Fulmarus glacialis (Northern fulmar): 104080236
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Entry
104080236 CDS
T08370
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03013
Nucleocytoplasmic transport
fga03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104080236
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104080236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fga03019
]
104080236
Messenger RNA biogenesis [BR:
fga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104080236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
104080236
NCBI-ProteinID:
XP_009580854
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MESQHPPVQKLVTPKAISLSVSRTQYFKPSLTPTTDSSKIHQRGDIKHKGMKEKSFPAEQ
QVRPSESNLTYPKFGTPASNGLSSVGAGGKMRREKXKISKPGQKQQDVEEPVLPKVPLPI
STASLPSFNFSFLASSTVSSSPSTVSTAVMNKVQPASNVGSPVFRFSSPIVKSTEVEMLP
PLSIGFTFSVPVVKSAEFSGSSDTRVTSLLTLDTASVNSTSNKKEEEEEYDGPSKPAKVL
KEGSVLDILKSPGFTSLKTHSSASAQPVTSTVVYTRPAISSFSAGKDTSKQASSFWQSDT
YDPCLQNKTTDGKCVTCQAAKVSTVESTKQTISSSQCVASKAAVPTAGTLGFEDKFKTAP
NTWDCDTCLVQNKPEATKCIACETPKPGTGVMPALTLPVVTDNSVTVTSSSSSTDTTVTL
GFGDKFKKPKGSWECAVCLVSNKAEDSKCVACQSEKPGSSVPVTSSSVSAFSASSGGFLD
LDKFKKPEGSWDCEVCLVQNKAEATKCVACESAKPGTKAELKGFGTATVSTNAAMPSFTF
GVQSSSSESSHTLGSTGNFKFGEQESFKFGIASESASSNTVTGAFKFPSSGDFKFGVSSS
DSKSEDSKKEGKSNSFTFGLPSTSSQAPSTFQFGTASLGQQEKKEEPVLASFGFGTSSTS
SIATSENKTGVSSFTFGTVAAKEVASPALAFKKSDGKKDETLSTKGGFSFGSVESAPASQ
FVLGRTEEKQDSVTSAAPLAFGKKADNEELKAQPIFSAGTAEHTKEESTAKPIFNFSFVK
PSEKETEQAKPSFAFGAQTSTSDQGAAKPSFSFLSSSSSSTVVPTTSANSSTVFGSAISS
SNSQPVPAPFVFGQPSNTVSSSVFGNSAESAASQSFGFSQENKPATTSSSTGSALASFLF
GSTASSTNAANSGFTFGATTTSSSTGSSSSFLFGSGNIPPAAGPAFGASQPPAFGQSQGS
SQPSAPSFGSLSTTLFSTGTQPAPPAFGSVTSSTQPSVFGQQATQQPGFGSGTPSAGSLF
QFGSNTSNFNFPNNPGVFTFGANPSAPAAPAQPSGSSGFSFSQPPAFTVGTNGKNVFSAS
GSSVSGRKIKTAVRRRK
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgcagcatccacctgtccagaaactcgtgacaccaaaggcaatctctctgtca
gtgagtcggacccagtattttaaaccatctctgactccaaccactgattccagcaaaatt
caccagaggggagatataaagcacaaaggcatgaaagagaagagttttcctgcagaacag
caagtaagaccatctgaaagcaatttgacctaccccaaattcggtactcctgcatccaac
ggtctgtcttcagtgggtgctggcggcaagatgagaagggaaaaanaaaaaatatcaaaa
cctggacaaaaacaacaggatgtggaggaaccagtactaccgaaagtacccctacccatc
agtactgcatcgctgccttcgttcaactttagttttcttgccagtagtactgtctcatcg
tcaccaagcactgtttcaacagcagtgatgaacaaggtacaaccagcaagtaatgttggc
agtcctgtgttcagattttcatctccaattgtgaaatctactgaggtggaaatgctacct
ccgttgtctattgggtttacatttagtgttcctgttgtaaaatcagcagagttttctgga
tccagtgatacacgagtgacgtccttacttactctagatactgccagtgtaaacagcacc
agcaataagaaggaagaagaagaagaatacgatggcccctccaaacctgcgaaggtctta
aaggaaggaagtgtgttagacattttaaaaagccctggctttacgtctttgaaaacacac
tcctctgcatctgcacagcctgttacaagcacagtggtctatacaaggcctgcaataagt
agtttttctgcaggtaaagacacctctaaacaagcatcctcattttggcagtctgacaca
tatgacccatgtctgcaaaacaaaaccacagatggcaaatgtgtaacatgtcaagctgct
aaagtgtcaacagttgagagtactaaacagacaataagctcaagtcaatgtgtcgcctct
aaggcagcagtccctacagcagggacattgggctttgaagacaaatttaaaacagcaccc
aacacatgggattgtgatacctgtctggtccagaacaagcctgaagctacaaaatgtata
gcatgtgagacaccaaagcctggaacaggagtaatgcctgctctgacattgccagtggtc
acagacaactcggtaacagtgacatcctcctccagcagcactgacacaacagtcactctg
gggtttggagacaaatttaagaagccaaaaggctcttgggagtgtgcggtgtgccttgta
tcgaataaggcagaagacagcaaatgtgtagcttgtcagtccgagaaaccaggaagttca
gtgcctgtgaccagtagcagtgtttctgcattttctgcttcttctggaggatttctggat
ttagacaaattcaagaagcccgaaggaagctgggattgtgaggtctgcttggtccaaaac
aaagcagaagccacaaaatgcgtagcctgtgaaagcgcaaagccaggcaccaaagcagaa
ctcaaaggttttggtactgctactgtgtccacaaatgctgcaatgccatcatttacattt
ggtgtccagtcgtcgtcctctgaatcttctcatacattaggtagcacaggaaattttaaa
tttggagaacaagagagcttcaagttcggcattgcatctgaatctgcatcctccaacact
gtgactggggcatttaagtttcctagttcaggggacttcaaatttggagtttcttcctca
gactctaaatcagaagacagtaaaaaagaaggtaaaagtaacagttttacctttggactt
ccatctacaagcagtcaggctccttcaacatttcagtttgggacagcgagcctgggacag
caggaaaagaaagaggaaccagttttggcaagctttggttttggcacgagttctacttct
tccatagctaccagtgagaataaaaccggagtgagcagcttcacttttggaactgtggca
gcaaaggaggtagcatcacctgctcttgcatttaagaagtcggatgggaaaaaggatgaa
actctttcaacaaagggaggcttctcttttggcagtgtggagtctgcacctgcctcacag
tttgttttgggaaggacagaagagaaacaggactctgtcacttctgctgctccattagca
tttggaaagaaagctgacaatgaagagttaaaggcacaacctatcttttcagctgggacg
gctgagcataccaaagaggagagcacagcaaaacctatattcaattttagttttgttaaa
ccatcggagaaggaaactgagcaggcaaagccgtcttttgcatttggagcacaaaccagt
acttcagatcaaggagcagcaaagccatccttcagcttcttgagctcaagttcctccagc
acagtcgtacccaccacttcagccaacagcagcaccgtgtttggcagcgccatctcttcc
tcaaattctcagccagttcctgctccctttgtgtttggacaacccagcaacactgtgagc
agctctgtttttggcaattctgcagaatctgcagcatctcagtcatttggcttctctcaa
gaaaacaaaccagcaaccacatcttccagcaccggctcggctcttgcttcatttctcttt
ggttcgacagccagcagtaccaatgcagcaaattcaggctttacctttggagccacaacc
acatcaagttcaacagggtcgtcctcttcattcctgtttggctctgggaacataccgcct
gctgccggcccagcatttggcgccagtcagccaccagcatttggccagagccaagggtcc
agccagccaagcgctccaagttttggatcgctgtcgacaacgttgttttccactggcact
cagcctgctcctcctgccttcggctcagtgacgagcagtactcagccctctgtgttcgga
cagcaagcgactcaacagccaggttttggctctggtacccccagcgctggttctttattc
cagtttgggagtaacacttctaatttcaactttccaaataaccccggagtatttactttt
ggtgcaaatccttctgcaccagccgcaccggcacagccttctggctcttcaggattttcg
ttcagccagcctccagcatttacagtggggactaatgggaaaaatgttttctctgcctct
ggatcttcggtttctggtcggaagataaagactgcagttagacgtagaaaataa
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