Fulmarus glacialis (Northern fulmar): 104076446
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Entry
104076446 CDS
T08370
Symbol
COL4A6
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga04382
Cornified envelope formation
fga04510
Focal adhesion
fga04512
ECM-receptor interaction
fga04518
Integrin signaling
fga04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104076446 (COL4A6)
04518 Integrin signaling
104076446 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104076446 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104076446 (COL4A6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104076446 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fga04147
]
104076446 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
fga00536
]
104076446 (COL4A6)
Exosome [BR:
fga04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104076446 (COL4A6)
Glycosaminoglycan binding proteins [BR:
fga00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104076446 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104076446
NCBI-ProteinID:
XP_009575612
LinkDB
All DBs
Position
Unknown
AA seq
1646 aa
AA seq
DB search
GGKKSYSGPCGGRDCSAGCKCFPEKGARGRPGPIGLQGPIGAPGFTGPEGLPGAKGERGA
VGPPGPAGQKGDKGPMGVPGFQGINGIPGHPGQSGPRGLPGLDGCNGTTGSPGVSGSDGF
PGLPGLPGHPGPKGLKGEPVFAQGGLKGMKGENGLPGLDGISGPKGSPGPIGSAGPIGLP
GLQGPMGPPGPPGPKGNMGLGFQGEKGEKGDVGLPGPPGPPPSTGILEFMGFPKGKQGEK
GEPGPQGFPGDKGLPGMPGFGGVGEKGEKGVPGLPGGRGLLGLDGSDGIPGRKGHPGIPG
YPGLDGVEGMKGELGDIGPPGPPIVIDREGVVISGAPGDPGNPGIPGPPGDEGISGLPGL
PGAPGFPGLERDGMGSGGSPGIPGVKGEVGEPGRATIGLPGTPGRDGLRGLPGAPGLPGS
PRPSFPPDTILDGRTGAPGEPGQRGLPGALGPKGYKGEAGDCACDGGVTRAGLKGISGPP
GPSGSPGVPGIKGIGGDPGTVGAPGLRGPPASAGQQGLPGLKGEKGDSSYATGRGARGDR
GATAPRGPSGIPGTPGRDGLPGLPGPPGPPGDGGLGFPGEKGLPGLPGSKGHRGETGSPG
VGYPGPSGVRGPPGDPGMDGFPGQAGLPGPPGITLPCIVPGAYGPAGTSGFPGLPGPKGS
KGFPGIPGQPGLHGSKGQPGSPGIIGLQGEPGFPGPRGEQGSQGLPGLDGTDGLPGKMGA
SGLAGMKGAPGDVFGAESGALGERGRPGLPGDKGLTGDLGFPGPKGLDGRPGLLGIKGEQ
GNPGYSGVPGLQGPPGPGGPFGIKGKPGPLGSAGLAGAPGCQGLPGVKGLTGDVGPQGPA
GMKGFPGLDGAPGSPGERGFLGPPGPFGQDGHPGFSGPKGEKGSSGLLGFPGMPGLPGVA
GANGFKGTPGTAGGKGSPGVVGLQGQKGDRGDVGPPGLPVLGPPEQALQFKGDKGDPGLA
GLGGFPGPRGDKGIPGSRGQPGLPGPIGSASKERGLHGDPGFPGPSGQPGLPGQKGTHGI
IXMPGERGSDGITGTLGFPGPIGLPGPKGERGREGLKGEPGYPGNTGVHGLKGSPGDLGQ
EGPAGIPGNAGLRGIPGPPGPPGQPGSVGFPGARGTAGPKGFHGFPGLNGLNGLPGTKGS
PGTPGLSEAGLKGPAGLPGLKGEEGSPGLGRGALGFPGPKGSSGDMGPPGPVGLPGLPGT
PGASLPSDIRGRPGDAGYPGTDGSSGLPGPPGPRGPPGPASDQGDTGNPGFPGVLGLRGI
KGDVGPTGPIGLPGASGFKGVRGEPGLMGMPGKDGPPGDPGYPGLKGEMGRRGLPGRQGA
PGITPQPEEITAPAGLPGLPGIDGVPGFDGDPGFQGPAGKPGTKGLPGRSGLKGHDGLPG
SPGIVGDPGPSGTPGPQGFEGVAGKPGSLGLPGMPGRSVGVGYTLVKHSQSDQIPPCPIG
MNKLWDGYSLLYVEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWL
STTAPIPMMPVDSVQIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWRSLWIGYSFLM
HTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEQSQQFVS
APPSETLKAGQLRTRVSRCQVCMKNL
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
ggtggaaagaagtcttacagtgggccatgcgggggccgcgattgcagtgctggatgcaaa
tgttttccagagaagggtgcacggggtcgaccaggaccgattgggcttcagggaccaata
ggtgcacctggatttactggcccagaaggtttgccgggagcaaaaggtgagagaggagca
gtgggcccccctggaccagctggacagaaaggtgacaagggtccaatgggagttccagga
tttcaaggcatcaacgggatcccaggtcaccctgggcaatctggacctagaggtctgcct
ggcctcgacggctgcaatggtaccactgggagtcctggcgtttctggatcagatgggttt
cctggcctacctgggctgcctggtcatcctggcccaaaaggccttaaaggagaacctgtt
tttgctcaaggtggtcttaaaggaatgaagggagaaaatggtcttcctggattggatgga
atttctggcccaaaaggttctccaggtccaataggttctgcaggccctataggattacca
ggtttgcagggtccaatgggtccccccgggccaccaggtccaaaaggtaacatgggatta
ggctttcaaggagagaaaggagaaaagggtgatgtagggctgcctggccctccaggtccc
ccaccatccactggaatactggaattcatgggatttccaaaagggaagcaaggagaaaag
ggtgagccaggccctcaaggattccctggagacaaaggattgcctggcatgccgggcttt
ggaggtgttggagaaaaaggagaaaaaggtgtgcctggcttaccaggtggcaggggtctt
ttgggactggatggatctgatgggattcctgggagaaagggtcatccaggtattccaggc
tatccaggactggatggagtcgaaggcatgaagggtgaattaggtgacatcggtcccccg
ggccctcccatcgttattgacagggaaggtgtagtcatttcaggtgccccgggtgaccct
ggaaacccgggaatacctggtcccccaggagatgaagggatcagtggtttaccaggcctt
ccaggagctccagggtttccaggcctggagagagatggaatgggctccggagggtcacca
ggtattccaggtgtgaagggtgaagtgggagaaccaggaagagcaacgattggattacca
ggcactcctggcagagatggtttacggggcctgccaggagcaccaggattgcctggttca
ccacgcccttcattccccccagacacgatcctggatggaaggactggggccccaggggag
cctggacaaagagggttgccaggagctttgggtccaaaggggtacaaaggagaggcaggt
gattgtgcttgtgatggaggagttacaagagctggtctaaaaggcatctcaggtccacca
ggtccatcgggaagccctggtgtgcctgggattaagggcattggtggagacccaggcact
gtgggtgcaccaggactgcgaggccctccggcttcggctggtcagcaaggtcttccaggc
cttaagggagaaaaaggggactcgtcctatgcaacaggcagaggtgctcgtggggaccgt
ggtgcgacagcacccagaggaccttcaggcatcccgggaacccctggcagggatggactt
ccaggcttgccaggcccaccagggcctccaggtgatggcgggctcggtttcccaggtgaa
aaaggactgccaggattacctggctccaagggccatcgtggagaaactggttctcctggt
gttggatatccaggtcctagtggagttcgtgggccaccaggtgacccaggaatggatgga
tttccaggacaagcaggtcttccaggccctccaggtatcaccttgccctgcatagttcct
ggagcatatgggcccgcagggacttccggctttccaggattgccaggtcccaaaggcagc
aaaggctttcctggcattccaggccaacctggattacatgggtcaaaaggacagccaggg
tctccaggaataataggcttgcaaggggaacctggcttccctgggcctcgaggagagcaa
gggtcacaaggacttccaggactggatggaacagatggtttgcctgggaaaatgggtgct
tcaggcttagctggaatgaaaggagctcctggagatgtatttggtgctgagagtggagcc
ctgggagagcgtggccgacctggactcccaggtgataaagggcttacaggtgatcttgga
tttccaggaccaaaagggttagatggaagaccaggcctcctaggtattaaaggcgaacag
ggtaatccaggatattcgggtgtccctggattgcagggacctcctgggcctggaggtcct
tttggcattaagggaaaaccaggacccttggggtcagctggccttgcaggagcaccaggc
tgtcaaggacttcctggagtcaaaggcttgactggagacgtaggtccacaaggccctgct
ggtatgaaaggcttccctggtcttgatggtgctccaggatctcctggggaaagaggattc
ttagggccacctgggccttttggtcaagatggacatccaggcttctctgggccgaaaggc
gagaaagggtcttctggcctgcttggtttccctggcatgccaggcctgcctggtgttgct
ggggcgaatggatttaaaggaactcctggcacagctggaggaaaagggagccctggagtt
gtaggactccaaggccaaaaaggtgacagaggtgatgtaggtccacctggtcttcctgtt
cttgggcctccagaacaggcactgcaattcaaaggagacaaaggagatcctggattagct
ggacttggaggattccctggacctagaggtgataaaggaatcccaggaagccgtggacag
cctggtctccctggtccaattgggtcagcaagcaaagagagaggtcttcatggtgaccca
ggcttccctggtccatctggacagcctggactgccaggacagaagggtacacatggtatc
atantaatgccaggagagaggggttcggatggtatcacaggaacacttggattcccagga
cctattggccttcctggtccaaagggagagagagggagagaaggactcaagggtgaacca
ggctacccaggaaacactggggtgcatggactcaaaggcagcccaggagatcttggccaa
gaaggaccagcaggaatccctggaaatgctggactgagaggaatccctgggccaccagga
cctccagggcagccaggatctgtcggattccctggagctcgtggaacagcaggacctaaa
gggtttcatggatttccgggtttaaatggtctgaatggcttgccaggcacaaaagggtct
cctggaacaccaggtctgagtgaagctggactgaaaggccctgcaggtctcccaggtcta
aagggtgaagaaggttctccaggcttgggtagaggagctctaggattccctggaccaaaa
ggctcatcaggagacatgggtccccctggtcctgtgggactgcctggcttgccaggaaca
cctggagcttctcttccttctgatatacgtgggagacctggggatgctggctatccagga
actgatgggagttcaggtcttccaggtcctccaggaccacgaggaccccctggcccagct
tctgatcaaggtgacacaggcaacccaggtttccctggtgttcttggcttgcgaggcatt
aagggtgacgtgggacccactggtccaattggactccctggagcatctggattcaaaggt
gtaagaggggagcctggccttatggggatgccaggtaaagatggacctccgggggatcct
ggttaccctgggctgaaaggtgaaatgggccgtcgaggtctccctggccgacaaggggct
ccaggtataaccccacagccagaagaaatcacagcccctgcaggcttacctggtctgcca
ggaattgatggtgtccctggctttgatggagatcctggattccaaggcccagctggaaaa
ccaggtacaaaaggtctgccaggaagatctggtttgaaaggacatgatggtttacccggt
tcacctggcatagttggggatccaggaccttcgggtaccccaggaccacaaggatttgaa
ggtgttgctggaaagccgggctcgcttggtttgccgggaatgcctggtcggagcgtgggc
gttggatacactttagtgaagcacagtcagtcagaccaaatcccaccttgtcccatagga
atgaataagctctgggacggctacagcttactgtacgtggaggggcaggaaaagtcacac
aaccaggatcttggttttgctggctcatgtttgcctcgcttcagcaccatgccttttatt
tactgcaacatcaacgaagtgtgctactacgccagccgaaatgacaagtcctactggctc
tccaccactgctcctatccccatgatgccagtggacagtgttcagatcccacagtacatc
agtcgttgctcagtatgtgaagcaccttcccaggctgtggctgtgcacagccaggacatc
accatcccacagtgtccccttggttggcgcagcctatggataggatactccttccttatg
catactgcggctggcgcagaaggtggaggtcagtcccttgtctcacctggttcttgcctg
gaggatttccgtgccactccattcattgaatgcaacggtgctaggggaacatgccattac
tttgcaaacaaatacagcttctggctgacgaccgttgaacagtcgcagcagtttgtcagc
gctcctccctcagaaaccctgaaagcaggacagcttcgaacaagggtcagccgttgccaa
gtgtgcatgaagaacttgtag
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integrated database retrieval system
