Fulmarus glacialis (Northern fulmar): 104074010
Help
Entry
104074010 CDS
T08370
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
fga
Fulmarus glacialis (Northern fulmar)
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fga03041
]
104074010 (DDX1)
03016 Transfer RNA biogenesis [BR:
fga03016
]
104074010 (DDX1)
Enzymes [BR:
fga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104074010 (DDX1)
Spliceosome [BR:
fga03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104074010 (DDX1)
Transfer RNA biogenesis [BR:
fga03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
104074010 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
104074010
NCBI-ProteinID:
XP_009572269
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE
TLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATR
GVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDSYGEEF
TMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIPSHIRNQALFAACVLKNAELKFNFGEED
FKFPPKDGYIGLCKAPDGSVVKSQHSGNAQVVQTQNLPNAPKALIVEPSRELAEQTLNNV
KQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLNLSQVRF
LVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP
TWVDLKGEDSVPETVHHVVVLVNPKADKLWERLGKNHIRTDEVHAKDNTRPGANTPEMWS
EAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQFSCVCLH
GDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV
GRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTVWYNEMQLLGEIEEHL
NCTISQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEKEAQTSF
LHLGYLPNQLFRTF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttatgcctgagatagctcaagcagtggaggagatggactggcttcttcctaca
gatatccaagcagaatccatcccactgattctgggaggtggtgatgtacttatggctgct
gaaacagggagtggaaaaactggtgctttcagcattccagttatccagattgtttatgaa
acactgaaggaccagatggaaggcaagaaagggaaagcaactattaaaaccggtggggca
gtgctcaataaatggcagatgaacccatatgatagaggatcagcttttgcaattggatca
gacggtttgtgttgtcaaagcagagaggtaaaagaatggcatggatgcagagcaactaga
ggcgtgactaaaggtaaatactactatgaagtttcctgtcatgaccaaggcttgtgcaga
gttggttggtctactatgcaggcttcactagatttgggcactgataaatttggctttggc
tttggtggcactggtaagaaatctcacaacaagcaatttgacagctacggtgaggaattc
actatgcatgatacaattggatgttatctagacatagataaaggacaaataaaattttcg
aaaaatgggaaggaccttggccttgcgtttgaaatcccatcacacataaggaaccaagca
ctttttgcagcgtgtgtactgaagaatgctgaactgaaattcaattttggtgaagaagac
ttcaagtttccaccaaaagatggctatattggtctttgcaaggctcctgatggtagtgtt
gtaaaatcacaacactcaggaaatgcacaagtggttcaaacacagaaccttccaaatgct
ccaaaagcattgattgtagaaccgtcaagagagcttgcagaacaaactttgaacaatgtg
aagcagttcaaaaaatatgttgataatcccaaattaagggagctgttgattattggtggg
gttgctgcaagagatcaactctctgtactggaacaaggggtggatattgttgttggaact
cctggaagactggatgacctggtctcaacgggaaagcttaatttatctcaagttagattc
ctggttctggacgaagctgatggccttctcctccaaggttattcagatttcataaacagg
atccacagtcaaattcctcagataacttcagatggaaagagacttcaggtgattgtgtgc
tctgcaacactacattcttttgatgtgaaaaaactatctgagaagatcatgcattttccc
acctgggttgatttgaaaggggaagattctgtccctgaaactgtacaccatgtagttgtg
cttgtaaatccaaaagctgacaaactctgggaaaggctcggcaagaaccatatcagaact
gatgaagtacatgcaaaagacaatacacgacctggtgctaacactccagaaatgtggtct
gaagctattaaaattctaaaaggagaatatactgttcgggcaatcaaagaacacaagatg
gaccaagccattattttctgtaggactaaaatagactgtgataatatggagcagtacttc
atccaacagggtggaggccctgataggaagggacatcagttctcatgtgtctgtctgcat
ggtgacagaaaacctcaagaaagaaagcaaaacctggaaagatttaagagaggggatgtc
cgtttcttgatctgcacagatgttgctgctagaggaattgatattcatggtgttccgtat
gttatcaacgtcacactccctgatgaaaaacagaactatgttcatcgaattgggagagta
ggcagagctgagaggatgggtctggcaatctcccttgtggcaaaagagaaagaaaaggtt
tggtatcatgtatgcagtagtcgtggaaaagggtgttataatactagactgaaggaagaa
ggaggttgtaccgtatggtacaatgagatgcagttgctgggggagatagaagaacactta
aactgcactatttcccaagttgaaccagacataaaagtaccagtagatgattttgatggg
aaagttacatatgggcagaaaagagctctgggtggtgggctgtataaaggccatgtggat
attctggcacctacagtacaagagttggctgcccttgaaaaggaggctcagacatctttc
ttgcatctcggctatcttcctaaccagctgtttagaacattctga
DBGET
integrated database retrieval system
