Fulmarus glacialis (Northern fulmar): 104075487
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Entry
104075487 CDS
T08370
Name
(RefSeq) LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104075487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fga03041
]
104075487
03009 Ribosome biogenesis [BR:
fga03009
]
104075487
Enzymes [BR:
fga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104075487
Spliceosome [BR:
fga03041
]
Complex A
U2 snRNP components
U2 related factors
104075487
Complex B
104075487
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104075487
Ribosome biogenesis [BR:
fga03009
]
Eukaryotic type
90S particles
Helicases
104075487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
HA2_N
DEAD
Helicase_C
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Motif
Other DBs
NCBI-GeneID:
104075487
NCBI-ProteinID:
XP_009574312
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQ
IPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSA
KTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVI
VMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEE
GDLLLFLTGQEELXSVVSILIQMDNLRTWVTLSQVACRQSQAKLETLTGHLADLNVVVLK
RNGIINDWAVVNSFEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPP
KKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASA
QQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFD
FMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNE
VLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYD
NFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVCVHS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgattccacacagtattaaccctttcacaaatctaccacatacaccgcgatattatgac
atcctgaaaaaaaggttacaacttcctgtctgggaatataaagaaagatttacggatatt
ttgattaggcatcagtcatttgtgctggttggagagactgggtctggtaaaacaacacag
atccctcagtggtgtgttgactacatgcgctctctacctggaccaaagaggggagtagca
tgtacccagcctaggagagtagctgcaatgagtgtggcgcagcgagttgctgatgagatg
gatgtcatgctgggccaggaggttggttactctattcgatttgaagactgcagtagtgca
aaaactattttgaagtatatgactgatggtatgttacttcgtgaagcaatgaatgatcct
ttgctggagcgctatggtgttataattcttgatgaggcccatgagagaacactggctact
gatattttgatgggcgttttgaaggaagttgtaagacaaagatctgatttgaaggttata
gttatgagtgctactttagatgctggcaagtttcagatctattttgataactgtcctctt
ctaactatcccgggtcgcacccatcctgtggagatattctatactccagaaccagaaaga
gactaccttgaggctgccattcgaacagtgatccaaattcacatgtgtgaagaagaggaa
ggagatctcttactctttcttactggacaggaggagctttgaagtgttgtatccattttg
attcagatggataacctgagaacctgggtaactctaagccaggttgcctgtcgtcagtca
caagcaaaattggaaactctgacaggtcacctagctgacttaaatgtagttgttctaaaa
cgaaatggcattataaatgattgggctgtggtgaactcttttgagattgatgaagcctgc
aagaggataaaacgggaaattgatgatttaggccctgaagttggtgacatcaaaatcatt
ccattgtattccacccttcctccacagcaacagcaaaggatttttgaacctcccccgcca
aaaaaacaaaacggagcaataggaagaaaggtggttgtgtccactaatattgctgagaca
tcattaacaatagatggtgttgtgttcgtgattgatcctggctttgcaaaacagaaggta
tacaatcctcgtatcagagtggagtctctcttggtgactgcgattagtaaagcttctgct
cagcagcgagctggccgtgctggtcgaactagaccaggcaagtgcttcaggctttataca
gagaaggcttacaaaactgaaatgcaggacaacacataccctgaaattttgaggtctaac
ttaggatctgtagtattgcagctcaagaagcttggtatagatgatttggtgcactttgac
tttatggatcctccagctcctgaaactttgatgagagccttggagcttttgaattatctg
gctgctttaaatgatgatggagacttgactgagttgggatccatgatggctgaatttcca
ttggacccacaactggctaaaatggttattgcaagttgtgactacaactgttctaatgag
gtcctatctattactgccatgttgtcagtcccacagtgttttgttcgccccacggaagca
aagaaagcagcagatgaagccaagatgaggtttgcccacatagatggagatcatttgacg
ttgctgaatgtctaccatgctttcaaacaaaatcatgagtcagttcagtggtgttatgac
aacttcattaactacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacga
atcatggatagatttaatttgcctcgtagaagcacggactttaccagccgtgactattac
atcaacataagaaaggcgttagttactgggtatttcatgcaggtatgtgtgcattcttga
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