Fulmarus glacialis (Northern fulmar): 104072537
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Entry
104072537 CDS
T08370
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104072537 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fga03041
]
104072537 (PRPF40A)
Spliceosome [BR:
fga03041
]
Complex A
U1 snRNP components
U1 related factors
104072537 (PRPF40A)
Complex B
104072537 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
104072537
NCBI-ProteinID:
XP_009570333
LinkDB
All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
MGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGMMM
SHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQTTHPVVCAAQQTATTNSSVNEEHSKQKST
WTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTK
ESRWAKPKELEDLEAMIKAEENSTKPEESTPTTSAPAAAAEATNTTTTATTAAEGAAAVT
TTTAASAATAAPEAESAAASSVVENESTGTAAAEEQGQATSTPAVQEQSGEAAANAADDS
SKQEASGDAASKKEDDDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMII
NDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRY
KKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMAN
VTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRE
RRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPGSTALDLFKF
YVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIKLAFNS
LLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKEPAFEDI
TLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSESEDDDSHSKK
KRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDIEREKDKKERERES
EKDRARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgggacacccaggcatgccacattatcctcccatgggaatgcacccgatgggtcagaga
ccaccaaatatgccgccagttccccacggtatgatgcctcagatgatgccccccatggga
ggaccaccaatggggcagatgcctggaatgatgcagtcagtaatgcctggaatgatgatg
tctcacatgtctcaagctgctatgcagcctacagttccgccaggggtgaacagtatggat
gcacaagtaggtgtaacacctcctggaactcagacaacacatcctgtagtttgtgcagcc
cagcaaactgccacaaccaacagttctgttaatgaagagcactctaaacagaaatctacg
tggacagaacacaaatcacctgatggaagaacatattattataatactgaaacaaagcag
tctacatgggagaagccagatgatctcaaaacacccgctgagcaattgttgtctaagtgt
ccctggaaagagtataaatctgattctggaaagccctactattataattcccaaacgaag
gaatcacgctgggcaaaacccaaagagcttgaggatcttgaagcaatgattaaagctgaa
gaaaacagcacaaagcccgaagaatcgactccaacaacatctgctccagctgctgcagca
gaagccacaaacacaaccaccacagccacaactgctgctgaaggtgccgcagctgttact
accaccactgctgcttctgcagcaacagcagcccccgaagcagaatctgctgcagcttct
tctgttgtagaaaatgagagtactggcacagccgcagctgaggaacagggacaagcaact
tctacacctgctgtgcaggaacagagtggagaagctgcagctaacgcagcagatgactct
tccaagcaggaggcttcaggagatgctgcttcaaagaaagaggacgatgatgcccaacca
gttaaaaaaacctatacatggaatacaaaagaagaagcaaagcaagcatttaaagaactg
ttaaaagaaaagcgagtaccatccaatgcgtcttgggagcaagctatgaaaatgatcatt
aatgatcctagatacagtgctttggcaaaattaagtgaaaaaaagcaagcctttaatgct
tacaaagttcaaacagaaaaagaagagaaagaagaagcaagatcaaaatacaaagaagct
aaagaatccttccagcgttttcttgaaaatcatgaaaagatgacatccacaacaagatac
aaaaaagctgaacaaatgtttggggagatggaagtctggaatgcgatatctgagcgtgat
cgtcttgaaatttatgaagatgtcttgttttttctttctaagaaagagaaggaacaagcc
aaacagttacgaaagaggaattgggaagctttgaagaacatactagataacatggctaat
gtcacttactgtactacttggtcagaggctcagcagtatctgatggacaatcctacattt
gcagaagatgaggaacttcagaacatggataaggaggatgcactgatctgttttgaggaa
catatcagggcattggaaaaagaggaggaagaagaaaaacagaaaagtttgcttagagaa
agaaggcggcagcgtaaaaatagagaatcttttcagctatttttagatgaactgcacgag
catggacaattacattcaatgtcctcttggatggagttgtacccaaccataagctctgac
atcagattcactaatatgcttggtcaacctggatcaacagcacttgatcttttcaagttc
tatgttgaagacctgaaagcacgttaccatgatgaaaagaagataataaaagatatctta
aaggataaaggatttgtggttgaagtgaatacttcttttgaagattttgttacggtcatc
agttcaactaaaagagctactactttagatgcaggaaatatcaagctggctttcaacagt
ctgctagaaaaggcagaagcccgtgaaagagagagggaaaaagaagaagctcgcaaaatg
aagcggaaagagtctgccttcaagagtatgttgaagcaagctactcctccaattgaattg
gatgctgtctgggaagatatcagagatagatttgtgaaggaaccagcatttgaagacatc
actctggagtctgaaagaaaaagaatatttaaagatttcatgcacgtactagagcacgag
tgtcagcatcatcattcaaagaacaagaaacattctaaaaagtctaaaaaacatcacagg
aagcgatcacgttctcgttcgggctcagagtctgaggatgatgatagccattcaaagaag
aaaaggcagcgttcagaatctagatcagtttctgagcgttcttccagtgcagaatctgag
agaagttacaagaagtcaaaaaaacataagaaaaagagcaagaagagaagacataagtct
gattcaccagaatcggatattgaacgagaaaaagacaaaaaagaaagagagagagagagc
gaaaaagatagagctagacaaagatctgaatcaaaacataaatctcctactaaaaaacga
cctggaaaagattccgggaactgggacacttctggcagtgaactgagtgaaggggagttg
gaaaaacagaggaggactcttttggaacaactggatgaagatcaatga
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