Fulmarus glacialis (Northern fulmar): 104076036
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Entry
104076036 CDS
T08370
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104076036 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fga04040
]
104076036 (SCN8A)
Ion channels [BR:
fga04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104076036 (SCN8A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
IQ
FraC
Motif
Other DBs
NCBI-GeneID:
104076036
NCBI-ProteinID:
XP_009575030
LinkDB
All DBs
Position
Unknown
AA seq
1984 aa
AA seq
DB search
MAARLLAPPGPDSFKPFTPESLANIEKHIAELKKKQRPKQDSSHRDDDEDSKPKPNSDLE
AGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLRENFFFFRFSATPALYILSPFNL
FRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETYLDNGSRGF
DWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISK
LSSKSAKERRNRRKKRKDKELSEGEEKCDNEKVFKSESEDGMRRKAFRLPDNRLGRKFSI
MNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIP
IRGRDRRSSGYSQGSRSSRIFPNLRRNVKRNSTVDCNGVVSLIGGPPSSMPGGRLLPEVK
IDKAATDDSGTTEIEIRKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQ
RKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTMFMAMEHHP
MTPEFEHVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELGLAD
VEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQL
FGKSYKECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIV
FMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWIKAKVH
EFMQAHFKQREADEVKPLDELYDKKVNCIANHTGADINRDIDYQKNGNGTTSGIGSSVEK
YIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDDTSSSEGST
IDIKPEVEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVE
HNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGF
VKFFTNAWCWLDFLIVAVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVV
VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETAEERFEIDIVNNKTDC
EALMPPNSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYED
NIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLG
SKKPQKPIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYW
INLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLF
RVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYV
KHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDC
GNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFD
PDATQFIEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVL
GDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVIQRAYRARLARRGFI
SRRPVSTKLENGGANREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRRERAKRQKDVR
ESKC
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacggctgctcgcaccaccaggccctgatagttttaaacccttcactccggaa
tctctggctaacattgagaaacacattgcagaattaaaaaagaagcagcgtccaaagcaa
gacagcagccaccgggatgacgatgaagacagcaaaccaaaaccaaacagtgaccttgag
gcggggaagaatttgcctttcatctacggggacatcccaaaaggcctggttgctgtacca
ctggaggactttgacccttattatatgacccagaaaacctttgtagtactgagggaaaac
tttttttttttccgatttagtgccacacctgccttgtacattttaagtccttttaatcta
tttagaagaatagctattaaaattttgatacattcagtatttagcatgatcattatgtgc
actattttgaccaactgtgtattcatgacttttagtaacccacctgaatggtcgaagaat
gtggagtatacattcactggtatttatacatttgaatcacttgtgaaaattattgcaaga
ggtttctgtatagatggctttactttcctacgtgatccatggaactggctagatttcagt
gtgatcatgatggcatatgtcacagagtttgtggacctggggaatgtctcagcattgaga
actttcagagttctccgagctttgaaaactatctctgttattccaggcttgaagaccatt
gtgggtgccctaattcagtctgtgaagaagctgtcagatgtaatgatcttgacagtattt
tgtctcagtgtctttgctctgatcgggttgcagctgtttatgggcaatttacggaacaag
tgtgtgatatggccaattaatgtgaacgagacttacctggataacggctctaggggcttt
gactgggaggaatacaccaacaatatgtcaaatttttacataattcctggtgcccctgat
cctttgctctgtggtaacagctcagatgcaggtcaatgtccagagggttacacgtgcatg
aaagcaggacggaatcccaactatggttacacaagctttgacactttcagctgggctttt
ctggctttatttcgccttatgactcaggacttttgggaaaacttgtatcaattaacctta
cgagcagcaggaaaaacctacatgatcttctttgtcttggtgatctttgtgggatcgttc
tatctggttaatctaattttggctgtggtagctatggcttatgaagagcagaaccaggcc
acattggaggaggcagagcagaaggaggcagaatttaaggccatgttagaacaattgaaa
aagcagcaggaagaagcacaggctgctgctatggtcacttcggcagggacagtctctgaa
gatgctgtggaagatgatggtggggggaggatgtctcggagctcttcggagatttccaaa
ctcagttccaagagcgccaaggagcgtcgaaacaggaggaaaaaacgaaaggacaaggaa
ctgtcagaaggagaggagaagtgcgacaatgaaaaggtgttcaagtctgaatcagaggat
ggcatgaggaggaaagcattcaggctaccagataacaggctaggaaggaaattttccatc
atgaaccagtctctcctcagtatcccaggctccccttttctctcccgacacaatagcaag
agcagcatcttcagctacaaagggcgatttcgtgacccaggttcagagaacgagtttgcc
gatgacgagcacagcacggtggaggaaagcgaaggcaggcgggactccctcttcatcccc
atccgcggtcgcgatcgaaggagcagcggctacagccaaggcagccggtcctcgcggatt
ttccccaatctccgccgaaacgtgaagaggaacagcacggtggactgtaacggcgtggtg
tccctcatcggcggcccaccttccagcatgcctgggggtcgccttctgcctgaggtgaaa
atagataaggcagctaccgatgacagtggtactactgaaatcgaaattagaaagaaaccc
ggtgggtctctcttggtctcgatggatcaggtgaatgcatcctatggaagaaaggatcga
accaacagtgtaatgaccgggttgacaaatacccttgttgaggagctggaagagtcccag
aggaagtgtcccccttgctggtacaaatttgccaacacgtttttgatctgggaatgccac
ccgtattggattaagctgaaggagatagtgaacttaattgtcatggatccttttgttgac
ctggccatcaccatctgtattgtgctgaacactatgttcatggcgatggagcaccatcct
atgaccccagagtttgaacatgtgctctccgtaggaaatctggttttcactggcattttc
acagcagaaatgtttctgaagctcatcgccatggatccctactattatttccaagaaggc
tggaacatctttgatggatttattgtctccctcagtttaatggaactgggtctagcagac
gtggaaggactttctgtgctgcgatctttccgattgctgagagtcttcaaactggccaag
tcctggcccactctgaacatgctgataaaaatcatcggtaactcagtgggtgctttgggg
aacttgaccttggtgctagccatcattgtgttcatctttgctgtggtgggcatgcagctc
ttcggcaaaagctacaaggagtgtgtctgcaagatcaatccggagtgtgagctaccccgc
tggcacatgcacgatttcttccactccttccttattgtcttccgtgtgttgtgtggggaa
tggattgagaccatgtgggattgtatggaagtagcaggacaggccatgtgcttgattgtc
ttcatgatggtcatggtcatcggaaatttagtggtgctgaacctgttcttagccctgcta
ctgagctccttcagcgcagacaacttagcagcgaccgatgatgatggggagatgaacaac
ctgcagatttctgttattcgcatcaagaagggcattgcctggattaaggcaaaagtgcat
gagttcatgcaggctcatttcaagcagagagaggccgatgaggtcaaacccttggatgaa
ttgtatgacaagaaggtgaactgcatcgctaaccatacaggggctgatatcaacagagac
attgattatcagaagaatggcaatggcacgacgagtggaattgggagcagtgtggagaag
tacataatagatgaagatcacatgtccttcatcaataaccccaacctcactgtccgggtg
cctattgctgtaggtgaatcagattttgaaaatctcaacacagaagatttcagcagtgat
acagatcctgatggcagcaaagagaaacttgatgataccagctcctctgaaggtagcacc
attgatataaaacctgaagtggaagaagtccctgtggaggcaccagaggagtatctggac
ccagacgcgtgcttcactgaaggttgtatgcagcgctgtaaatgttgtcaggtcaatatt
gaggaagggctggggaagtcttggtggaccttgaggaaaacttgttttctgatcgtggaa
cataactggtttgagactttcatcatctttatgatcctactgagcagtggtgctctggct
tttgaggatatatacatagaacagagaaaaaccatccggaccatcctggagtacgcggac
aaggtcttcacgtacattttcatcctggagatgttgctgaaatggtgtgcttacggattt
gtcaagttcttcactaacgcctggtgctggctggatttcctcattgtggctgtctcttta
gtcagccttgtagctaatgccctgggctactcggaactaggtgccataaagtcccttagg
acactaagagctttgaggcctttaagagcgttgtcccgatttgaggggatgagggtggtt
gtcaacgccttggttggcgctatcccttccattatgaatgtgttgttggtctgccttatc
ttctggctgattttcagcattatgggggttaacctgtttgccgggaaatatcattactgc
tttaatgaaacagctgaggagcgctttgaaatagatattgttaacaacaagacagactgc
gaagctctgatgccacccaactccactgagattcgatggaagaatgtgaaaattaacttt
gacaacgttggggcaggatatctggctcttctgcaagttgctactttcaagggctggatg
gacatcatgtatgcagcagtagattccagaaagcaagaagagcaacccaagtatgaggac
aacatctacatgtacatatattttgttatcttcattatcttcggctcctttttcaccctg
aacttgttcattggtgtcatcattgacaacttcaatcaacaaaagaaaaagtttggaggt
caagatattttcatgacagaagaacaaaagaagtactataatgccatgaaaaaactgggc
tcaaagaagcctcaaaaacctattccccgacctctgaaccgcattcaaggagctgtcttt
gactttgttactcagcaagcgtttgatatagtcatcatgatgctcatttgcctcaacatg
gtgaccatgatggtggagacagacacacaaagcaagcagatggaggacatcctttactgg
atcaacctggtgtttgtcatcttcttcacctgtgagtgtgtgctgaagatgttcgccttg
cggcactattatttcaccatcgggtggaacatttttgacttcgtggttgtgattctgtcc
atcgtgggaatgttcctggctgaaatcattgagaagtattttgtgtcacccactctcttc
cgagtcatccgactggctcgcattggacgtatcctgcgtttgatcaaaggagccaaagga
atccgcaccttgctttttgccttaatgatgtccttgcctgccttgttcaacattggcctc
ttgctgttcttggtcatgttcatcttctccatctttggcatgtcaaactttgcctacgtc
aagcatgaggctggcatagatgatatgttcaactttgagacctttggcaacagcatgatc
tgcttgttccagatcaccacatcggctggttgggatggcctgctgctgcccatcttaaac
cggcctccagactgcgacctagacaaggagcaccctgggagtggttttaagggggattgt
gggaacccttcggtggggatatttttctttgtgagttacatcatcatctccttcctgatc
gtggtcaacatgtacattgccatcatcctggagaacttcagcgtggcgacagaggagagc
gcagatccactaagtgaggacgactttgagaccttctacgagatctgggagaaattcgac
cccgatgccacgcagttcatagagtacagcaagctcgcagactttgctgatgctttggaa
catcctctccgcgtccccaaacccaacaccattgaactcatcgccatggacctgcctatg
gtaagtggagacaggatccactgtttagacatcctgtttgccttcaccaaacgggtcctg
ggggacagtggagagctggatatactcagacaacagatggaggaaagattcgtggcgtcc
aacccttccaaagtgtcttatgagcctatcacaactacactgcggcgtaagcaggaagaa
gtttcggcagtggttatccagagggcttacagggctcgtttagcacgacggggctttatt
agccgcaggcctgtctccacaaaactggaaaatggaggagcaaacagggagaaaaaagaa
ggcaccccatctaccgcgtctctcccgtcatacgacagtgttaccaaacctgagaaggag
aaacagcaacgggcggaggaaggaagacgagaaagagcgaaaagacaaaaagacgtcagg
gaatccaagtgttga
DBGET
integrated database retrieval system
