Fulmarus glacialis (Northern fulmar): 104073876
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Entry
104073876 CDS
T08370
Symbol
YTHDC2
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
fga
Fulmarus glacialis (Northern fulmar)
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fga03041
]
104073876 (YTHDC2)
Enzymes [BR:
fga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104073876 (YTHDC2)
Spliceosome [BR:
fga03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104073876 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
R3H
DEAD
AAA_19
Ank_2
HA2_N
nSTAND3
Ank
AAA_22
ATPase
Ank_4
PhoH
AAA_23
AAA_7
AAA_16
SRP54
UvrD-helicase
AAA_29
AAA_30
Sigma54_activat
ABC_tran
ResIII
Motif
Other DBs
NCBI-GeneID:
104073876
NCBI-ProteinID:
XP_009572103
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MEFPSSFTSTERAFVHRLCQSLGLISKSKGKGANRYLTVRKKDGSELTHAVMTCCLAPST
KHAVRSLIQRFPVTNKERTELLPKTERGNACAVESENREVNKTSGRLNNGIPQVPVKRGE
SEFDSFRQSLPVFEKQEEIVKIIKDNKVVLIVGETGSGKTTQIPQFLLDDCYKNGTPCRI
FCTQPRRLAAVAVAERVAAERREKIGQTIGYQIRLESRVSPKTLLTFCTNGILLRTLMAG
DSTLSTVTHVIVDEVHERDRFSDFLLIKLRDVLQKQTNLKLIISSAALDANLFIRYFGSC
PVIHIQGRPFEVKEMFLEDILRSTGYTNKEMVKYKKEKQREEKQQSTLTEWCSARENNSK
LESQRQRSVPSATEEYNLLDDGGDAVFNQLTEKDVNCLEPWLIKEMDSCLSDIWLHKDID
SFAQVFHLILTENVSVDYRHSETSATALMIASGRGFLSQVEQLISMGASIHCKSSNGWMA
LDWAKRFGQTEVVDLLESYSASVEFGNLDESSLVQTSGSDLSAEDRELLKAYHHSFDDEK
VDLDLIMHLLYNICHSCDAGAILIFLPGYDEIVSLRDRILFDDKRFADNAHRYQVFMLHS
NMQTLDQKKVLKNPPSGVRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTML
KMVWISKASAIQRKGRAGRCQPGVCFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLL
APINCPIVDFLMKAPDPPPALIVRNAVQILKTIDAMDPWEDLTELGYHLTELPVEPHLGK
MVLCAVVLKCLDPILTIACTLAYRDPFVLPTLASQKRAAMLCRKRFTAGTFSDHMALLRA
FQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGADIRDVNT
NSENWAVVKAALVAGMYPNLVHVDRESLVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQ
AAAIQALPTDWLIYDEMTRAHRIANIRCCSVVTPVTVSLFCGPARLPSNALQEPSSFR
NT seq
3055 nt
NT seq
+upstream
nt +downstream
nt
atggaatttccttcttctttcaccagtactgaaagagcatttgttcaccgtctttgtcag
tctcttggactgatatctaaaagtaaaggaaaaggagcaaatcgatacctgactgtaagg
aagaaggatggatcggaactgacacatgcagtaatgacttgttgcttggctcccagtacg
aaacatgctgttcggagtttaattcagagatttcctgtcacaaataaagaacgaacagaa
cttctgccaaagacagagcgaggaaatgcatgtgctgttgaatctgaaaacagagaagtg
aacaagacaagtggacgacttaacaatggtatcccgcaagttccagtgaaaagaggagaa
tcagagtttgattccttcaggcaatccctaccagtttttgaaaaacaggaagaaattgtc
aaaataataaaggacaataaagttgttttgattgtaggagagactggatcaggaaaaact
actcaaattcctcagttcctccttgatgactgctacaaaaatggaactccctgtcgtata
ttttgcactcagccaagacgtttggcagctgttgctgtggctgaaagagtggcagcagaa
agaagagaaaagattggccagacaattggttatcagatccgattagaaagcagggtttct
ccaaagacactgttaacattttgcactaacggcatactgcttcgtacgctaatggcagga
gacagcactctatcaactgtgacacatgttattgtggatgaagtacatgagagggatagg
ttcagtgacttcttgttaataaaactgagagatgtgttgcaaaaacagactaatttaaaa
ctaattatttctagtgctgctctagatgcaaatctctttattaggtattttggaagttgc
ccagtaatacacatacaaggaagaccttttgaagttaaagagatgtttttggaggacatt
ttacgaagcactgggtatacaaacaaggagatggtaaagtacaaaaaagagaagcagcga
gaagaaaaacagcaaagcactcttactgagtggtgttctgctcgagaaaataatagcaaa
ctggaatctcagagacaaagatctgtcccaagtgcaactgaagagtataatctgttggat
gatggtggtgacgcagtatttaatcaactgactgaaaaagatgtgaattgccttgaacca
tggctaataaaagaaatggattcttgtctttctgacatctggttgcataaagatattgat
tcctttgctcaggtgttccatctcattctaactgaaaatgtcagtgttgattataggcac
agtgaaaccagcgcgactgcactaatgattgcttcagggagaggctttctgagtcaagta
gaacaactgatcagtatgggagcaagtatccactgcaaatcatcaaatggctggatggct
ttggactgggctaagcgctttggacagacagaggttgttgacctgttggagtcctacagt
gcttcagtggaatttggaaatctggatgaaagttccctggtccaaacaagtggtagtgac
cttagtgcagaggacagagaactgttgaaagcttatcatcacagttttgatgatgaaaaa
gtggatctggacctgattatgcacttactttataacatctgtcatagttgtgatgctgga
gcgattttaatatttcttcctggatatgatgagatagttagcctgagggaccgtattctt
tttgatgacaagagatttgctgataatgctcacagataccaagttttcatgcttcattca
aatatgcagactttggatcagaagaaggtgcttaaaaatccgccttctggcgtccgcaaa
ataattctgtctactaatattgcagaaaccagcataacagtcaatgatgttgtatttgtt
attgactcaggcaagatgaaagagaagtcttttgatgcactgagttgtgttacaatgcta
aaaatggtgtggatttcaaaagccagtgctatccagagaaaaggcagggctgggcgctgt
cagcctggagtctgttttcgtctcttcagcagactccgatttcagaatatgttggaattt
cagactccagaacttctaagaatgccacttcaggagctttgtttacacacaaaacttctg
gctccaattaattgtccaattgttgactttcttatgaaagctcccgatcctccaccagct
ttaattgtgagaaatgctgtgcaaatactgaagacaatagatgccatggacccttgggaa
gatctcactgaacttggttatcatctcactgaattaccagtagaaccacaccttggtaaa
atggtgttgtgtgctgttgtcctgaagtgcctggatcctattcttactattgcttgcact
cttgcatatcgagacccttttgtcttacctacactggcctctcaaaagcgtgcagccatg
ctgtgtagaaaacgttttactgcaggaacatttagtgaccatatggcgcttctccgggct
ttccaggcatggcagaaggcacgcagtgatggctgggagagagccttctgtgaaaagaac
ttcctgtctcaagccacaatggaaatcatcataggaatgagaacacagcttcttggccag
cttagagcctcaggttttgttagagccagaggaggagccgatattagagatgttaatact
aactctgaaaactgggctgtagttaaagctgccttagtggctgggatgtatcccaatcta
gtgcatgtagacagagaaagcctggttttgactggaccaaaggagaagaaagtgcgattt
catcctacctctgttcttagtcaacctcagtataaaaagattcccccagcaaatgggcaa
gctgcagccattcaggcactccctacagactggcttatatatgatgaaatgacgagagcc
cacaggatagcaaatatcagatgctgttctgttgtaacacctgtcactgtgtcactcttc
tgtggaccagctagattaccaagtaatgctttgcaggaaccttcatcttttcgag
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