KEGG   Fulmarus glacialis (Northern fulmar): 104080110
Entry
104080110         CDS       T08370                                 
Symbol
SMU1
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
fga  Fulmarus glacialis (Northern fulmar)
Brite
KEGG Orthology (KO) [BR:fga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fga03041]
    104080110 (SMU1)
Spliceosome [BR:fga03041]
 Complex B
  Other components
   Complex B specific factors
    104080110 (SMU1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_EML WD40_Gbeta Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_ACSF4 Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_TEP1_C Ge1_WD40 Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_NWD2_C Beta-prop_Aladin Beta-prop_NUP159_NUP214 Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_DCAF4 LisH_TPL Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_BBS7 Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_RSE1_2nd DUF7165 TFIIIC_delta VPS8_N Beta-prop_NOL10_N PROPPIN
Other DBs
NCBI-GeneID: 104080110
NCBI-ProteinID: XP_009580680
LinkDB
Position
Unknown
AA seq 499 aa
MQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSLKLPDKTLI
DLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENLLARSYFDPREAYPD
GSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPPGMTIDLFRGKAAVK
DVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKY
QAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLS
FSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVK
VWNVKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRS
FSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHP
HQNLIATYSEDGLLKLWKP
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgcagtacctgaaggagaacagcctccaccgagccctcgccactcttcaggaggaaact
actgtgtccctcaacactgtggacagtatcgagagctttgtggctgacatcaacagcggg
cattgggacacagtgctgcaagccatacagtcgctgaagctgcccgacaagaccctcatt
gatctctatgagcaggttgtgctggagttgattgagctccgggaactaggtgctgccagg
tctctcctgagacaaacagatcccatgatcatgctaaaacaaactcagccagagcggtac
atccacctcgaaaaccttctggccagatcttactttgatcctcgtgaggcatacccagat
ggaagtagcaaagagaagcggagagctgctattgcacaagctttagctggagaagtcagc
gtggtgcctccatctcgtcttatggcgttgttggggcaggcactgaaatggcagcagcat
cagggcctgcttcctcctggtatgacaattgacttgttcagaggcaaagcagctgtgaag
gacgtagaagaagaaaagttccccacacagctgagcagacatattaagtttgggcagaag
tcgcatgtggagtgtgctcggttttccccagatggacagtatctggttactggctctgtt
gatggtttcattgaagtatggaacttcactactggaaagattaggaaggatctgaagtac
caggcacaagataattttatgatgatggacgatgcagtgctgtgcatgtgcttcagcaga
gatacagaaatgctagcaaccggagcacaagatggaaagatcaaggtgtggaaaatccag
agcggtcagtgtctgagaagatttgagcgagcacacagtaaaggcgttacatgcctcagt
ttctctaaagacagcagccaaattcttagtgcttcttttgatcagacaatcaggattcat
ggtttaaaatctgggaaaactttaaaggaattccgtggtcattcttcctttgtcaatgaa
gctacttttacccaggacggccactatattatcagcgcatcctctgatggcacagtgaag
gtttggaatgtgaagacgacagagtgctcaaacaccttcaaatctcttggcagcactgct
gggacagacattactgtgaacagtgtcattctgctgcctaaaaacccagaacactttgtt
gtttgcaacagatcgaatacagtcgtcattatgaatatgcaaggacaaattgtaagaagt
tttagctctggtaagagagaaggtggtgactttgtctgctgtgcgctttcacctcgtggt
gaatggatctactgtgttggtgaagattttgtgctgtattgctttagcacagtgactggc
aagctggagagaactttgaccgttcatgaaaaagatgtcattggcattgctcatcacccc
caccaaaacctgattgccacttacagtgaagatggcctcctcaagctctggaagccgtag

DBGET integrated database retrieval system