KEGG   Fulmarus glacialis (Northern fulmar): 104078544
Entry
104078544         CDS       T08370                                 
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
fga  Fulmarus glacialis (Northern fulmar)
Pathway
fga03030  DNA replication
fga03410  Base excision repair
fga03420  Nucleotide excision repair
fga03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104078544 (RFC2)
   03410 Base excision repair
    104078544 (RFC2)
   03420 Nucleotide excision repair
    104078544 (RFC2)
   03430 Mismatch repair
    104078544 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fga03032]
    104078544 (RFC2)
   03036 Chromosome and associated proteins [BR:fga03036]
    104078544 (RFC2)
   03400 DNA repair and recombination proteins [BR:fga03400]
    104078544 (RFC2)
DNA replication proteins [BR:fga03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104078544 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    104078544 (RFC2)
Chromosome and associated proteins [BR:fga03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104078544 (RFC2)
DNA repair and recombination proteins [BR:fga03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104078544 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    104078544 (RFC2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 RCF1-5-like_lid Viral_helicase1 AAA_24 AAA_11 Mg_chelatase AAA_assoc_2 DNAX_ATPase_lid AAA_19 MipZ nSTAND3 AAA_18 AAA_5 AAA_28 ABC_tran AAA_30 AAA_25 AAA_23 NTPase_1 MeaB RNA_helicase SLFN-g3_helicase Rad17 RuvB_N FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 104078544
NCBI-ProteinID: XP_009578511
LinkDB
Position
Unknown
AA seq 310 aa
MKLCKIVGNEDTVSRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLE
LNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKT
TRFALACNASDKIIEPIQSRCAVLRYTKLTDSQILARLLKIVEKEDVPYTDDGLEAIIFT
AQGDMRQALNNLQSTYSGFGFINSENVFKVCDEPHPLLVKEMIQHCINANIDEAYKILAH
LWRLGYSPEDVIGNIFRVCKTFQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARL
CQKTAAPAAS
NT seq 933 nt   +upstreamnt  +downstreamnt
atgaaattatgcaaaatagttggaaatgaagacactgtgagcaggttggaggtctttgca
aaagaggggaacgtaccaaatattataattgctggtcccccaggaacaggtaagaccacc
agtatcctctgcttggctcgtgctctgcttggtcctgcattaaaggatgctgttttggag
ctgaatgcctcaaatgacagaggcattgatgttgtgagaaacaaaatcaaaatgtttgcc
cagcaaaaggtcacacttccaaaaggtcggcataaaataatcatccttgatgaagcagac
agcatgacagatggagcacagcaagcattgagaagaacaatggaaatttattccaaaaca
acgcgcttcgcacttgcgtgcaatgcctctgacaaaatcatagaacctattcaatcccgg
tgtgcagtgctgcgttacaccaagctgacagattcacaaatccttgcaaggctactgaaa
attgttgagaaagaggatgtaccatatacagatgatggactagaagccattatcttcaca
gcccaaggagatatgagacaggcattaaacaacttacagtccacatattctggatttggc
tttataaacagtgaaaatgtctttaaggtatgtgacgagcctcaccctctgcttgtgaaa
gaaatgatacaacactgcataaatgcaaatattgatgaagcatacaagattcttgcccac
ctgtggcgacttggatactctccagaagatgtgattggcaacatctttcgtgtgtgtaaa
acctttcaaatgccagaatatctgaaactggaatttatcaaggaaatcgggtacactcat
atgaagatagcagaaggtgtgaactcacttttacaaatggctggactgctggccaggctg
tgtcagaagaccgcagcccctgcagcaagttag

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