKWAPPKK
PNGIITNYFIHRRPVGSQEELLLFIWAEGALEFIDASDALQPFTLYEYRVRAQNAVGSVD
SLWASTQTLEASPWGMGAPWAQATSAYSVQLNWTQPVSPNGVISLYRVVYQEKRSDPTFS
IPAVTALTVMGTKHQAHLFGLKPFTTYHIHVVAVNNAGQVSSPWTSVRTLEASPSGLSNF
TVEKKENGRALLLKWSEPSQPNGVIKTYNIFSDDNLEYSGLSRQFLFRRLEPYTLYTLVL
EACNAAGCTRSPPQLVQTDEAPPVSQMAPVIQAVNATNVELSWLQPINPNGKIIRYEVIH
RCTKENAAGYRATTEDEKIVFTEYNTESNTFIYNDKGLQPWTRYDYKIRTWNAAGYADSS
WTVAKTSQTAPKGLAAPRLFLVSANPRKVLISWASPAQPNGILQSYRLLKNDILYPFSFD
AATFNYTDEDLLPYSMYSYAIVACTMGGCSTSEPAAIQTLEAAPALVDPPSLQAVSATQI
NASWAPPQIQNGDITKYILKLNNEEYYPGKSLQMFISDLQPYTQYDFALVACTAGGCTSS
ISQSVMTMEAPPLNMEAPRLLVMGSESIEITWKLPANPNGKITSYELRRDGVLVYSGLET
RYLDFTLMPGMEYSYTVTANNSQGSVTSPSAQIKTNPSAPSGMLPPRLQAWSSKEILVAW
DPPIKVNGDIRNYTISIHKPAETGKKTVDFDASHVSFVRRSYIVAELQPYSRYEVQLQAC
TELGCASSEWASVQTLEAPPAVQPAPLIEIQTRAGGFQSTSSLLWTGPQQPNGKILYYEL
YRRRTTRAHINLDLALVYNGSSTSFKDDKLLPYTEYEYQVWSVNSAGRTPSGWSRCRTGP
APPEGLGAPLFNTVASTVAVVNISPPLKPNGVVSIYRLFSNDTRGTDVVLSEGTATQQTI
HGLKPFTTYSIGVEACTCFNCCSKGPMAQITTQPAPPSEQPPPQIRTVTSRNASFQWSAP
QSPNGIVTSYELHVYMACPLNLQPAAKACSPGPTEVKYTGKGQSANVSNLEPYTTYNLRV
VSYNSVGSSASEWIGFTTEKEPPRYMAPFSVVSNLSTIHIDWSRTFVLNGRLKEYALTES
GQRIYSGFDTELYLPKTSDKTFLFQVTCITDEGSAMTPVIKYSAGDGVGLILTTPGEKDK
AESKRAKFYNELWFAVLMVVLGLILLAILLSLILQRKVHKQPYARDRPPLVPLQKRTSPM
SVYSSGETHPGLADTKIPGAGSPTSNRSVHIASGARRPSQSQLSRTYSQASLHRSVSQLL
DLYDKKSLVEESPWDAIIRNHRTTGRGLYVDEEDLVNVIKGFSTVTKEHTTFTDTHL
NT seq
8816 nt
NT seq
+upstream
nt +downstream
nt
gtattattactagttatggattgtatatggatggtgttctgatgcaaaattcatcacagc
tcagttgttatgcttatggacttgctccttggagtctgcattccttcagagtccaggcat
gtactgcaaaaggttgtgctttgggtccattggtagaagctcggaccatggaagcttccc
ccgaaggaacagttgatatatttgctactattgatgggtccaaagaaattaaattaaaat
ggcttgccccaaataaacctaacggaaaattgacctacacagtccttgtcactggtctct
tctatgctgatcaagctaatgctaattattctattgtaaatggtactcggacgttatgca
gcagcaacgaatccaatgtatgggtacccattaaaggactgattccattttctaactaca
cagtacaagtgaatgcttccaacagccagggcagcttgataagtgatgctataacaatag
tcatgcctccaggagctccagatggcgtgatgcctccaaggctttcatctgccactccga
ccagtcttcaggttgtctggtctacaccagttcgcaacaacgccccaggcgcgcccagct
atcgactccagatgcggcggaggcattctgctggtgacattttagatttgctttccagcc
ctactgcttccttacaacacagggtcggagatcttcagccatacactgaatatgagatga
gagtggttgcctccaatggttatggccatgcttatagcaattggacttcaatgactacag
cagaggacaaacccggacctttagatccaccacttctattgaatgttacagcaagggcag
caagcatctcttggcagcatcctttaaagcaaaatggcattatcactcattataatattt
accaaaatggtcaactgcatgctacggtgctaggaactagatccaattgcactgtacaag
acttgcatccttatacagtctacgtgtttcaggtagaaggatgcacttctaaaggatgtt
ctctttcacccgagaccccagcaatatggactcttccagatgcacctgaggatattcctg
ctcccgagctcttttctgatactccaacttctgtggtcatatcctggcaaccacctgctc
acccgaatggtttggtggaaaacgttacgatagaaaggagggtgaaaggaacagaacaaa
tatcaactgtggtgactctccctttcagtcagtccatgagctacattgaccagagtactg
ctctgagcccttggcagaaatttgagtacagaatgctgatgagcactcttcacggaggcg
agaacagcagtgcgtggtcagaagttaccactagaccatcaagacctgctggtgttcagc
cacctggtgcagaagcgttgggaccgcattcagttaaggtctcatggaaacctcctctga
tacagaatggtgaaatccttaactatgagattcgcatgcctgatccacgaattgtcatta
ctgggaatacttcatcaacattaagtcatttggtgactaatcttataccctatacaaact
actcggtcactgtaatagcttgttctggaggtgatggctttctaggaggctgcacagaga
gtttgcccaccagcgtgactacaccttcaacggttcctcagagtgttagtccattgtctg
tgactccaatcagcgagtcctttattgccatttcttggcaaccaccactaaggccaaatg
gtcctcatctgagatatgagctcctgagacgtaaaatccagcaaccacttgcatcaaatc
cccctgaagatttaaatctgtggcacaatatttactcaggaactcagtggttttatgaag
ataagggtcttagcaggtacacaacatacgagtacaagctcatagtgcacaacgaggtag
gatatacatcaagtgaagaagtgatagctactacattagcgggattaccagagaaaggaa
gtctcctcattgcacgtgctgttaatcatactgccgtagaagtggaatggtcaaaaccaa
cactacaagatttgcaaggagatgttgcatattacaccctctccttgaattctactgatg
acagaagatctctgaggattgaggctgatgtaaactctatagtcatagacgatttgcagc
ccaacacagagtatcagatattttttcaagtttttaacggagcccacagcatcaacagtg
aagttgtgcatgtgactacttcagatggagagcctgagggcatgttccctccagaggttg
tcatcatcaacagtacagctgtacgtgtcatctggacatcgccttcaaacccaaatggtg
ttgtcacagagtactctatctatgtaaataataagcagtacaagaccggaatgaacgagc
cggggtcctttcttttagcagatttgtctccattcactgtatatgatatacagattgaag
cctgcacggtgtatgcctgtgtgagaagcaatgggacccatattacgactgtggaagatg
agccaaagcagctgtcagcacccattattcacataattggctcaagatctcttcaaatca
actggacatcaccagaacagccaaatggcattatcctgggatatgaattactacgtaaag
cgtggcagaggtgtaccccatcaaagactccaaggagcagcaaaagtaatagaatgtgca
tctcattagaatgtaaaaagcatgaaaatatctgtggagaagtgtgttatcatccagagt
tgaaggtatgttgtaatgggattctgcacgacaataaacctggcttccaatgctgcgagg
acaagtacattccatttattcctaattcaccaggggtttgctgtggtggtcagatacatg
ctgtgcaaccgaaacatcggtgctgtggtggttattacactagggtattagtaggagaag
tatgttgccctaacgaagagcaaaacagagtttcagttggaattggtgactcttgctgct
ggggagtgccttactccacatcaggcaatcaaatctgttgtggtggatctctccatgaca
gtttcaatcagcagtgctgtggtggagaagtcataagcacggacttggtctgttgtggtg
atgaagaagaagggactgcacacagacctctcacagggatgttctgttgtgggcaggaat
acgtgaatatgtcagataccatatgctgctcaggttccagtggtgagttcctagcacatg
ttagaaagaatgaccaagtgccagtaaaatgctgtgagactgaacttattccaaagagcg
aagaatgctgtaatggagttggatataatcctttgaaatatgtttgctctgacaagattt
cagctggaatgatgatgaaggtaaaagaagaatgcaaggctaatatcctttgccctttag
ttatggaggcaacagcacattgtggaaagtgtgactttgatcccagggagaatatctgtg
cgtggataaaaggttcacagagtgctacagaaaaggagataaaggaaggtgtgtgtccag
ctgaagaggaaactgtctacacaggaagtccaaaccagtattcgtttacagacctgaacc
tcaaaccttttatcacatatgagtacagagtggctgcttggaatagctatggaagaggct
tcagtgaaattagcagagctgtcactaagcaagatgtgccacagggcgtaagtccaccaa
aatgggccaaagtggataatcgggaagacatgatacttctaaactgggaggaaccacttc
aaccgaatggtcttgttattcactatatcattctccgaaatggaattgagcgttttagag
gaacagaaatgagcttcacagacacaagtggtgtccagccataccaagaatattcatacc
agctgcgagcctgcactgttgctggttgcgcagacagcggcaaggtagttgcagtcactg
tccaaggagtcccagagagtgttcagccaccagacatcagtgctttgaactcaacagcat
tacatttaagctggattgcacccaagaaaccaaatggtatcatcagagagtaccatntac
ttatatacactgacgctgcaagcagaatgcagcacacagtgtcaggtctgcagccataca
ctaattacagcttcatgcttactgcatgcacatctgctgggtgtgcttctagccaaccac
tttcaggtcaaactttacaagctgctcctcatggggtatggccaaaacctcatcatatca
tagtcagctcaacagaagtggaaatctactggagtgaaccaaagaaacccaatggactca
ttactcagtatcgattatttcgtgatggagaacaggttttcctgggtggcagtacagacc
tgaatttcacagatgttaacctgcagcctaacagtagatatgtttaccagctggaagcca
gcacttggggcggcagcaacactagtgataaatatgttatacaaacaccagtgggaacac
cagagaaaattcatgtcccatataatgtcacagtaattgatgcatattctatatttctag
cctgggacatgccagggatattcactgtcaatgtgcctttggaatacaacatcttactaa
atgcgagcagtcccactctattggtgaagccagtaagacacgcacattttgcttttgttg
atggcctagatccttacaccctgtatgagataagaatacaagcatgccagaatggtgggt
gtggagtgggtggtcaaacatattcaagaactgctgaagcacctcctagagaattgagcc
cacctgtcgttaaagcaatgggatctgcactcatagaagtgaaatgggcaccacctaaga
aaccaaatggcatcattactaactacttcattcacagacgtcctgtgggcagtcaagaag
agctgcttttgttcatctgggctgaaggagctttggaatttattgatgcgtctgatgctc
tacagcctttcactctctacgaatatcgtgtcagagctcaaaatgctgtggggtcagtgg
acagcctgtgggcttcaacacaaactctggaggcttccccatggggcatgggagcccctt
gggcacaagcaacaagtgcatactcagtgcaattgaactggacccagcctgtctctccca
atggtgttatatctctgtatcgagtagtctatcaagaaaaacgcagcgatccaacattta
gcatcccagctgttacagcactaactgtaatgggaacaaagcatcaggctcatttatttg
gattgaaacctttcacaacatatcatattcatgtcgtagctgtaaacaatgccggacagg
tttcaagcccctggacatctgtgcgcacattggaagcttcacccagtggcctgagcaact
tcactgtggaaaagaaagaaaatggcagggctctgctgctaaaatggtcagagccctccc
aacccaatggcgtgattaagacctacaatattttcagcgatgacaacctggagtacagtg
gtttatctcgccagttcctcttcaggcgccttgagccatacactctctataccctcgtac
tggaggcttgcaacgcggcgggctgcactcgttctccaccccagctggtccaaacagatg
aagcacccccagtgtctcagatggcacctgtaatccaggcagtgaacgctaccaacgttg
aactgagctggttgcagccaattaatccaaatggaaaaataattcgctatgaagttattc
acagatgcacaaaagaaaatgctgcagggtacagagcaacgacagaagacgagaaaattg
ttttcacagaatataacactgaaagtaatacattcatatataatgataaaggtttacagc
cgtggacaaggtatgactataaaatacgcacctggaatgcagcaggctacgctgacagct
cctggacagtggcaaagactagtcaaactgccccaaaaggtctcgctgcccccaggttat
tcttggtgtcagctaacccccgtaaagtgctcatctcctgggcctccccagcacagccca
atggtattcttcagtcctacagactgctaaaaaatgatattctctatcctttcagcttcg
atgctgctactttcaactacacggatgaagacttgctgccctattcgatgtacagttatg
cgatagttgcctgtacgatgggaggctgctctaccagtgaaccagctgcaatacagacac
tggaagcagctcctgccttagtggatccaccgtctctgcaggctgttagtgccactcaaa
ttaatgcatcttgggcacctccccaaatacaaaatggagatatcaccaagtacatactga
aattaaacaatgaagagtattatcctggcaaaagtttgcaaatgtttatttctgatctac
agccttacacgcagtatgattttgcattggttgcctgtactgcagggggctgcacatcta
gcatatcccagtcggtgatgaccatggaggccccaccgttaaatatggaagctcccaggc
tgcttgtcatgggctcagagtcaattgaaatcacatggaaacttccagctaaccccaatg
gtaaaatcacaagctacgagctaaggagggatggtgttcttgtttactcaggtctggaaa
ctcggtatcttgatttcaccctaatgccaggcatggagtacagctacactgtcactgcaa
ataacagtcaagggagtgtgaccagcccatcagctcagataaaaaccaacccctctgctc
cgtctgggatgttgcctcctaggttgcaagcatggtcctcaaaggagattttggtggcct
gggatcctcctatcaaagtaaatggtgacattagaaattacacaatctctatccacaagc
ctgctgaaacgggcaagaaaactgttgactttgatgcatctcatgtttcctttgtgagac
ggtcgtacatagtggcagagctacaaccctatagtaggtatgaagtacagctccaagctt
gcacagagctgggttgtgcctccagtgagtgggcatcggtacagacgctggaggcgccac
cggcagtgcagcctgcccctctcatagaaatacagaccagagctgggggcttccagtcaa
cttcttccctcctgtggactggcccacagcagccaaatgggaagattttatactatgaac
tttacagaaggcgaacgactcgagcccacataaatttagacctcgcacttgtttacaatg
gttcttcaacctccttcaaagatgacaagttgctgccttacacagaatatgaatatcagg
tgtggtcggtaaactcagcgggccggacgccgagcggctggtcccgctgccggacaggcc
ctgcccctcctgagggcctgggagctcccctcttcaacacggtggcgtccacagtggctg
tggtgaacatcagcccccctcttaagccaaacggggtggtcagtatctacaggctgtttt
ctaatgataccagagggactgatgtggtgctgtcagaagggactgccacccagcagacaa
tacatgggctaaaaccttttaccacatactccattggcgtggaggcctgcacctgtttca
actgttgcagcaaaggacccatggcccaaatcaccacgcagccggctccaccctcggagc
agccccccccgcagatccgcaccgtgacctccagaaacgcctctttccagtggagcgccc
ctcagtcacccaacggcatcgtcaccagctatgagctccatgtgtatatggcttgccctc
tgaacctacagccagcagcgaaggcttgcagtcctggcccaactgaggtgaagtatacag
gaaaaggccagagtgccaacgtgtccaacctcgagccttacacgacttacaacctgcgag
tcgtgtcttacaactctgttggcagcagcgcctcagaatggattggtttcactacggaaa
aggagccacctcggtacatggctccattctccgttgtcagcaatttatccaccatccaca
tagactggagtcgcacttttgtactgaatggccgcctgaaggagtacgcgttaactgaga
gcgggcaacgcatctacagtggctttgacactgagctgtatttaccaaagacatctgaca
aaacctttttgtttcaagtgacctgtatcaccgatgaagggagcgccatgacaccggtca
tcaagtacagcgctggagacggagttggtctgatcttgacaacacctggagagaaggaca
aagcggagtccaaacgtgcaaaattctacaacgagttgtggtttgcagtgctgatggtag
ttctaggtttgatcctcttggctattcttctctccttaattctgcaaaggaaagtccaca
agcaaccctatgcacgagacagacctcctttagttccactccagaaaagaacgtcaccaa
tgagtgtgtattcatcaggtgaaacccatccggggctggcagatacgaaaattccaggag
ctggttctcccacgagcaaccgcagtgtccatatcgcatctggggcaaggagaccaagtc
agagccagctaagtcgcacatattcccaagcctctcttcatcgtagtgtcagccagctgc
tcgacctctatgacaaaaagtctcttgttgaagaatcaccttgggatgccattattcgca
atcatcgcactactggtcgtggcttgtatgtagatgaagaagatcttgtcaatgtcatca
aaggcttcagcacagtcaccaaggagcataccacattcactgacacccacctctga
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integrated database retrieval system
