KEGG   Fulmarus glacialis (Northern fulmar): 104073369
Entry
104073369         CDS       T08370                                 
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
fga  Fulmarus glacialis (Northern fulmar)
Pathway
fga03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104073369 (SF3B3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fga03021]
    104073369 (SF3B3)
   03041 Spliceosome [BR:fga03041]
    104073369 (SF3B3)
   03036 Chromosome and associated proteins [BR:fga03036]
    104073369 (SF3B3)
Transcription machinery [BR:fga03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     104073369 (SF3B3)
Spliceosome [BR:fga03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104073369 (SF3B3)
 Complex B
    104073369 (SF3B3)
 Complex C
   U2 SnRNP specific factors
    104073369 (SF3B3)
Chromosome and associated proteins [BR:fga03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     104073369 (SF3B3)
    TFTC complex
     104073369 (SF3B3)
SSDB
Motif
Pfam: Beta-prop_RSE1_1st CPSF_A Beta-prop_RSE1_2nd Beta-prop_BBS7 WDR55
Other DBs
NCBI-GeneID: 104073369
NCBI-ProteinID: XP_009571388
LinkDB
Position
Unknown
AA seq 1217 aa
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgtttctctacaacctgacgttgcagcgtgccaccggcattagctatgctatccatggc
aatttctcaggaaccaaacaacaagaaatcgtcgtttcccggggcaagatcctggagtta
ctccgccccgatcccaacacagggaaggttcacaccctgctgaccgtggaagtgtttgga
gtcattcgctccctcatggcctttaggctgacaggcgggaccaaagactatatcgtcgtg
ggcagcgattcgggacgcattgttattctggagtaccagccctcaaagaacgtgtttgag
aagattcatcaggaaacctttggcaagagtggatgtcgcagaatcgttccaggccagtac
ttggctgtagacccaaagggccgtgctgtcatgatcagtgcgattgaaaagcagaagctg
gtgtatatcttgaacagagatgctgctgctcgtctcaccatttcctccccgctggaagcc
cacaaggccaataccttggtctaccacgtggtgggagtcgatgtggggtttgaaaaccca
atgtttgcttgtctggaaatggattatgaggaagcggacaatgatccaacaggagaagca
gcagccaacacacaacagacattgacattttatgaactggacttgggtttgaaccacgtt
gttaggaaatacagtgagcccttggaagagcacggcaacttccttattacagttcctggt
ggttctgatgggcctagcggagtgctgatctgttctgaaaactatattacttataaaaac
tttggtgaccagcctgatatcagatgcccaattcctaggagacggaatgacttggatgac
ccagagaggggtatgatttttgtctgctctgctacacataagaccaagtccatgttcttc
ttcctggcccagacagagcagggagacatcttcaaaattactctggagactgatgaagac
atggtaacagagattcgactgaagtactttgacactgttcctgttgccgctgccatgtgc
gtgctgaagacggggtttctctttgtggcatctgaatttggaaaccattacctgtaccag
atagctcacctgggtgatgatgatgaggagccagagttctcttctgccatgcctcttgag
gaaggagatacgttcttttttcagccacgacctctcaagaacctggtgctggtggatgag
ttggacagtttgtctcctattctgtgttgtcagatagctgatctggccaatgaagacaca
ccccagttgtatgtggcttgtggtcgtgggccccggtcgtctctgagggttctaagacat
ggacttgaggtatctgaaatggccgtctcagagctgcctggtaaccccaatgctgtatgg
accgtgaggagacatgttgaagatgaatttgatgcctatatcattgtgtccttcgtaaat
gccacactggtgctgtctatcggagagactgtagaagaagtgactgattctggattcctg
ggtactacacccaccttgtcctgctctcttcttggtgatgatgctttggtgcaggtttat
ccagatgggatccggcacatccgagcagataagagggtaaatgaatggaagacaccgggg
aagaaaaccattgtaaaatgtgctgtgaaccagagacaagtagtgatagcactgactgga
ggagaactggtttactttgagatggacccgtcaggacagctgaatgagtacacagagaga
aaggagatgtcagccgacgtagtttgcatgagcctggccaatgttccccctggggagcag
cgctcccggttccttgctgttgggctggtggacaacactgtcagaattatttcccttgac
ccttcggattgcttacagccgctgagcatgcaggcccttcctgcacagcccgagtcgctg
tgcattgtggagatgggtggcacagagaagcaggacgagctgggggagaggggctccatt
ggcttcctgtacctgaacattggactgcagaatggtgtgctgctgcgaactgtcctggat
cctgttactggcgatctttccgataccaggaccagataccttggctcacggcctgtgaaa
ctcttccgagtccgaatgcaaggtcaagaggcggtgctggccatgtcaagccgttcctgg
ctcagttattcctatcagtcacgattccacctgactcccttgtcttatgagacactggag
tttgcgtctggttttgcttccgagcagtgcccagagggcattgtagccatctccacaaac
acactgaggattttggcactggagaagctgggggcagtcttcaaccaggttgccttcccg
ttgcagtacacaccccgaaaatttgtcattcacccagagagcaacaacctgatcatcatt
gagacagaccacaacgcgtacactgaggccaccaaggcacaaaggaagcagcaaatggct
gaggaaatggtggaggctgcgggtgaagatgagagggagttggctgcagagatggctgca
gcctttctgaacgagaatcttcccgagtccatctttggtgctcccaaggctgggaatgga
cagtgggcctctgttatcagggtgatgaaccccatccagggaaatacgttagatctggtc
cagctagagcagaacgaagctgccttcagcgtggctgtgtgccggttctccaatactggt
gacgagtggtatgtgctggtgggagttgccaaggacctgattctgaacccacgctcggtt
gctgggggatttgtctacacgtacaagctggtgaatagtggtgagaagctggagtttctg
cacaagacccctgtggaggaggttcctgcagccattgctccattccaaggtagagtctta
attggagttggaaagctgttgcgcgtttatgacctgggcaagaagaaactgcttcggaag
tgtgagaataagcacattgccaactacatctgtgggatccaaaccattgggcacagagta
attgtttcagatgttcaggagagtttcatctgggtgcgctacaaaaggaatgagaaccag
cttatcatctttgctgacgacacttatccccggtgggtcactacagcaactctcctggat
tatgacactgtggctggagcagacaagtttggcaacatctgcgtggtgagattgcctccc
aacaccaatgatgaggtagatgaggatcctacaggcaacaaagctctctgggacaggggg
cttcttaatggagcatcgcagaaggctgaagtgattatgaattaccacgtgggagagaca
gtgctttccttacagaagaccacactgattccaggaggctctgaatctcttgtctatacc
accttatcgggggggataggaatcttagtcccgtttacttcccatgaggatcacgacttc
ttccagcatgtggaaatgcacttaaggtctgagcaccctcctctttgtggacgagaccat
ctcagtttccgctcctactacttcccggtgaagaatgtgatcgatggggacctgtgtgag
cagttcaactccatggagcctaacaaacagaagaatgtggccgaagagctggaccggacc
ccacccgaggtgtccaagaagctggaagacatccgcacgcgctacgctttctga

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