KEGG   Fulmarus glacialis (Northern fulmar): 104079915
Entry
104079915         CDS       T08370                                 
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
fga  Fulmarus glacialis (Northern fulmar)
Pathway
fga03040  Spliceosome
fga04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:fga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104079915 (PRPF19)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104079915 (PRPF19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fga03041]
    104079915 (PRPF19)
   04121 Ubiquitin system [BR:fga04121]
    104079915 (PRPF19)
   03400 DNA repair and recombination proteins [BR:fga03400]
    104079915 (PRPF19)
Enzymes [BR:fga01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104079915 (PRPF19)
Spliceosome [BR:fga03041]
 Complex B
  Other components
   Prp19 complex
    104079915 (PRPF19)
 Complex C
   Prp19-CDC5 complex
    104079915 (PRPF19)
Ubiquitin system [BR:fga04121]
 Ubiquitin ligases (E3)
  U-box type E3
   104079915 (PRPF19)
DNA repair and recombination proteins [BR:fga03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    104079915 (PRPF19)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_SCAP EIF3I ANAPC4_WD40 Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_Nup120_160 Beta-prop_ACSF4 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_SPT8 DUF1830 Cytochrom_D1 PROPPIN GP3
Other DBs
NCBI-GeneID: 104079915
NCBI-ProteinID: XP_009580402
LinkDB
Position
Unknown
AA seq 303 aa
LATLKPQAGLIVPQTVPSSQPNVAGAGESMDLGELVGMTPEIIQKLQDKATVLTTERKKR
GKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVIVFD
KSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHEGSVT
GLSLHATGDYLPPGLSLSPQRALPLFQYWAFSDIQTGRVLTKVTDESSGCGKAYGRVKSL
IFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKF
YSL
NT seq 914 nt   +upstreamnt  +downstreamnt
ctttggcgactctgaagccgcaggctggcctcatcgtgccccagacggtgccgtcctccc
agccaaatgtggcgggagctggggagtccatggatctgggagagcttgtgggcatgaccc
ccgagatcatccagaagcttcaagacaaggctacggtgctgaccacggagcgtaagaaga
gaggcaagactgttccagaggaactggtgaagccggaggaactcagcaagtaccggcagg
tcgcctcgcatgtggggctgcacagcgccagcattccagggatccttgccttggacctct
gtccttccgacaccaacaagatcctcaccggcggggctgataaaaacgtcatcgtctttg
acaagagctcagagcagatcctggcgacactcaaggggcactccaagaaggttaccagtg
tcgtcttccacccctctcaggacttggtgttctcagcttctcccgatgctactatccgga
tctggtctgtgcccaacgcctcctgcgtgcaggtcgtccgtgcccacgagggctctgtca
cggggctgagcctccacgcgacaggcgactacctcccccccggcttatctctctctcctc
aacgcgctcttcctctcttccagtactgggctttctcggatatccagacaggccgtgtcc
tcaccaaggtgacggatgagagctctggctgtggtaaggcttatggcagagtgaagtctc
tcatttttgaccagagcggcacctacctggccctgggcgggacggacgtccagatctaca
tctgcaagcagtggacggaaatcctccacttcacagagcacagcggcctcaccacaggag
tggctttcggccaccacgccaagttcattgcctcaacgggcatggaccggagcctgaagt
tctacagcctgtaa

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