Fulmarus glacialis (Northern fulmar): 104079211
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Entry
104079211 CDS
T08370
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104079211 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fga03019
]
104079211 (DDX6)
03036 Chromosome and associated proteins [BR:
fga03036
]
104079211 (DDX6)
Enzymes [BR:
fga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104079211 (DDX6)
Messenger RNA biogenesis [BR:
fga03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104079211 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
104079211 (DDX6)
Chromosome and associated proteins [BR:
fga03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104079211 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
104079211
NCBI-ProteinID:
XP_009579459
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNANTINNGTQQQAQ
SMTTPIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVEHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVED
EKQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttataatgggtctatccagtcagaatgggcag
ttgagaggccctgtaaaacccagcgggggcccaggaggtggaggcacacaaactcagcaa
cagatgaaccagctgaaaaatgccaacacaatcaataacggcactcaacagcaagcacag
agtatgaccacccctattaaacctggtgatgactggaagaagactttaaaactccctcca
aaggatttgagaatcaaaacttcggacgtgacctccacaaaaggaaacgagtttgaagat
tactgtttgaaacgggagttgctgatgggaatttttgaaatgggctgggaaaaaccatct
cctattcaggaggagagcatccccattgctttatctggtagggatatcttggctagagcg
aaaaatggaacaggcaagagtggagcctacctcattcctttacttgaacggctagactta
aagaaggacaatatacaagcaatggtgatcgttcccacccgtgaactagccctgcaggtc
agtcaaatctgtatccaagtcagcaaacacatgggaggtgccaaagtgatggcaacgacg
ggaggaaccaatttgcgagatgatataatgaggcttgatgatacagtgcatgtggtgata
gctacccctgggagaattctcgatctcatcaagaaaggagtagcaaaagttgagcatgtc
cagatgatagtattggatgaggcagataagttgctgtctcaagatttcgttcaaataatg
gaagacattattctcacgctacctaaaaacagacagattttgctctactcagccactttc
cctttgagcgtacagaagttcatgaattcccatttgcagaaaccctacgagattaatctg
atggaggagctgaccttgaagggagttacccagtactatgcctatgtaactgaacgtcag
aaagtacactgcctcaatacgctgttttccaggctccagattaaccagtcgatcattttc
tgcaactcctctcaacgggttgaattgctagccaaaaagatctcccagctgggctattcc
tgcttctatatccatgctaaaatgaggcaggagcaccgcaatcgtgtgttccacgatttc
cgaaatggcttatgccgcaatcttgtttgcactgatctgtttacccgaggtattgatatc
caagctgtgaatgtggtgataaactttgatttcccaaagctggcagagacttatctccat
cgtattggcagatcaggtcgctttggtcatcttggcctggccatcaacttgatcacctat
gatgatcgattcaacctgaaaagtattgaggagcagttgggaactgaaattaaacccata
ccaagcaacattgacaagagcctgtatgtggcagaataccacagtgaacctgtagaagat
gagaaacagtaa
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