Fulmarus glacialis (Northern fulmar): 104079719 Help Entry 104079719         CDS       T08370                                  Symbol COL27A1 Name (RefSeq) collagen alpha-1(XXVII) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism fga  Fulmarus glacialis (Northern fulmar) Pathway fga04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:fga00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     104079719 (COL27A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:fga00536]     104079719 (COL27A1) Glycosaminoglycan binding proteins [BR:fga00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104079719 (COL27A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 GH131_N Motif Other DBs NCBI-GeneID:  104079719 NCBI-ProteinID:  XP_009580145 LinkDB All DBs Position Unknown AA seq 1728 aa AA seqDB search GFCFLWTVLCFTWFLGFTQGNSEDVDVLQRLGLSGKRPSSGWSSSRTVPQGVIPFKSGVI FTQRARVEAPVSTILPAGSSTDLLLVLSLCSHRINNAFLFAVKSKKKKLQLGVQFVPGKI IVYVGHKRSVYFDYNVHDGQWHNMAIDIRGQSVTLFTSCGKRRVHADLHFKKDEAVDPHG SFLFGKMNQHSVQFEGAICQFDIYPSAKAAHHYCKYLKRQCRQADTYRPNLPPLIPLLPR YPSASPSTPQHMEPSLQGLRNLTTAAPSLEFGRVTAPLKTRGSGATTVALVSSPPSLPRL TTKATKVTVAPSPVPSSTETQPPTRSVRRGTVMTLRVSRPTPSTRIEKTPLPTAKKAPAT SQSPATASRKESKQETKKKINQKPTTEPSEAPSTVKPMRRMTDNTTSNVHFVTLKQTPPN PSNGPIPKKHMPSPARKVDPSNVPLVYTKPPLGSARPVSRARAQAFNFTTPAATDGYQIF DPLGPTPFPFLLGYPGVKGERGPQGPPGLPGLPGPPGKRGSRGPPGPHGNPGSPGPPGLK GQKGDPGLSPGKARNGQKGDVGLPGLTGFPGPPGRKGYKGYPGPPGHPGDQGERGPDGSP GAKGYPGRQGLPGPIGEAGPKGSRGYIGLPGLFGLPGADGERGIPGVPGKRGKMGRPGFP GDFGERGPPGIDGNPGELGAPGPPGVLGLIGDMGSVGPIGYPGPKGLKGLMGNPGEHGLK GDKGDQGGAGVPGDIGFQGDKGSQGLPGVPGARGKAGPLGKVGDKGPVGFPGPPGPEGFP GDIGPPGENGPEGLKGKPGARGLPGPRGLPGQEGDEGPLGPPGVPGPEGRSGRKGFPGRP GPDGLKGEPGNRGRPGKVGEQGLMGFIGPVGEPGMVGEKGDRGSVGPPGPPGVKGSMGHP GTPGGVGFPGIPGPTGPAGVRGAPGIRGMKGRRGARGPDGSVGEPGSRGVKGRPGEPGKL GPDGLQGKMGETGETGARGFPGIQGPSGPPGAKGAPGDPGPQGPQGLPGPLGEIGHKGPP GSMGQPGLAGEPGMKGDPGQLGVPGEQGLVGQRGESGLEGDSGPPGPDGVKGDKGEQGLE GEKGEKGNEGLKGKEGPPGYPGITGVRGPEGKPGKQGEKGKPGQKGSKGYQGQLGETGSP GKEGPKGNQGPKGSRGTLGPMGAPGRMGAQGEPGLKGYQGHAGPPGPIGPPGPKGEKGEQ GDDGKVEGPQGPPGDRGPVGDRGDRGEPGDPGYPGQEGLDGERGKPGQQGLPGDPGPPGQ PGAKGSKGDVGQKGKQGARGNAGSRGSPGILGLPGPRGVVGRQGQEGAPGVDGVPGKDGM PGMLGEQGDDGEEGVTGMSGKRGNPGIPGLPGAQGPPGFKGERGLPGQTGQTGKRGSSGG TGLPGTPGDPGPKGQPGDFGEAGFPGIAGMFGPKGPPGDLGFKGIQGPRGPPGLMGKEGI IGPLGIQGPMGSPGPKGDKGSRGEMGLQGPRGPPGPRGHPGPPGPPGIPASFQQDGFGAA FRTLIDSNIALKTEGYQHPDLLMLDHGGEIFKTLHYLSNLIQSIKRPLGTKENPARICRD LMNCEQKMNDGTYWIDPNLGCSSDTIQVICNFTNGGQTCLSPITVSKLDFDIGRVQMNFL RLLSSEVVQHITIHCLNTSVWQEGSSKKPSEKAVRFRAWNGQMFEADGQLRPEVAADDCK IKDGRWHRTLFSFRTQDPQQLPIVNIYNLPPSEPGKQYHLEVGPVCFL NT seq 5188 nt NT seq  +upstreamnt  +downstreamnt gggattctgctttctctggactgtattatgttttacctggttcctgggattcacacaggg aaattctgaagatgtggatgttcttcaaagactgggcctgtcagggaaaaggccatcgag tggatggtcctcatcacgtacagttcctcaaggggtcattcctttcaaatcaggagtcat cttcactcagcgagcacgtgttgaagcaccggtcagcaccatcctccccgcaggctccag cactgacctactcctagtgctgagcctctgctcccaccgcatcaacaatgctttcctctt tgctgtcaagagcaaaaagaaaaaactgcagctgggggtccagtttgtgcctgggaagat catagtgtatgtgggccacaagcgctctgtatattttgattacaatgtccatgatggcca gtggcacaatatggccatcgatatccgtggccagtcagtcactttatttacttcttgtgg gaagcgcagagtacatgcggatttgcattttaaaaaggacgaggcagtggatccacatgg atctttcctctttgggaagatgaaccagcactccgtgcagtttgaaggagccatctgcca gtttgatatttatccttccgccaaggcagctcatcattactgtaaatacctaaaaagaca gtgcaggcaagcagatacctaccggccgaacctgccccccctcatccccctcctgcccag gtatcccagtgcctccccgagcaccccacagcatatggagccctcgctgcagggtctgag aaacctgacaactgctgccccatccttggaatttggcagggtcactgcacccctcaagac tcggggttcaggtgcaacaacggtcgcattggtatcatccccaccatcgctgccgagact gacaaccaaagccacaaaggtcactgtggccccgtctcctgttccgtcgagtactgaaac acagccacccacccgttcggtccgtcgggggacggtgatgaccctcagggtgtctcggcc cactcccagcacgcgcatcgagaaaactccccttcccactgccaaaaaggccccagcaac aagccagagccctgccacggccagcaggaaggagtccaagcaagagaccaaaaagaagat caaccaaaaacccaccactgagccctctgaagcacccagtactgtaaagccaatgaggag gatgactgataacacaaccagcaatgtccactttgtcaccctaaagcaaaccccgccgaa tccaagcaatgggcccattccaaagaagcacatgccgtcccccgccaggaaagtggatcc tagtaacgtccctctggtgtacaccaaaccacccctggggtctgcccgtcccgtctccag agccagggcacaggccttcaacttcacaaccccagctgcgactgatggctatcaaatctt tgaccccctcggacccactccgtttccatttctactgggatatccaggagtgaaaggaga gagaggacctcagggcccaccaggtctgccaggcttaccaggaccacctggcaagagagg ttctcgaggtcccccgggtccccacggaaaccctggctcacctggccccccaggcctgaa aggtcagaaaggtgatcctgggttgtcgcctggaaaagctcgcaatggacagaagggaga cgtgggcttacctggtttgactgggttccctggaccacctggtagaaagggttataaagg ctaccctggaccaccaggccaccctggagaccagggcgaacgaggaccagatggaagtcc aggtgccaaaggttatcctggcaggcagggtttacctggccccataggggaagctggtcc aaaaggcagtcggggatacattggtctcccaggattatttgggctaccaggggctgatgg agaacgagggatccccggagttcctgggaagaggggcaagatgggtaggccgggttttcc tggtgattttggggaacgaggacctccaggcatcgatgggaacccaggagaattgggagc cccaggtcctcctggagtccttggactcattggtgacatgggctctgttggaccgatagg ctatccaggaccaaaaggcttaaagggactgatgggaaaccctggagaacatggactgaa aggtgataagggtgatcagggaggagcaggtgttccaggagatatcggcttccaaggaga caagggcagccagggtttgcctggggtccctggggcacgagggaaagcaggccccctggg aaaagtcggtgacaaaggtccagtcgggtttccaggaccacctggccctgagggcttccc aggtgatattggccctcctggagaaaatggtcctgaaggcctgaagggaaagccaggagc acgaggtttacctgggccgagaggactgcctggacaagagggagatgaaggacccttagg accaccaggagtccctggtccagagggtcgatctggccggaagggatttcctggaagacc tggtcccgatgggctaaagggtgagccaggaaaccgtggccgaccagggaaagttggtga gcagggtctaatgggtttcattggtccagtaggagagcctggaatggtgggagaaaaggg cgaccgtggctcagtgggacccccaggccctccgggagtcaaggggtcgatggggcaccc cgggacaccaggaggagtgggctttcctgggatccctggaccaacaggtccggcaggagt ccgtggtgcaccagggataagagggatgaaaggccgcaggggtgccagagggcctgatgg atcagtaggcgagccggggtcacgaggtgtcaagggccgaccaggggagccaggcaagct ggggccagatgggctgcaggggaagatgggtgagactggggagacaggagcacgcggctt cccaggtatccaaggaccttctggacctccaggagcaaaaggggctccaggcgacccggg tccacaaggaccacaggggctacctgggcctttgggagaaattgggcataagggaccgcc tggctcaatgggacaacctggccttgcaggtgaaccgggcatgaagggtgatcctggcca gttgggtgtccctggagagcaaggcctcgttggccagagaggagaatcggggctggaagg ggacagcgggccacccgggccagacggtgtcaagggagacaaaggagagcaaggcctgga gggagagaaaggagaaaaaggcaacgaaggactgaagggaaaagaagggcctcctggata tcccggcatcacaggtgtccgaggaccagaagggaaaccaggaaaacagggggaaaaggg caagcctggccagaagggcagcaagggctaccaggggcagctcggcgagacaggatctcc agggaaggaggggccgaaggggaaccaaggccctaaaggatcccgaggtaccctgggacc tatgggtgctccgggaaggatgggtgctcaaggggaacctggcttaaagggttaccaggg acatgcaggaccaccaggacccattggaccaccagggccaaagggggaaaagggagaaca aggtgatgatgggaaggtagaaggcccacagggaccacctggagacagaggccccgttgg tgacagaggtgatcgaggggagcctggagaccctggttatcctggtcaagaaggtcttga cggagaaagaggaaaacccggacagcaaggcttacctggggatcctggaccaccaggcca gccaggagcaaagggatccaaaggtgatgtgggtcaaaaaggaaagcaaggagcacgggg caatgcagggagcagaggctcaccgggcatccttggactaccaggtcctcgaggagtggt gggaaggcagggtcaagagggtgcccctggagtggacggagtgcccgggaaggatggcat gcctgggatgctgggagaacagggtgatgatggggaagaaggtgtgacagggatgtcggg caaaagagggaaccctggcataccaggactccccggggcacagggaccaccaggattcaa gggtgaaagaggattgcctggacagaccggccaaacagggaagcgaggatcatcaggagg aacgggccttccagggacccccggcgatccgggacccaaaggacagccgggagactttgg cgaggcaggatttccagggattgcgggcatgtttgggccaaagggccccccaggagacct tggtttcaaaggcattcagggaccacgtgggccgcctggtctcatgggaaaagaaggaat tattggtccgcttggcattcagggtcccatgggaagcccagggcccaagggagacaaagg cagccgcggagaaatgggtctgcaaggtccaaggggtcctccaggcccacgaggacaccc tggccccccgggaccaccaggaattccagcctcatttcaacaagatggctttggggcagc tttccggacgctgattgactcgaacattgcgctcaagacagagggttaccaacatccaga ccttctcatgctggaccatggaggggagatctttaagactctacactacctcagcaacct cattcagagcatcaaaagacccctgggaaccaaggaaaaccctgcacgcatctgtcgaga cctcatgaactgtgaacagaagatgaacgacggtacctactggatcgacccaaatcttgg ctgttcctcagacaccatacaggtcatctgtaacttcaccaatggtgggcagacgtgtct cagccccatcaccgtctccaagctggattttgacatcggtagagtccagatgaacttcct ccgcctcctgagctcagaggtggtgcagcacatcaccatccactgcctgaatacctccgt ctggcaggaaggctcatccaaaaaaccttcggaaaaagccgtgcgcttcagggcctggaa cggacagatgtttgaggcagacgggcagctcaggccagaagtggcagctgatgattgcaa gatcaaggatggacgctggcatcggactctcttttcatttcggacgcaggaccctcagca gctgccaattgtcaacatctacaacctccccccatccgagccaggaaagcaatatcacct cgaggtcggccccgtgtgcttcctttga

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