KEGG   Fulmarus glacialis (Northern fulmar): 104080614
Entry
104080614         CDS       T08370                                 
Symbol
TNR
Name
(RefSeq) tenascin-R
  KO
K06252  tenascin
Organism
fga  Fulmarus glacialis (Northern fulmar)
Pathway
fga04510  Focal adhesion
fga04512  ECM-receptor interaction
fga04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:fga00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104080614 (TNR)
   04518 Integrin signaling
    104080614 (TNR)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104080614 (TNR)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:fga00536]
    104080614 (TNR)
Glycosaminoglycan binding proteins [BR:fga00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104080614 (TNR)
SSDB
Motif
Pfam: fn3 Fibrinogen_C FN3_DSCAM-DSCAML_C Pur_ac_phosph_N Fn3_Dep-1_3rd Fn3_PBP1 Fn3_VIN3 FN3_Tor_3rd Fn3_ROS1 Fn3_SaeA_2nd DUF2534
Other DBs
NCBI-GeneID: 104080614
NCBI-ProteinID: XP_009581356
LinkDB
Position
Unknown
AA seq 787 aa
YRLAVSALRGANESRPALAQFTTEIDAPKNLRVGSRTPASLELAWDNSEAEAHSYRVVYS
TLAGEHYHEVVVPRDTGPTTRATLADLVPGTEYGIGISAVMDSQQSVPATMNARTELDSP
RDLLVTASTETSISLTWTKATGPIDHYRVIFTPASGMASEVTVPRDESQLTLSELEPGTE
YTISIIAERGRQQSLEATVDAFTGVRPITQLHFSQLTSSSVNVTWSDPSPPADRLVLTYS
PRDEEEAQQLTLDGTRRHASLTGLQPSTEYLVSLVAMHGAISSEPVVGSISPGIDAPKDL
RVGNITQESMIVYWSPPIAAFDHYRISYRAAEGRTDSTAIASDATEYALRRLQPATKYEI
GVKSMRGREESEVASITVHTAMDAPLGVTATNVTPTEALLQWNPPLSDVESYILVLTRRA
VAGETILVDGVNQEYQLTNLLPSTTYTVSMYATNGPLTSQTISTNFTTLLDPPTNLTASE
VTRRSALLSWVPPVGEIENYIMTYRSTDGSRKELIVDAEDTWIRLEGLSETTEYTVRLQA
AQNAMRSGFISTTFTTGGRVFANPQDCAQHLMNGDTLSGVYTISINGDLSQRVQVYCDMT
TDGGGWIVFQRRQNGLTDFFRKWADYRIGFGNLEDEFWLGLDNIHKITSQGRYELRIDMR
DGQEAAYAYYDKFSIGDSRSLYKLRIGDYNGTSGDSLSYHQGRPFSTKDRDNDVAVTNCA
MSYKGAWWYKNCHRTNLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPYNHRNVSGR
KRRSLQL
NT seq 2364 nt   +upstreamnt  +downstreamnt
taccgcctcgccgtcagtgccctccggggtgccaacgagagccggccggccctcgcccag
ttcaccacagagatcgatgcccccaagaacctacgggtgggctcgcggacgcccgccagc
ctcgagctcgcctgggacaacagcgaggccgaggcgcacagctacagggtggtctacagc
accctggccggggagcactaccacgaagtcgtggtgccgcgggacaccggtcccaccacc
cgggccaccctggcagatctggtgccggggacagagtacggcattgggatttcggccgtg
atggacagccagcagagcgtgccggcaaccatgaatgccaggactgagcttgatagcccc
cgggacctcctggtgacggcctccacagagacgtccatctcgctgacctggaccaaagcc
acaggtcccatcgaccactaccgcgtcatcttcacccctgcctcggggatggcctccgaa
gtgacggtgccccgagatgaatcacagctcaccctctcggagctggagcccgggacggag
tacaccatctccatcatcgcagagaggggacgccaacagagcctggaggccaccgtggat
gccttcacaggggtccggcccatcacgcagctccacttctcccagctgacgtcttccagc
gtgaacgtcacgtggagtgatccatccccgccagcagaccgcctcgtcctcacctacagc
ccccgggacgaggaggaggcacagcagctcacgctcgacggcacccgcaggcacgccagc
ctgacgggcttgcagccatccaccgagtacctggtgtcactggtggccatgcacggtgcc
atcagctccgagcctgtcgtgggctccatctcaccagggatcgatgcgccgaaggacctc
agggtgggaaacatcacccaggagtccatgatcgtctactggagccctcccatcgctgcc
tttgaccactatagaatatcctaccgtgccgccgaagggaggacagacagcaccgccatc
gccagcgatgccaccgagtacgccctccgccgcctgcagcccgccaccaagtacgagatc
ggggtgaagagcatgcggggccgggaggagagcgaggtggcctctatcactgtgcacaca
gccatggatgcccccttgggggtcacagccaccaacgtcacccccaccgaggcactgctg
cagtggaatccgccgctgtcagatgtggagagctacatcctcgtcctcacccgccgcgca
gttgcaggagaaacaattctcgtggatggagtcaaccaggagtaccagctgaccaacctc
ctgcccagtaccacctacacagtctccatgtacgccaccaacgggcctctcaccagccag
accatcagcaccaactttacgactcttttggatcctccaacaaatctgaccgccagcgaa
gtcactcggcggagtgccctgctctcctgggtgcctcccgtgggagagatcgagaactac
atcatgacctacagatccactgatggcagccggaaggagctgattgtggatgccgaggac
acgtggatccgcctggaggggctttctgagaccacagagtacaccgtgcgcctgcaagct
gcccaaaacgccatgcggagcggcttcatctccaccaccttcaccacaggtggccgtgtc
tttgctaaccctcaggactgcgcccagcacctgatgaacggagacacgctgagcggcgtc
tacaccatctccatcaacggggacctcagccagcgagtgcaggtgtactgcgacatgacc
accgacggaggcggctggattgtcttccagaggcggcagaacgggctgactgatttcttc
cggaaatgggcagattacaggattggctttggaaacttggaagatgagttttggctgggc
ttggacaacattcacaagatcacgtcccaggggcgctacgagttgcgaatagacatgagg
gacggccaggaagcggcgtacgcctactatgacaagttctccatcggcgactcccggagc
ctgtacaagctgcgaatcggggactacaatggcacttcaggggactccctcagctatcac
cagggccgccccttctccaccaaggacagggacaacgatgtcgctgtgaccaactgcgcc
atgtcctataaaggggcctggtggtataagaactgtcaccgcaccaacctcaacggcaag
tacggagagtcccgccacagtcaggggattaactggtaccattggaaaggccacgagttc
tccatccccttcgtggaaatgaagatgcgaccttacaaccaccgtaatgtctctgggagg
aagcgacggtccctacagctctga

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