Fulmarus glacialis (Northern fulmar): 104076446
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Entry
104076446 CDS
T08370
Symbol
COL4A6
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga04510
Focal adhesion
fga04512
ECM-receptor interaction
fga04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104076446 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104076446 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104076446 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fga04147
]
104076446 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
fga00536
]
104076446 (COL4A6)
Exosome [BR:
fga04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104076446 (COL4A6)
Glycosaminoglycan binding proteins [BR:
fga00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104076446 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104076446
NCBI-ProteinID:
XP_009575612
LinkDB
All DBs
Position
Unknown
AA seq
1646 aa
AA seq
DB search
GGKKSYSGPCGGRDCSAGCKCFPEKGARGRPGPIGLQGPIGAPGFTGPEGLPGAKGERGA
VGPPGPAGQKGDKGPMGVPGFQGINGIPGHPGQSGPRGLPGLDGCNGTTGSPGVSGSDGF
PGLPGLPGHPGPKGLKGEPVFAQGGLKGMKGENGLPGLDGISGPKGSPGPIGSAGPIGLP
GLQGPMGPPGPPGPKGNMGLGFQGEKGEKGDVGLPGPPGPPPSTGILEFMGFPKGKQGEK
GEPGPQGFPGDKGLPGMPGFGGVGEKGEKGVPGLPGGRGLLGLDGSDGIPGRKGHPGIPG
YPGLDGVEGMKGELGDIGPPGPPIVIDREGVVISGAPGDPGNPGIPGPPGDEGISGLPGL
PGAPGFPGLERDGMGSGGSPGIPGVKGEVGEPGRATIGLPGTPGRDGLRGLPGAPGLPGS
PRPSFPPDTILDGRTGAPGEPGQRGLPGALGPKGYKGEAGDCACDGGVTRAGLKGISGPP
GPSGSPGVPGIKGIGGDPGTVGAPGLRGPPASAGQQGLPGLKGEKGDSSYATGRGARGDR
GATAPRGPSGIPGTPGRDGLPGLPGPPGPPGDGGLGFPGEKGLPGLPGSKGHRGETGSPG
VGYPGPSGVRGPPGDPGMDGFPGQAGLPGPPGITLPCIVPGAYGPAGTSGFPGLPGPKGS
KGFPGIPGQPGLHGSKGQPGSPGIIGLQGEPGFPGPRGEQGSQGLPGLDGTDGLPGKMGA
SGLAGMKGAPGDVFGAESGALGERGRPGLPGDKGLTGDLGFPGPKGLDGRPGLLGIKGEQ
GNPGYSGVPGLQGPPGPGGPFGIKGKPGPLGSAGLAGAPGCQGLPGVKGLTGDVGPQGPA
GMKGFPGLDGAPGSPGERGFLGPPGPFGQDGHPGFSGPKGEKGSSGLLGFPGMPGLPGVA
GANGFKGTPGTAGGKGSPGVVGLQGQKGDRGDVGPPGLPVLGPPEQALQFKGDKGDPGLA
GLGGFPGPRGDKGIPGSRGQPGLPGPIGSASKERGLHGDPGFPGPSGQPGLPGQKGTHGI
IXMPGERGSDGITGTLGFPGPIGLPGPKGERGREGLKGEPGYPGNTGVHGLKGSPGDLGQ
EGPAGIPGNAGLRGIPGPPGPPGQPGSVGFPGARGTAGPKGFHGFPGLNGLNGLPGTKGS
PGTPGLSEAGLKGPAGLPGLKGEEGSPGLGRGALGFPGPKGSSGDMGPPGPVGLPGLPGT
PGASLPSDIRGRPGDAGYPGTDGSSGLPGPPGPRGPPGPASDQGDTGNPGFPGVLGLRGI
KGDVGPTGPIGLPGASGFKGVRGEPGLMGMPGKDGPPGDPGYPGLKGEMGRRGLPGRQGA
PGITPQPEEITAPAGLPGLPGIDGVPGFDGDPGFQGPAGKPGTKGLPGRSGLKGHDGLPG
SPGIVGDPGPSGTPGPQGFEGVAGKPGSLGLPGMPGRSVGVGYTLVKHSQSDQIPPCPIG
MNKLWDGYSLLYVEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWL
STTAPIPMMPVDSVQIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWRSLWIGYSFLM
HTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEQSQQFVS
APPSETLKAGQLRTRVSRCQVCMKNL
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
ggtggaaagaagtcttacagtgggccatgcgggggccgcgattgcagtgctggatgcaaa
tgttttccagagaagggtgcacggggtcgaccaggaccgattgggcttcagggaccaata
ggtgcacctggatttactggcccagaaggtttgccgggagcaaaaggtgagagaggagca
gtgggcccccctggaccagctggacagaaaggtgacaagggtccaatgggagttccagga
tttcaaggcatcaacgggatcccaggtcaccctgggcaatctggacctagaggtctgcct
ggcctcgacggctgcaatggtaccactgggagtcctggcgtttctggatcagatgggttt
cctggcctacctgggctgcctggtcatcctggcccaaaaggccttaaaggagaacctgtt
tttgctcaaggtggtcttaaaggaatgaagggagaaaatggtcttcctggattggatgga
atttctggcccaaaaggttctccaggtccaataggttctgcaggccctataggattacca
ggtttgcagggtccaatgggtccccccgggccaccaggtccaaaaggtaacatgggatta
ggctttcaaggagagaaaggagaaaagggtgatgtagggctgcctggccctccaggtccc
ccaccatccactggaatactggaattcatgggatttccaaaagggaagcaaggagaaaag
ggtgagccaggccctcaaggattccctggagacaaaggattgcctggcatgccgggcttt
ggaggtgttggagaaaaaggagaaaaaggtgtgcctggcttaccaggtggcaggggtctt
ttgggactggatggatctgatgggattcctgggagaaagggtcatccaggtattccaggc
tatccaggactggatggagtcgaaggcatgaagggtgaattaggtgacatcggtcccccg
ggccctcccatcgttattgacagggaaggtgtagtcatttcaggtgccccgggtgaccct
ggaaacccgggaatacctggtcccccaggagatgaagggatcagtggtttaccaggcctt
ccaggagctccagggtttccaggcctggagagagatggaatgggctccggagggtcacca
ggtattccaggtgtgaagggtgaagtgggagaaccaggaagagcaacgattggattacca
ggcactcctggcagagatggtttacggggcctgccaggagcaccaggattgcctggttca
ccacgcccttcattccccccagacacgatcctggatggaaggactggggccccaggggag
cctggacaaagagggttgccaggagctttgggtccaaaggggtacaaaggagaggcaggt
gattgtgcttgtgatggaggagttacaagagctggtctaaaaggcatctcaggtccacca
ggtccatcgggaagccctggtgtgcctgggattaagggcattggtggagacccaggcact
gtgggtgcaccaggactgcgaggccctccggcttcggctggtcagcaaggtcttccaggc
cttaagggagaaaaaggggactcgtcctatgcaacaggcagaggtgctcgtggggaccgt
ggtgcgacagcacccagaggaccttcaggcatcccgggaacccctggcagggatggactt
ccaggcttgccaggcccaccagggcctccaggtgatggcgggctcggtttcccaggtgaa
aaaggactgccaggattacctggctccaagggccatcgtggagaaactggttctcctggt
gttggatatccaggtcctagtggagttcgtgggccaccaggtgacccaggaatggatgga
tttccaggacaagcaggtcttccaggccctccaggtatcaccttgccctgcatagttcct
ggagcatatgggcccgcagggacttccggctttccaggattgccaggtcccaaaggcagc
aaaggctttcctggcattccaggccaacctggattacatgggtcaaaaggacagccaggg
tctccaggaataataggcttgcaaggggaacctggcttccctgggcctcgaggagagcaa
gggtcacaaggacttccaggactggatggaacagatggtttgcctgggaaaatgggtgct
tcaggcttagctggaatgaaaggagctcctggagatgtatttggtgctgagagtggagcc
ctgggagagcgtggccgacctggactcccaggtgataaagggcttacaggtgatcttgga
tttccaggaccaaaagggttagatggaagaccaggcctcctaggtattaaaggcgaacag
ggtaatccaggatattcgggtgtccctggattgcagggacctcctgggcctggaggtcct
tttggcattaagggaaaaccaggacccttggggtcagctggccttgcaggagcaccaggc
tgtcaaggacttcctggagtcaaaggcttgactggagacgtaggtccacaaggccctgct
ggtatgaaaggcttccctggtcttgatggtgctccaggatctcctggggaaagaggattc
ttagggccacctgggccttttggtcaagatggacatccaggcttctctgggccgaaaggc
gagaaagggtcttctggcctgcttggtttccctggcatgccaggcctgcctggtgttgct
ggggcgaatggatttaaaggaactcctggcacagctggaggaaaagggagccctggagtt
gtaggactccaaggccaaaaaggtgacagaggtgatgtaggtccacctggtcttcctgtt
cttgggcctccagaacaggcactgcaattcaaaggagacaaaggagatcctggattagct
ggacttggaggattccctggacctagaggtgataaaggaatcccaggaagccgtggacag
cctggtctccctggtccaattgggtcagcaagcaaagagagaggtcttcatggtgaccca
ggcttccctggtccatctggacagcctggactgccaggacagaagggtacacatggtatc
atantaatgccaggagagaggggttcggatggtatcacaggaacacttggattcccagga
cctattggccttcctggtccaaagggagagagagggagagaaggactcaagggtgaacca
ggctacccaggaaacactggggtgcatggactcaaaggcagcccaggagatcttggccaa
gaaggaccagcaggaatccctggaaatgctggactgagaggaatccctgggccaccagga
cctccagggcagccaggatctgtcggattccctggagctcgtggaacagcaggacctaaa
gggtttcatggatttccgggtttaaatggtctgaatggcttgccaggcacaaaagggtct
cctggaacaccaggtctgagtgaagctggactgaaaggccctgcaggtctcccaggtcta
aagggtgaagaaggttctccaggcttgggtagaggagctctaggattccctggaccaaaa
ggctcatcaggagacatgggtccccctggtcctgtgggactgcctggcttgccaggaaca
cctggagcttctcttccttctgatatacgtgggagacctggggatgctggctatccagga
actgatgggagttcaggtcttccaggtcctccaggaccacgaggaccccctggcccagct
tctgatcaaggtgacacaggcaacccaggtttccctggtgttcttggcttgcgaggcatt
aagggtgacgtgggacccactggtccaattggactccctggagcatctggattcaaaggt
gtaagaggggagcctggccttatggggatgccaggtaaagatggacctccgggggatcct
ggttaccctgggctgaaaggtgaaatgggccgtcgaggtctccctggccgacaaggggct
ccaggtataaccccacagccagaagaaatcacagcccctgcaggcttacctggtctgcca
ggaattgatggtgtccctggctttgatggagatcctggattccaaggcccagctggaaaa
ccaggtacaaaaggtctgccaggaagatctggtttgaaaggacatgatggtttacccggt
tcacctggcatagttggggatccaggaccttcgggtaccccaggaccacaaggatttgaa
ggtgttgctggaaagccgggctcgcttggtttgccgggaatgcctggtcggagcgtgggc
gttggatacactttagtgaagcacagtcagtcagaccaaatcccaccttgtcccatagga
atgaataagctctgggacggctacagcttactgtacgtggaggggcaggaaaagtcacac
aaccaggatcttggttttgctggctcatgtttgcctcgcttcagcaccatgccttttatt
tactgcaacatcaacgaagtgtgctactacgccagccgaaatgacaagtcctactggctc
tccaccactgctcctatccccatgatgccagtggacagtgttcagatcccacagtacatc
agtcgttgctcagtatgtgaagcaccttcccaggctgtggctgtgcacagccaggacatc
accatcccacagtgtccccttggttggcgcagcctatggataggatactccttccttatg
catactgcggctggcgcagaaggtggaggtcagtcccttgtctcacctggttcttgcctg
gaggatttccgtgccactccattcattgaatgcaacggtgctaggggaacatgccattac
tttgcaaacaaatacagcttctggctgacgaccgttgaacagtcgcagcagtttgtcagc
gctcctccctcagaaaccctgaaagcaggacagcttcgaacaagggtcagccgttgccaa
gtgtgcatgaagaacttgtag
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integrated database retrieval system
