Fulmarus glacialis (Northern fulmar): 104073532
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Entry
104073532 CDS
T08370
Symbol
HELZ
Name
(RefSeq) LOW QUALITY PROTEIN: probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
fga
Fulmarus glacialis (Northern fulmar)
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fga03019
]
104073532 (HELZ)
Messenger RNA biogenesis [BR:
fga03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
104073532 (HELZ)
3'-5' decay
Other 3'-5' decay factors
104073532 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_30
AAA_19
UvrD-helicase
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_16
AAA_5
AAA_7
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
104073532
NCBI-ProteinID:
XP_009571639
LinkDB
All DBs
Position
Unknown
AA seq
1936 aa
AA seq
DB search
MADRRPEKSCEQACESLKQQDYEVAVKHCTEALLSLSQYPPAHLPEACQAEIDRIKIETL
LYRIASFLQLKKYGQADEDCRHVLGEGLAKGDGSFRAVLCCMHLKGKLQIVSNVLSKSLM
GESLNGMVTKDLTRLKTLLAETEAAGKVPSGYHVEDLEGGSRDGWQFRPPPRGVTSSEEY
TLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCSGSYMETLIE
KWMNSLSPEKVLSECVEGVRVEHNPELSVTVTTKKSHQTWTFALTCKPARMLYRVALLYD
AHRPHFSIVAISAGDSTTQVSQEVPENCQEWIGGKMVQNGIDHYIYKVSIAFNTEIFGTF
RQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVEFEPNET
TELEKSLLTRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNIK
VQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVTK
EKSAQTQGTKEKVYEAAIEEKTKDYIFLRVSRECCEELNLRADCEMQVELQFQLNRLPLC
EMHYALDRIKDNSILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQL
PPVLIIGPYGTGKTFTLAQAVKHILQQQDTRILICTHSNSAADLYIKDYLHPYVEAGNPQ
ARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQL
DLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNLH
VSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPLT
FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVF
RIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDSTE
DLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHGIT
FEQIKAQLEALELKKTYVLNPLAPEFIPRALRHQHSANTTKQQQSPPKGKVHHHNQNDHF
PPDGIVQPNPSVLIGNPIRAYTPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYG
GNMVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQAHGRGSPIPYGLGHHSPVS
IGQQQQLQHQDKEQHEQSRNGKSENTAGPEICKIRTPEKKPMESKQVDLEANSQNRSPES
RSSVGYPNAKFHRKDNLNPRQLNLHLTPPHSQYAVPNRHFQHVSQIPRQPYPLQQQQNLL
SQQQNHLPEQQNQMPPQQSQVVQQHNHLNQQPPQPSQLSPAYQAGPSQSFFNNPIPHRPH
SPAVDAVISEQHPPPMLQEVSNPLRPVAQHNPVLPTHLNNFIXMPLGDTLDRMHGNVALE
TIRQQQQARLQQWNEHNAYLSQGTIPYQHHHHPHLPHLPQQPIGLHQQQQVRANWKLASN
TEDETEATYSRFQDLLRELSHRDQSESRDVAEMPPPQSRLLQYRQVQPRSPPALPSPSCN
SNHSGHFPNFTENNRDIEIPSNPAFQQHLPQIYNPPFSMPSEHITPSPLKYLQPDGSWTY
ANLQQNHLMGQGFHYGIPPLPHRSQQNPFIQIQNHQHAVGQEPFHPLTSRAVSASSLHSL
EEYEPRGPGRPLYQRRISSSSVQACSEELSTPQDSLGQCKELQDHSNQSSFNYSSPELWV
NSSSSAPYPNIPCNGANRAVPPRELLAPPKTVRPPEEHLKAENIQLSNSFNYSVLQHLGQ
FPPLMPNKQIVESNSNSQQNAGGSKPVMSYASALRAPPKPKPPPEQTKKNSDPLSLFQEL
SLGSSSGSNGFYSYFK
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaagtcatgtgaacaagcatgtgaatctcttaagcagcag
gattatgaagtggcagtgaagcattgcacagaggctctcctttccctcagccagtacccc
ccagctcacctcccggaggcatgccaggcagaaatcgaccgcatcaaaatcgagactctt
ctgtatagaattgcttcctttttacaacttaaaaagtatgggcaagcagatgaagactgt
aggcatgtgctgggagaggggctggccaagggagatggatctttccgtgcagtgctctgc
tgcatgcatcttaaagggaagctgcaaattgtgtctaatgttctttccaaatcactgatg
ggtgaatcactgaacgggatggtaactaaagatctgacacgactgaaaacacttcttgct
gaaacagaggcagctggtaaagtaccatcagggtatcatgtagaagatttagaaggaggg
tcccgggatggctggcagttccgccctccacccaggggagtcacaagcagtgaagaatat
acgctatgtaaaagatttttagagcaagggatctgcaggtacggtgcacagtgtacttca
gcacattcccaggaagagctaacagaatggcaaaaacgatatgcttcccgcttgatcaga
ttaaaacagcagaaggaaaacaaacaatgttcgggcagttatatggaaacgttgattgag
aaatggatgaattcgttatctcctgagaaagtgcttagtgaatgtgtagaaggagtgaga
gtagaacataatcctgagctatcggtaactgtcaccaccaaaaagtctcatcagacatgg
acatttgctctcacttgtaagcctgcaagaatgctgtatcgagtggcattgctttatgat
gcccatcgtccacattttagtatcgttgcaatatctgctggagacagcactacccaggta
tcacaagaagttccagaaaactgtcaggaatggataggaggaaagatggtccagaacgga
atagatcattatatatacaaagtcagtatagcctttaacacagaaatctttggaactttt
cgccaaactgttgtgtttgattttggattagaaccagtcctcatgcaacgagtaatgatt
gatgctgcttcaactgaagatcttgaatacctgatgcatgcgcggcaacagctactaacc
acagctaagcgttgggattctacttctaagactattgtagaatttgagcctaatgaaact
actgaattggagaagagccttcttaccagataccaaatccctctatctgctgaccagcta
tttacacaatctgtcctggacaaatcattgaccaagaccaattatcagtcacggctacat
gacctcctttatatagaggaaatagcacagtataaggaagttagcaagttcaacataaaa
gtgcaattgcagattgtagcaagcttcatgctcactggtgtttctggaggtgcaaagtat
gcccaaaatggacaactttttggccgctttaagctcactgaaacgctttcggaagacact
ttggctggacggctggtgatgaccaaagtcaatgctgtttatttattgcctgtcactaaa
gagaagtcagcacagacccaaggaaccaaagagaaggtttatgaagcagctattgaggag
aaaacaaaggattatatcttcttgagggtatccagggaatgctgtgaagaacttaatctt
cgggcagattgtgaaatgcaggttgaacttcagtttcagttaaatcgcttacccctctgt
gaaatgcattatgccttggacaggattaaggacaacagtattttgtttccagatgtcagc
atgactcccaccataccctggagtcccaacagacaatgggatgagcagttggaccctcga
ctaaatgctaagcagaaagaggctgttctggctatcactactccactttcaatacaactg
cctcctgttcttatcatcggtccctatgggacaggaaaaacgttcactctggctcaggca
gtcaagcacatactccaacaacaggatactaggattctcatttgcacccattctaatagt
gctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccccag
gcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccacccagttgtg
catcagtactgtttgatttcaagcacacattccacctttcagatgccacagaaagaagac
attcttaagcaacgagtagtagttgttactttaaatacatcacagtatctatgtcaactg
gatcttgaaccaggtttttttacacacattctgttagatgaagctgcgcaagctatggag
tgtgaaactattatgcctctagcattagctaataaaaacacaagaattgtcttggctgga
gaccatatgcagctcagtccttttgtctacagtgaatttgccagggaaagaaaccttcat
gtttcattgcttgatcggctctatgagcactaccctgcagaatttccatgcaggatcttg
ctgtgtgagaactatcgctcccatgaagctatcatcaattatacatccgaacttttctat
gaaggcaaattgatggcaagtggaaagcagccagcacacaaagatttctaccctttgact
ttcttcacagcacgtggagaagatgtgcaggagaaaaatagtacagctttttacaataat
gcagaggtgtttgaagtagtagagcgtgttgaagaattaagaagaaaatggcctgttgcc
tggggcaaattggatgatggcagtataggtgtcgtaacaccttatgctgatcaagtgttc
agaattcgggctgaacttcggaaaaaaagactgtctgatgtcagtgtagagagagtgcta
aatgttcagggaaaacagtttagagttttgtttctcagcacagtacgaacacggcataca
tgcaaacataagcaaacaccaattaaaaggaaagagcagttactggaggattcaacagaa
gacttggattatggttttctgtctaattacaaacttctcaacactgccattacaagagca
caatccttggtagctgtggtgggagatcctattgctttatgttccattggaagatgcagg
aaattttgggaaaggtttattgccctatgtcatgagaatgaaagtctccacggtatcaca
ttcgaacagatcaaagctcagttggaagctttggagttaaagaaaacttatgtgttgaac
ccactggctcctgagtttatccctcgagctcttcggcatcaacattcagcaaataccacc
aaacagcagcagtcaccaccaaagggcaaggtccatcatcataaccagaatgaccatttc
ccacctgatggaattgttcagcccaatccttctgttctaatcggaaatcctatcagagca
tatactcctccccctcctcctctgggacctcaccccaatctggggaaatctccaagtcct
gttcaaaggatagatccacacactgggacaagtattctatatgtacctgctgtctatgga
ggaaatatggtcatgtctgtgcctttgcctgtaccatggacggggtatcagggtaggttt
gcagttgaccctcgaatcattactcatcaagcagctatggcatataatatgaacctgtta
caggcacatgggcgtgggtctcctataccttatggcctgggacatcattcaccagttagc
ataggacaacagcagcagcttcagcatcaagacaaggagcaacatgaacaaagtcgaaat
ggtaaaagtgaaaacactgctggacctgaaatctgtaaaattcgaacacctgagaagaaa
cccatggaatccaagcaggttgacttagaagcaaattctcagaatagaagcccagagtca
cgttccagtgttggttatcctaatgctaaatttcatcgcaaagataatcttaaccccagg
cagctgaatctacatctcaccccaccccactcacagtatgcagttcccaatcgccacttc
cagcatgtgtcacagataccaaggcagccatatcctctgcaacagcagcaaaacctttta
agtcaacaacaaaatcatttgcctgaacaacaaaaccaaatgccaccccagcaaagccag
gtagttcagcagcataatcatttgaatcagcagcctccgcaaccttcgcagctttcccct
gcttaccaggcaggtcccagccaatctttttttaataatccaattccccaccgaccacat
tctcctgctgtagatgctgtgatttcagaacaacaccccccacctatgttacaagaagtc
agtaatcctttgaggcctgttgcacagcacaaccctgttctgccaacccacttgaacaac
tttattngtatgcccttaggggacactttagatcgtatgcatggaaatgtagctttggaa
acaataaggcagcaacaacaagccaggttacagcaatggaatgaacataatgcctatctc
agtcaaggcactattccatatcaacaccatcaccatcctcatctaccacatcttcctcag
caaccaattggattgcatcaacagcagcaagttagggcaaactggaaacttgccagtaat
acagaagatgaaacagaggcaacatattcaagattccaggatttgctcagagaactgtca
caccgtgatcaaagtgaaagtcgggacgtagctgaaatgccaccccctcagtcaagactg
ttgcaatacagacaagttcagcccagaagcccaccagcactcccttctccttcctgcaac
tctaaccacagtggtcactttcctaacttcactgaaaacaacagagacattgaaataccc
agtaacccagcatttcagcagcatttaccccaaatatacaatccccctttctcaatgcca
tctgaacatataaccccatctcccttgaaatacctgcaacctgatggatcgtggacttat
gctaacctacagcagaatcaccttatggggcagggctttcattatggtatacctccattg
ccccataggtcgcaacaaaacccttttatacaaatacagaatcatcagcatgcagttggt
caggagccatttcatccactcacatctcgagcagtatctgcttcttcgctccacagctta
gaagagtatgaaccaagaggaccaggcaggccgttgtaccaaagaagaatttcctctagt
tcagtccaggcttgttctgaagaattaagcactcctcaagacagtcttggtcaatgtaaa
gagcttcaggaccacagtaatcagtcatctttcaactattcatcacctgagttgtgggta
aactcctcctcatctgccccatacccaaacattccatgcaacggagccaacagagcagtt
ccacccagggagttgttagctccaccgaagacggtcaggcccccggaggaacacctgaag
gctgaaaacatacagctatccaattccttcaactacagcgtgctacaacatcttggccag
ttcccacctctcatgcccaacaagcagatcgtcgagtcaaacagcaacagccagcagaac
gctggtgggagcaagcctgtcatgtcctacgcaagtgctctgcgggctccgccaaagccc
aaacctcctcctgagcagacaaaaaagaatagcgaccctttgtctttgtttcaggaactt
agcctaggtagttcatcaggtagcaatggcttttactcctattttaaataa
DBGET
integrated database retrieval system
