Fulmarus glacialis (Northern fulmar): 104080568
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Entry
104080568 CDS
T08370
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03013
Nucleocytoplasmic transport
fga03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104080568 (CASC3)
03015 mRNA surveillance pathway
104080568 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fga03019
]
104080568 (CASC3)
Messenger RNA biogenesis [BR:
fga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104080568 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
104080568
NCBI-ProteinID:
XP_009581295
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
ESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESAKVELKQDSNDSCESAAKAEKGDEKPD
SKGAVTGERQSGDGQESTEPVENKVGKKVPKHXXXXXXXXXXXRKNPAYIPRKGLFFEHD
LRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALYGYDIRSAHNPDD
IKPRRMRKPRFGSPPQRDPNWSNERPSKPPRHQGADSTSAPPRTFTNRSSAGTGRMPPPR
NYPRMGGYKETRPSYRASEASIQQLSRNGEQAKQESNYRAKRAEQTPPRDKSPEMEAAHV
HSSPVKEEVALENQATAADAAQPPPDRPIEKKSYSRARRTRIKAGDAGKLADEVPASEGL
TPVPPKPVQAETSPPPAKSGNWESPVESSLDGLEQEMTQMNLTEQNWTPGQSQFIQPREL
RGIPNHMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQRAPVPEPAPPMHISIMEGHYYD
PLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPMANPGLYPPPVSMPPG
QPPPQQLLAPTYFSPPGVMNFGNPGYPYPPGALPPPPPPHLYSNTQAQSQVYGGVTYYNT
VQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKSKERSNT
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
gaaagcgaggatggcatcgaaggagacgctgtactctcagattacgaaagcgcagaagac
tcggaggcagaggaagaggattacagcgaggaagaaagtgccaaagtggaactgaagcag
gatagtaatgattcttgtgagtcagcagcaaaagcagagaaaggggatgagaaacctgac
tccaaaggtgctgtaactggtgagaggcaaagcggggacgggcaggagagcactgaacct
gttgagaataaagttgggaaaaaagttcccaagcaccnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnntcggaagaacccggcttacatcccgcgcaaggggctcttctttgagcacgac
ctccgagggcagacacaggaggaggaggtcaggccgaagggtcgtcagcggaagctgtgg
aaggacgagggccgctgggagcacgacaagttccgggaggacgaacaggcccccaagacc
aggcaggagttgatcgcgctttatggctatgacatcaggtcagctcacaaccccgatgac
atcaagccgaggaggatgcgcaaaccaaggtttgggagtcctcctcagcgagacccaaac
tggtcaaacgagaggccaagtaagcccccaaggcaccaaggtgcagacagcacttcagct
ccccctcgaacgttcaccaacaggagctctgcaggtacagggaggatgcccccacctagg
aactacccgaggatggggggttacaaagagacccgtccaagctaccgagcttcggaagca
agcatccagcaactgtctcgtaacggcgagcaagccaaacaggagagcaactatcgagca
aagcgtgcagagcaaaccccaccaagagacaagtcacccgagatggaagcagcccatgtc
cacagcagccctgtgaaggaggaggttgctttggaaaaccaagccacggctgctgatgct
gcacagccaccgccagacagaccaattgaaaagaagtcttattcccgggcaagaaggacc
agaatcaaagctggggatgcgggaaagctggcagatgaagtgcccgcttcggaagggctg
actcctgtgcctccaaaacctgtgcaagccgagacatcccccccaccagccaagagcggt
aactgggagtcaccggtagaatccagcttggacggacttgagcaagaaatgacccaaatg
aatctcactgagcagaactggactccggggcagtctcagttcatacagccccgggagctg
aggggtattcctaaccatatgcacgtgggaactgggccaccgcctcagtttaacaggatg
gaggaaatggcggtgcaggggggccgcgtgaaacgctactcatcgcagcggcagagagcg
ccggtgccggagcctgccccccccatgcacatcagcatcatggaagggcattactacgac
ccactgcaattccagggaccaatctacacccacagtgagaacccggccccgctgccgccc
caagggatgatcgtacagccagaaatgcatctccctcatccaggtttacatccccaccag
acgccagcccccatggcaaaccctgggctgtaccccccgccagtctccatgcccccgggc
cagcccccgccgcagcagctgcttgcaccgacttacttctcccctcctggagtcatgaat
tttgggaatcctggctacccctaccccccaggagcactaccccctccgccccctcctcac
ctctattccaacacgcaggcccagtcccaggtgtatggaggagtcacgtactacaacact
gtccagcagcaagtgcagcccaagccttctccacctcgaaggacgtcccagcctgtgact
atcaagccaccgcctcctgaggacagcaaaggtgaaaagtcaaaggagaggagcaacacg
tag
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