Fulmarus glacialis (Northern fulmar): 104078411
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Entry
104078411 CDS
T08370
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 13D-like
KO
K19527
vacuolar protein sorting-associated protein 13D
Organism
fga
Fulmarus glacialis (Northern fulmar)
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fga04131
]
104078411
Membrane trafficking [BR:
fga04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
104078411
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
Motif
Other DBs
NCBI-GeneID:
104078411
NCBI-ProteinID:
XP_009578341
LinkDB
All DBs
Position
Unknown
AA seq
2389 aa
AA seq
DB search
MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKDALKELELPFEVKAGF
IGKITLQIPFYRPHVDPWVISVSKLHLIGAPEKKEDFDEEREKLQEREYKKALLLALEEK
WKKERQQKGESYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPLQPFAFGICIKNVS
MQNAVFEPVEKLMRKKQLDVADFSVYWDTHCTLLGDLPPGQLQEAMDKSMESRDHNYIME
PVCTSALLKRNCSKEPLRSRQTPRLECDIQLETIPLKLSQMQYQQIMGFLKELARKERQL
KFRKWRPKVTVTENCREWWIFALNANLSEIKEQRQRSTWEFALHRAQDAVSYTDMYYSKL
KGEPLSTAEQAEMHRIEDEQTYEELKILYEIVHDKFHDLAESVKEPLPDSPGGSPTAETA
HGSSTGMLQYLQSWFPGWGGWYGYTQQTYEGEPFEGLLPDPKEQWNPEDILGADEFFDPA
ADASSMNTFTKRDHVFAKLNLQLQGGSFTLLHKEKKMVHAEETAFIQLEFSGVKILAESL
PRRNSSLLKVQLGGLFLRDLATEGTIFPVLVFPNPQKEVGCMSSFGLQSLSSEMTNQNTV
ADPDAPVFEMLYERNPIHSNFERRLEVSTRPLNIIYNPQAIKKVADFFYKGRVHTSGFGY
QSELEARVAEAARRQYNKLKMQTKAEIRQTIDRLLVGDFIENSKSWTVCLDISAPQVIFP
DDFKFVDPVLVVVDLGRILLTNSQEESKRSADTFSSEVNELSDEEYKTPLATPPNTPPPE
SNTNSVIKMSEFTGVEISEEQLQAHLMSKKMYERYTLSFMDLQIMVGRVKDNWKHVQDSD
VGPTHVVEKFNVHLQLERRLIYTSDPKYPGAVLSGSLPDLKIHINEDKILALKNCCTQLS
TSETKSSDALHLGKXXXXXXXXXXAEVDQLGSLHDSVMNLTQSVVMLEQHTREVLVESQL
LLAEFKVNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTVHGLLLVDTMQTYGT
DFDLLMASHKNLSFDVPTGSLRDSRAQSPVYGPYDARPIDVASLAERCTTASNTSSGNNG
KDQESLIKLEYQFVSAECPSMNLDSSLQVISVQVNNLDIILNPETIVELIGFLQKSFPKE
KEDSSPQPLLTDLERDWREQETFQSTYVQNTEVAVDIHWLNILLLRTVGMTNGEKYGRKI
ATASIGGTKVNVSMCSKLDVNGSLGCLHLMDLTQDSVKNQYVVSIGNTGRYENLIGDVDY
FESLLFRLDDGNSLPDALSFTFTEKSKEECSLNLKMASLHYNHSAKFLKELTLSMDELEE
NFRSMLKSAASKVTTVLATKTAEYSEMVSLFDTTPRSRDVANVEDNEGYAFGSQPLKTDT
IKLILNVNIESPIVSIPRKPGSSELLVGHLGQISIQNFVPGEDESTSDRLQVEIKDIKMY
SLNSSQFTSKKEPASEMSHGLHCSSGPASINSQEESHFTRHDFFESLHKGHAFHILNNTT
IQFKLEKIPLERDLDLTFPLSNEDFGISSIMKIEGKFVNPLQVVFAKHVYEQVLQTLDNL
IYSEDLNKFPTSSVSSTCHSSPSASLHSTGTEFSSERKENGLFSHSSFNSVPNKSLAVRE
TKSFTQIQANFHISELQVQLSGDLTLGAQGLVSLKFQDFDVEFAKDHPQTLSIQIALRSL
LMEDLLEKNPDSMYKNLMVSRGAPKPSSLAHKEYLSQSCPSVSNVEYPDMPRSLPSHMEE
APNVFQLYQRPVCASRKKQKEDADSEYPLTPPPSPTTDRSKLPCGKSNFDDSLVHINIFL
VDRKHPEFSSHCNKINRSVDVDFNCLDVLITLQTWVVILDFFGIGSTADNHAMKLQPEDT
QQTIKSEINTLSASQAQEPVNTKLDLKVHSLSLVLNKTTSELAKASVSKLAAHLEVIEGD
LALQGSIGSLSLSDLTAHGEFYRERFTTSGEEALIFQVYKYGRPDPLLQRECDIRVTLRM
ASVQYVHTQRFQAEVVSFIQHFTQLQDVLGRQRAAIEGQTVRDKAQRASRVLLDIEAGAP
VLLIPESSKSNSLIVANLGKLKVKNRFLFAGMPGTFSLKNKDSVQFSSPLGTPKHSMKKT
TSADESKVVSEGLFMKKSSGANISRLKSEPMLNTLSKQQGQQPKLPIAPNPDSPEDHICL
LDCIVVDLQDMDIFAAERYQREYSKAVEGTSADLSFPSYFVRQTGGSLLTEPFRLKLQVE
RNLDKELSHAVADISIHGNLSSVHCSLDLNKYKLIRGLLENNLGEPIEEFMRPYDLQDPR
IHTVLSGEVYTSMSFLIDMVNVSLELMDPKGKDGCSSLARFDFKKSKLLFESSSNGTKSV
NLVSHSMMAFDTRYAGQKSTAGTLNVFSCIFQSSKNTSSPGAIQIELHF
NT seq
7169 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaggcttggtagcctgggtcctcaacacctatttgggcaaatatgtcaataac
ctgaacacagaccaactttcagttgctcttctaaagggtgctgttgaattggaaaacttg
ccattaaagaaagatgccttgaaggaactggaattaccatttgaagtaaaggcaggtttc
attggcaaaataacactacagatacctttttatcgcccacatgtggatccatgggtgata
tctgtctcaaagctgcacttaattggtgcaccggaaaaaaaagaagattttgatgaggaa
agggagaagttgcaagaacgagaatacaagaaagcccttcttctagcacttgaagaaaaa
tggaagaaagaacgacaacagaaaggggaatcttactggtactcagttactgcatctgta
gtcacaagaattgtagaaaacattgaattgaaaattcaggatgtgcatttgaggtttgaa
gatggtgtcacaaatcctttgcagccatttgcgtttggcatatgcatcaaaaatgtatca
atgcaaaatgcggtatttgaaccagtagagaagctgatgcggaaaaaacagttggatgtt
gccgacttcagtgtttattgggatacccactgcactttattgggtgacctgcctcctggt
cagctacaggaagcaatggataaaagtatggaaagtcgtgatcataattacatcatggaa
cctgtatgcacttctgctcttcttaagcgaaattgttctaaggagcctttaagatcacgc
cagactccccggcttgagtgtgacattcagcttgagactatacccttgaagctttcacag
atgcagtatcagcagatcatgggatttttaaaggaactggctaggaaggaacgacagctt
aaattcaggaagtggagaccaaaggttacagtaacagagaactgccgagaatggtggatc
tttgctttgaatgctaatctttcggagataaaggagcagagacaacgttctacctgggag
tttgcattacaccgggcccaagatgcagtatcttacactgacatgtattatagcaagttg
aagggggaaccactgtctactgcagagcaggcagaaatgcatcgtattgaggatgagcaa
acttatgaagagttgaagatactatatgagatagttcatgataaatttcatgacctagct
gagagtgttaaagagccattgcctgattccccgggaggttcccctacagcagaaacggca
catggcagtagcactgggatgctgcagtatcttcagtcttggtttcctggttggggaggc
tggtatggatatactcagcaaacatacgaaggtgaaccttttgaagggctgctgccagac
ccaaaggaacagtggaatccagaagacatattaggtgcagatgaattttttgatcctgct
gcagatgcttctagcatgaatacctttacaaagagagatcatgtttttgctaaattaaat
ctacagttgcagggtggctctttcactctgttgcataaggagaagaagatggtgcatgct
gaggaaactgcttttatacagctggagttttcaggtgtaaagatcttagcagaatccctt
cctcgcagaaattcttcccttctcaaagttcagcttggtggtctttttctgagggatttg
gcaacagaagggaccatatttcctgttcttgttttcccgaatcctcaaaaagaggttggc
tgcatgtcttcctttggactccaaagtttgtcctcagaaatgactaatcagaacactgtt
gcagatcctgatgccccagtgtttgagatgctttatgaaagaaatccaatccatagcaat
tttgagaggcgcctggaagtcagtaccagacctctaaatattatttacaatccacaagcc
attaagaaagtagctgacttcttctacaagggaagggttcatacttcaggttttggatat
cagtctgagttagaggcaagagtggctgaagctgcaagaagacagtacaacaagctgaaa
atgcagacaaaagctgaaatcaggcaaactattgatcgtttgctagtaggagacttcatt
gaaaacagcaaaagctggaccgtgtgccttgatatttctgcccctcaggtgatctttcct
gatgatttcaaatttgtggatccagtgttagttgttgtagatctgggaagaatattactt
accaattctcaagaagaatctaaaaggagtgcagatactttttcttcagaagtcaatgaa
ttgagtgatgaggaatataaaacacctcttgcaactcctcccaatactccaccaccagaa
tctaacactaatagtgtcatcaaaatgtctgaatttactggagtagaaataagtgaagag
cagctacaagcacacttaatgagtaaaaaaatgtatgagagatacacgctttcatttatg
gaccttcagatcatggtgggccgagtgaaagacaactggaaacacgttcaagatagtgat
gtgggtccaactcatgtggtagaaaaattcaatgttcacctgcaattggagcgcagattg
atatacacgtctgacccaaaatacccgggagctgtcttgtctggcagtttgccagacttg
aaaattcacatcaatgaagacaaaatattggctctgaagaactgttgtacacagctgagt
acatctgaaactaagtcttctgatgccctacatttagggaaannnnnnnnnnnnnnnnnn
nnnnnnnnnnnngcagaggtggaccagcttggcagtttgcatgattctgtaatgaatcta
acacagagtgttgtaatgctagagcaacataccagggaagttcttgttgaatctcagctg
cttttggctgaattcaaagtaaactgtatgcagctgggtgttgaaagtaatggacgatat
atctctgtactcaaggtttttggcaccaatgcccattttgtgaaaaggccatatgatgca
gaagtgtccctgactgttcatggcctgttactggttgatactatgcaaacatatggaaca
gattttgatcttttgatggcttctcataagaatctgagttttgatgtgccaacaggaagt
cttcgagacagcagggctcagtccccagtttatggaccatatgatgcacgtcccattgat
gtagctagtttggcagagagatgcactacagcctcaaatacttcatctggtaacaatgga
aaagatcaagagtctctgataaaattagagtatcagtttgtgagtgcagaatgcccatcg
atgaatttggatagcagtctgcaggtgatctctgtacaggtgaacaacctggatatcatc
cttaatccagagactattgttgaactgattgggtttctccagaaatccttcccgaaggag
aaagaagattctagtcctcagcctttactaactgacttggaaagagattggagggaacag
gaaaccttccagtctacttatgtacagaatacagaggtagcagttgatattcattggtta
aatatacttctcctcaggacagttggcatgacaaatggagaaaaatacggcagaaaaatt
gcaacagccagtattggtggcaccaaagtcaatgtctccatgtgcagtaaacttgatgta
aatggctctcttggatgccttcaccttatggacctaacacaagatagtgttaagaaccag
tatgttgtcagcatagggaatacaggaaggtatgaaaatctcattggtgatgtagattac
tttgaatctttattgtttaggcttgatgatggaaatagccttccagatgccttaagtttc
actttcacagaaaagtcaaaagaggagtgttctctcaaccttaaaatggcctccttacac
tacaaccactcagctaaatttttgaaagaactaactttgtcaatggatgaattggaagag
aatttccgcagcatgctgaaaagtgcagcttcaaaagttactacagtcttggcaactaaa
actgctgaatacagtgaaatggtttctttgtttgatacgacaccacgatcaagagatgtt
gccaacgtagaagataatgaaggctatgcatttggatcacaacctctcaaaactgatact
attaagcttatattaaatgtaaacattgagtcaccgattgtctcaatacctcgaaagcct
ggtagttctgaactgcttgtaggtcatctaggacaaatatctattcagaattttgtacca
ggagaagatgaatctacaagtgatagactgcaagttgaaattaaagatattaaaatgtat
tctttaaatagcagtcaatttacgagcaagaaggagcctgcaagtgaaatgtctcatggg
ctgcattgttcttcaggtcctgccagtattaatagccaggaagaatcccattttactcgt
catgacttctttgaatcgttacataagggccatgctttccacattctgaataacaccacc
atccagtttaaattggaaaagataccactagagagagatttggatttaacttttcctctg
agtaatgaagactttggaatatcaagcattatgaagattgaagggaaatttgtgaaccct
cttcaggtggtgtttgcaaaacacgtgtatgaacaagtcctgcagactctggataattta
atttacagtgaagacttgaacaaatttccaaccagttctgtatcttcaacttgtcatagt
tctccttcagcatcacttcatagtacaggcacagaattctcaagtgaacggaaggaaaat
ggcttattcagccattctagttttaattctgttccaaacaagtcattagctgtcagggaa
acaaagtcttttactcagattcaagcaaacttccatatctcagagctccaggttcagtta
agtggtgatcttacacttggtgcacaaggccttgtcagccttaagtttcaggattttgat
gttgagtttgctaaagatcatcctcagactttgtctattcagattgccttgcgttctctg
ctaatggaagatcttctggaaaaaaacccagactctatgtataagaatctcatggtgtcc
cgtggagcacccaagccatccagtttagcacataaggaatatctttcacagtcttgtccc
tcggtatccaatgtagaatatccagatatgccacgttccctaccttcccacatggaagaa
gcacctaatgtctttcagctataccaaagaccagtttgtgcctcccgtaagaagcaaaaa
gaagatgctgattctgagtatcctctgactccacctccttctccaacaacagacagatcc
aagttgccctgtggaaaaagtaactttgatgattcattagttcatatcaatatatttcta
gtggataggaaacatcctgaattttcttctcactgtaacaaaattaaccgtagtgtagat
gttgattttaattgtctagatgtcttaataactttgcaaacttgggtagtgatactggat
ttctttgggattggatccactgctgataaccatgctatgaagctgcaacctgaagatact
cagcagacaatcaaatcagaaataaataccttgtcagcttctcaagcccaagaacctgta
aacactaagctggatctgaaggtccattctttatcgttagtattgaataagacaactagt
gagcttgctaaagccagcgtgtcaaaacttgcagctcacttggaagtgattgagggagat
ttagccctgcaaggaagtattggaagtctgtccttaagtgatcttacagctcatggagaa
ttttacagagaacgtttcactacgagtggtgaagaggcactcattttccaagtctataaa
tatgggaggccagatccattgctacaaagggagtgtgatattcgtgtcactctacgcatg
gcatctgttcagtatgtgcatactcagcgtttccaggcagaggtggtgtctttcatccaa
cattttactcagcttcaggatgtcttggggcggcaaagagcagcaattgaaggacaaaca
gtaagagataaagcacagcgagcttcccgagttcttcttgatattgaggctggtgctcct
gttctgcttatacctgaaagctcaaagtcgaatagtcttattgtagctaatcttggaaaa
ctgaaagtcaagaacagatttctgtttgcgggtatgccgggtactttttcactaaagaac
aaggattcagttcaattttcatctcctttgggaaccccaaaacatagcatgaagaaaaca
acaagtgctgatgaatcaaaagtagtgtcggaaggattgttcatgaaaaagtcatcagga
gcaaacatttctaggctgaagagtgagcctatgctgaatacattgagtaagcaacaaggg
caacaaccaaagctacctattgcgccaaaccccgacagcccagaggatcacatctgcctc
ttagactgcattgtggttgatctgcaggacatggacatatttgctgcggaaagatatcag
agggagtattcaaaggctgtggaaggtacaagtgcggacttgagctttccgtcctacttc
gtgaggcagacaggaggaagcctattaacagaacctttcagactgaaattacaagtagag
agaaacttagacaaagagctaagtcatgcagttgcagacatatcaatacatggcaatctg
tcgtcagtccattgctctctggatttgaataagtataaactgatacgtggactgctggag
aacaaccttggggagcctatagaagagttcatgcggccttatgatttgcaggatccaaga
attcatacagttttgagtggagaagtatatacttctatgtcattcctcattgacatggtt
aatgtgagtctggaactgatggatccaaaaggaaaagatggatgcagctctttagccagg
tttgattttaagaaatccaagttgctttttgaaagctcttcaaatggaacgaagtctgta
aatttggtttctcattccatgatggcatttgacacacgttatgctggacagaagtctact
gcaggcacgctgaatgtgttcagttgcatctttcagtcatcaaagaatactagtagtcca
ggagcaatccagattgaattgcacttcag
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integrated database retrieval system
