Fulmarus glacialis (Northern fulmar): 104080918
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Entry
104080918 CDS
T08370
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104080918 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fga03000
]
104080918 (CNOT4)
03019 Messenger RNA biogenesis [BR:
fga03019
]
104080918 (CNOT4)
04121 Ubiquitin system [BR:
fga04121
]
104080918 (CNOT4)
Enzymes [BR:
fga01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104080918 (CNOT4)
Transcription factors [BR:
fga03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104080918 (CNOT4)
Messenger RNA biogenesis [BR:
fga03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104080918 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104080918 (CNOT4)
Ubiquitin system [BR:
fga04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104080918 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCCH_2
Torus
Motif
Other DBs
NCBI-GeneID:
104080918
NCBI-ProteinID:
XP_009581758
UniProt:
A0A093J502
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
VLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGR
TLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKLLQEL
YKLNPNFLQLSTGTVDKNKNKVTALQRPNSNNKDAWPSLQSSSKSANGLTMEHRKTPPIL
ENGTDPEHMTPDGAHSDFGPIDKPSDSLSIGNGDSSQQITNSDTPSPPPGLTKPNPVIPI
SSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSNDWPTAPEPQSLFT
SETIPVSSSTDWQAAFGFGSSKQQEDDLGFDPFDITRKALADLIEKELSVQDQPSLSPTS
LQNPTPHTTTAKGPGSGFLHPAAPTNANSLSSTFPVMPQRFPQFQQHRAVYNSFSFPGQA
ARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHSTGLGGIPISDNSSSVESLNMKE
WQDGLRALLPNININFGGLPNASSPSNANHSVPTSNTATTDSLNWDSPGSWMDPAIITGI
PASTGNSLDTLQDDNPPHWLKSLQALTEVDGPSAAPSQTHHSNPFGTQIPLHRASWNPYS
PPSNPTSFHSPPPGFQTAFRPPSKTPTDLLQSSALDRH
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
gttttgaaacgaccagaatattttgggaagtttggtaaaatacataaagttgtcattaat
aacagcacatcatatgcaggctcacagggtccgagtgccagtgcatatgtaacctacatt
cggtcagaagatgctctcagagccatacaatgcgttaataatgtggtggtagacggcaga
acacttaaggcatcattaggtaccacaaaatattgcagttattttctaaaaaatatgcag
tgtccaaaaccagactgtatgtatctacatgagctgggagatgaagcagccagtttcaca
aaagaggaaatgcaggcgggtaagcaccaggaatatgaacagaaactactgcaagaatta
tacaaactaaaccccaactttctccaattatctacgggtacagttgacaagaacaagaac
aaagtgacagcactgcagagacccaacagtaataacaaagatgcctggccatcattacag
agttcaagtaaatcagccaacggtttaacaatggaacacaggaaaacgcctcctatatta
gaaaatggcacagacccagaacacatgactccagatggtgcacactcagatttcggccct
attgacaaaccttcagattccctcagtataggaaatggtgacagctcccagcagataaca
aacagtgacacaccttcaccaccgcctggtttaacaaaacccaatccagtcatacccatc
agttcatctaatcacagtgcacggtccccttttgaaggggctgtaacagaatcacagtcg
ctcttctctgacaactttcggcaccctaaccccatccctagtgggcttcctccattcccc
agctctccacagacttcaaatgactggcccacagcaccagaaccacagagcctcttcaca
tcagaaactataccagtatcctcctccacagactggcaagcggcttttgggtttggttcc
tccaaacagcaagaggacgacttagggtttgacccctttgacatcacccgcaaagcctta
gcagacctgattgagaaggaactgtcagtgcaagaccaaccttccctctcgcccacatct
cttcagaaccctaccccacacactacaactgccaaagggccaggctctggattcctgcat
cctgctgcacccacaaatgccaactctctcagtagcacctttccagtcatgccacagagg
ttcccacagtttcaacagcatcgagcagtttacaactccttcagttttccaggccaagca
gctcgctacccttggatggccttcccacgcaatagcatcatgcacttgaaccacacagca
aatcccacctcaaatagtaatttcttggacttgaatctcccaccacaacacagcacaggt
ctgggagggatccctatatcagacaacagcagttctgtagagagtttaaatatgaaggaa
tggcaggacgggctaagggcacttctaccgaacattaacatcaactttggtggactgccc
aatgcttcttccccctccaacgccaaccacagtgtaccaacgtccaacactgccaccacc
gacagcctgaattgggacagccctggcagctggatggaccccgcaatcatcacaggtatc
ccagcctccacaggaaacagtttagacacccttcaagacgacaatcctccacattggcta
aagtctcttcaggccctcacagaggtggacggccccagtgcagcaccatcacagacgcac
cacagtaaccccttcggcacacagatccctctgcacagagccagttggaatccctactct
cctccttcaaaccccaccagcttccattccccacccccaggctttcagacagccttcaga
ccccccagtaaaacccccacagatctactacagagctcagcactggatcgtcattag
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