Fulmarus glacialis (Northern fulmar): 104078342
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Entry
104078342 CDS
T08370
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03410
Base excision repair
fga04140
Autophagy - animal
fga04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104078342 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104078342 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
104078342 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fga03036
]
104078342 (HMGB1)
03400 DNA repair and recombination proteins [BR:
fga03400
]
104078342 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fga04147
]
104078342 (HMGB1)
Chromosome and associated proteins [BR:
fga03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
104078342 (HMGB1)
DNA repair and recombination proteins [BR:
fga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
104078342 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
104078342 (HMGB1)
Exosome [BR:
fga04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104078342 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
RNA_pol_3_Rpc31
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
104078342
NCBI-ProteinID:
XP_009578245
UniProt:
A0A093I3K5
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKF
EDMAKADKLRYEKEMKNYVPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKVDAGKKVVAKAEK
SKKKKEEEEDEDEDEEDEDDEEEEEEEDEDDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagggcgatcctaagaagccgagaggtaaaatgtcttcatatgccttctttgtg
caaacctgccgggaggagcacaagaagaaacatccagatgcttcagtgaacttttcagag
ttctcaaaaaaatgctcagaacgatggaagactatgtcttctaaggagaaagggaagttt
gaagatatggcaaaggctgacaagcttcgttatgaaaaagaaatgaaaaactatgtacca
cctaagggggaaacaaaaaagaagttcaaggatccaaatgcaccgaagaggcctccttcg
gcttttttcttgttttgctccgagtttcgtccaaaaatcaaaggggaacatcctggtctg
tccattggggatgtcgccaagaaactgggggagatgtggaacaacactgctgcagatgat
aaacagccttatgaaaaaaaggctgctaagctgaaggagaagtatgaaaaggatattgct
gcataccgggccaaagggaaggttgatgcaggcaaaaaagtagttgccaaggctgagaag
agcaagaagaagaaggaggaggaggaagatgaggatgaagatgaagaggatgaagatgat
gaagaagaggaagaggaggaggatgaagatgatgatgatgatgaataa
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integrated database retrieval system