Fulmarus glacialis (Northern fulmar): 104077454
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Entry
104077454 CDS
T08370
Symbol
CCDC88A
Name
(RefSeq) girdin
KO
K25392
girdin
Organism
fga
Fulmarus glacialis (Northern fulmar)
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
fga03037
]
104077454 (CCDC88A)
Cilium and associated proteins [BR:
fga03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104077454 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
APG6_N
GAS
Motif
Other DBs
NCBI-GeneID:
104077454
NCBI-ProteinID:
XP_009576999
LinkDB
All DBs
Position
Unknown
AA seq
1884 aa
AA seq
DB search
MENEIFTPLLEQFMSSPLVTWVKTFGPLAGGNGTNLEEYVALVDGVFLNEVMLQINPKSA
NQRINKKVNNDASLRIQNLSILVKQIKTYYQENLQQLIMMSLPNVLIIGKNPFSEPGTEE
IKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTRAAVAAHIQEVTHNQENVFDLQWMDVIV
LTQEYVEPLLKNMALHLKRLIDERDEHSETIIELSEERDCLRFLPHASAAQSPCGSPGMK
RTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEAELKRLQQENMNLLSD
ARSARVYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETKT
MLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQ
SMDESLHLGWELEQINRTTELSEVPQKSLGHEVNELTSSRLLKLEMENQSLLKTVEELQS
AVGSVEGSSSRILKMEKENQRLSKKLEELENEISQEKQSLQNSQNLSKDLMKEKAQLEKT
LEALRENSERQIKLLEQETEHLNQTVASLRQRSQISAEARMKEIEKENKILHESIKETSS
KLNKIEFEKKQVRKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEAL
EQENSDLEMENRKLKKTLDSLKNLTFQLESLEKENSQLDEENLELRRTIESLKCTSIKVA
QLQLENKELESEKEQLKKSLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQQ
LESELQDLESENQTLQKNLEELKISSKRLEQLEKENKLLEQETSQLEKDKKQLEKENKRL
RQQAEIKDSTLEENNVKISNLEKENKSLFKEIVVYKESCVRLKELEKENKELVKRATIDK
KTLVTLREDLVNEKLKTQQMNNDLEKLAHELEKIGLNKERLLHDEQSSDDRYKLLESKLE
STLKKSLEIKEEKIAALEARLEESTNLNQQLRQELKTVKKNYEALKQRQEEERMVQNSPP
RSGEDNQSVNKWEKENQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNSN
LQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSALENE
NECVLKEREDLKSLYDSLLKDHEKLEHLHERQASEYESLIAKHGSLKSAHKNLEVEHKDL
EDRYNQLLKQKVQLEELEKVLKVEQEKMLQQNEKHETVAAEYKKLRDENERLTHTYSQLL
RENEVLQTDHKNLKTLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKG
NLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIM
DQYKFYEPSPPRRRGNWITLKMRKLIKSKKDVNRERLKSVTLTPTRSESSEGFLQLPHQD
SQDSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKEKDKMKAFYRRSMSMNDLVQS
MVLAGGQWTGSSEHLEGPDDISTGKRRKELGAMAFSTTAINFATVNSSTGFRSKQLLNNK
DTTSFEDVSPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVNSQSR
PQSHSSGEFSLLHEHEAWSSSSSSPIQYLKGHTRSSPVLQQRTPEILDSRGKQIKTGSPG
SEVVTLQQFLEESNKSTSSEMKSASEENLLDEVMKSLSESAELTGREKLRKQSSAGCGIV
RSLSVKHTVDFSDGRSIKPEQLVRPSLRKTEDTYFTSSPIKFTSGTQGKAKSVKEKIQAT
VSQRQSRDCNPYATLPRASSVISTAEGTTRRTSIHDFLSKDSRQPVSVDPAPSTTDRSVP
STSNVEAIPESRNSKSRSREQQSS
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaaatattcacaccccttttggagcagttcatgtctagccctcttgtcacc
tgggttaagacatttggaccgttagctggaggaaatgggaccaacctggaagaatatgtg
gcgctagtggacggcgtgtttctgaacgaagtcatgctgcaaattaatccaaaatctgct
aatcagaggataaacaaaaaagtaaacaatgatgcatcattaaggattcaaaatttgtct
attttggtgaaacaaataaaaacttactatcaggagaatttgcagcagttgatcatgatg
tctttgccaaatgtattaataattggcaaaaatcctttttctgagccaggtactgaagaa
ataaaaaaactcctcctgcttttacttggttgtgcagttcagtgtcagaaaaaagaagaa
tttattgaaagaatccaaggtctggattttgacactagagcagctgttgcagcccatatt
caagaggtaactcataatcaggaaaatgtgtttgatctgcagtggatggatgtcattgta
ttgacacaagaatatgttgaacctctcttgaaaaatatggcattacatttaaaaagactt
atagatgaaagagatgagcactcagagactatcatagaactctcggaagaacgggattgt
ctccgttttctacctcatgcatcggcagcacaatcaccttgtggatctcctggcatgaaa
cgcactgaaagcagacagcacctgtcagtagagctagcagatgccaaagcaaagataaga
aggcttaggcaagagcttgaggaaaagactgagcagttgcttgactgtaaacaagaactt
gaacagatggaagctgaactaaagagacttcagcaagagaatatgaatttactctcagat
gcccgttctgccagagtgtatagagatgaattagatgctcttcgtgagaaggcaattcga
gttgacaagcttgaaagtgaagtcagccggtataaagagaggctgcatgatattgaattc
tacaaagctagagtggaggagttaaaggaagacaatcaagtgttgctagaaacaaagaca
atgttggaagatcaattagaggggacccgagcccgttctgataaattacatgagttagaa
aaagagaatctacaattaaaagctaaattacatgatatggagatggagcgtgatatggac
agaaagaagattgaggaactcatggaggaaaatatgactctagaaatggctcagaaacaa
agtatggatgaatcattgcatcttggctgggaacttgaacagataaataggactactgaa
ctttctgaagtgccacagaaatcacttggtcatgaagtaaatgaactgacatcaagcagg
ttactgaagttggaaatggaaaaccaaagtttgctgaagacagtggaagaactacaaagt
gcagtgggttctgtagaaggcagtagttcaaggattctgaaaatggaaaaagaaaaccaa
agacttagcaaaaagcttgaagagctagagaatgaaattagccaagagaaacaaagtctt
cagaacagtcaaaatttgagtaaagatttgatgaaagaaaaagcacagcttgaaaagaca
cttgaagcacttcgagaaaattcagagcgacaaattaagctattagaacaagaaactgaa
catttgaatcaaaccgtagcttctctgagacaacggtcacaaatcagtgctgaagcgaga
atgaaagaaattgaaaaagaaaataaaatccttcatgaatctattaaagagaccagcagt
aagttaaataagattgaatttgaaaaaaagcaagtcaggaaagaactggagcactataaa
gagaaaggggagagagcagaagaactcgagaatgagctgcatcatctggagaaggagaac
gaattattacagaaaaaaattactaacctaaaaattacttgtgagaagatcgaggcctta
gaacaagaaaactcagacctggaaatggaaaacagaaaactcaaaaaaactttggatagc
ctaaaaaatctcacttttcaattagaatccttagaaaaggagaattcacaacttgatgaa
gaaaatttggaattaagaagaacaattgaatccttgaagtgtacaagcattaaagtggcg
caattacagttagaaaataaggaactggagagtgaaaaggagcaacttaaaaaaagcctt
gaactcatgaaagcctcgtttaagaagactgaacgcttggaagtcagctaccaaggccta
gacacagaaaaccaaagactacagaaagcccttgaaaacagcaataagaagattcagcaa
ttagaaagtgaattacaagatttagagtctgaaaatcagactctgcaaaagaacttagaa
gagttaaaaatctctagtaagcgcctagagcaattggaaaaggagaataagttgttagaa
caagagacttctcagctggaaaaagataagaaacagctagaaaaagaaaataaaagactt
cgacaacaagcggaaattaaagatagtactttagaagaaaacaatgtaaaaattagtaat
ctggaaaaggaaaataaatccctgtttaaagaaatagttgtatataaagagtcatgtgta
cgcctgaaagaactagaaaaagaaaataaagaactcgtgaaaagagctaccattgataag
aaaacccttgtcactttacgagaggacttggtgaatgaaaaattgaagactcaacaaatg
aacaatgatctagaaaaacttgcccacgaacttgaaaaaataggcttaaacaaggagcgg
ctcttgcatgatgaacagagcagtgatgacaggtacaagcttttggagtcaaaattagaa
tccacacttaagaagtctctcgaaataaaagaagaaaaaattgctgctttggaggctcgt
ttagaagaatcaacaaatttaaatcagcaactccgtcaggaacttaaaacagtgaaaaag
aactatgaagctctcaagcaaagacaagaagaagaaaggatggttcagaattctcctcca
agaagtggagaagacaatcaatctgtcaataagtgggagaaggaaaatcaggaaaccact
agagaattattgaaagttaaagacagattaatcgaagtggaaaggaataatgctacactg
caggcagagaagcaagcactgaagacacaattaaagcaacttgagacgcagaatagcaat
ctgcaggctcagattcttgcacttcagagacagactgtttctctacaggaacaaaataca
actctacaaactcaaaatgccaagctgcaggttgaaaattccacccttaattctcaaagc
acatcgcttatgaatcagaatgcacaacttttgatccagcagtctgctttagaaaatgaa
aatgaatgtgtgctcaaggaacgtgaggatctgaaatcattgtatgattcacttctcaaa
gatcatgaaaagctggaacacctgcatgaacgccaagcttccgagtatgaatctctgatt
gctaaacatggaagtcttaaatctgcacacaaaaatctggaggtggagcataaggactta
gaagataggtacaatcaattgctgaaacagaaggtgcagctggaagaattggagaaagta
ctcaaggtagaacaggagaaaatgctgcagcaaaatgaaaaacatgaaactgtagcagca
gagtataaaaaacttcgtgatgaaaatgaaaggcttactcatacatacagtcagctcttg
agagagaatgaagttctccaaaccgatcataagaatttgaaaacattattgaacaattcc
aaactagagcaaacacgattagaagctgagttttctaaactcaaagaacagtatcaacaa
ctggatattacatcgacaaaactaaataatcaatgtgagctgcttagccagcttaaagga
aatctggaggaggaaaacagacatctactagatcaaattcagacattaatgctacagaat
agaacattacttgagcagaatatggaaagcaaggatctcttccatgtagagcaaaggcag
tacattgacaagctaaatgaattaaggcgacagaaggagaaattggaggagaagataatg
gatcagtataaattttatgaaccgtctccaccaagaagaaggggcaactggattactctg
aaaatgaggaagctgataaaatctaagaaggatgttaatcgagaacgtttgaagtccgtg
acccttacgcctacccgttcagaatccagtgaaggatttcttcagctgccccaccaggac
agtcaggatagttcctctgtgggctcgaactctcttgaagatggccagaccttggggacc
aaaaagagtagtatggttgcactgaaaagactgccctttttgaggaacagaccgaaggaa
aaagacaaaatgaaggccttctaccgtcgctccatgtccatgaatgacctggtgcagtcc
atggtcctagcaggaggacaatggacaggtagttctgagcatctggagggtcctgatgat
atatctacgggtaaaaggaggaaagaattgggagctatggccttctctactacagctatc
aactttgcaactgtcaactcttctacaggcttcagatccaagcagttgctaaataacaaa
gatactacatcctttgaagacgtaagtccacaaggtattagtgatgattctagtacagga
tcaagagttcatgcttccagaccagccagccttgatagtggcagaacatccactagcaat
agcaataacaatgcttcactccatgaagtcaaagcaggtgcagttaacagtcaaagcagg
ccgcaaagtcacagcagcggagaatttagcctgctacatgaacatgaggcttggtctagc
agcagcagcagtcccattcagtatctgaaaggtcatacaaggtctagtcctgtgctccag
caaagaacgcctgaaatactggatagtcgtggaaaacagatcaaaaccggttctcctgga
agtgaagttgttaccctgcaacagttcttagaagaaagcaacaagagtacctcaagtgag
atgaaatctgcaagtgaagagaatcttttagatgaagtcatgaaaagcttatctgagtct
gcggagctgacaggaagggagaagctaagaaaacagtcgtctgctggttgtggtattgtg
agatcattaagtgtaaaacatacagttgatttctcagatggacgatccattaaaccagaa
cagctggtaaggcccagccttcgtaaaactgaagatacctactttactagctctccaata
aaatttacatcaggcactcaagggaaggccaaatcagttaaagaaaagatacaagcaact
gtatcacagcgacaatcaagagattgcaatccttacgctaccttacctcgtgcaagcagc
gtgatttccacggcagaaggaactactcgaaggacaagcattcacgattttttatctaag
gacagtaggcaacctgtatcagttgatccagcaccatccaccactgacagaagtgttcca
tcaacctctaatgtggaagctatcccagaaagcagaaattcaaaaagcaggtctagggag
caacaaagctcctaa
DBGET
integrated database retrieval system