Fulmarus glacialis (Northern fulmar): 104082325
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Entry
104082325 CDS
T08370
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase PDZRN3-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
fga
Fulmarus glacialis (Northern fulmar)
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fga04121
]
104082325
Enzymes [BR:
fga01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104082325
Ubiquitin system [BR:
fga04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
104082325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
104082325
NCBI-ProteinID:
XP_009583709
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MGCSLCTLQKQEEQYKLLYEVCQVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRTPRTK
VFTPPHDSQLVDVGTQTDITFEHIMALSKMGSPTPPVSVLDPYLLPEDCYILHPSVHEYY
DPNDYMGGIHQEMDRDELELEEVDLHRVNSQDKLGLTVCYRTDDEDDMGIYVSEIDPNSI
AAKDGRLREGDRIIQINGIEVQNREEAVALLTSEESKNISLLVARPEIQLDEGWMDDDRN
DFLDDLHMDMLEEQHHQAMQFTASMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDDS
TRNDESSEQENNADDHTTSSNTLGSQKKLTYSHDTLGSGDMQFSNESFISADCTDVDFLG
IPVDECERFRELLELKCQVKSANPYSLYYHNSTLDMSKSDQESVDRELEMLNEELRNIEL
ECLNIVRAHKMQQLKDQYREPWMLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSA
YNTGESCRSTPLTLEISPDNSLRRTAEGINCQGNEGAVAYNVSQKNLFASSESHESSTGK
CHASAKDPDLGKQLESKERKASDGSKSPTHGQKPSGSYVSPYHHSPYKHAHIPAHAQHYQ
SYMQLIQQKSAVEYAQSQMSLVSMCKDFNSSQSEPRMEWKVKVRSDGTRYITKRPVRDRL
LRERAIKIKEERSGMTTDDDAISEMKMXXXXXXXXXXRKQHLVKAKEQRRRREFMMQSRL
DCLKEQQGTEEKKEMNIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSF
LSVTTV
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcagtttgtgcactctacagaagcaagaagaacagtacaagttactgtatgaa
gtttgtcaggtcaatgggaaggatttatctaaagcaacacacgagcaggcagtggaagca
ttcaaaacagccaaggagcccatcgtggtgcaggtcctgagaagaactccacgcaccaag
gtctttactcctcctcacgactctcagctggtagatgtgggcacacagacagatatcact
tttgaacacatcatggctctaagcaagatgggctcacctactccacccgtctctgtgcta
gacccatacctcctacctgaagactgctacattctccatccatcagtgcatgaatactat
gacccaaatgactacatgggaggaattcatcaagaaatggaccgagacgagttagaatta
gaggaagtagatttacatagagtgaacagccaggacaagcttggccttactgtatgttac
agaacagatgatgaagatgacatgggtatttatgtgagtgagattgatcccaacagtatt
gctgcaaaagatggtcgactccgagaaggggatcgcattattcagatcaatggtatagag
gtacagaaccgagaagaagctgtggcacttctcaccagtgaagagagcaagaatatctcc
ttacttgttgcaagaccagaaattcagctggatgaaggatggatggatgatgacagaaat
gattttctggatgacttgcacatggacatgttagaggagcagcaccaccaggcaatgcaa
tttactgccagcatgcttcagcagaagaagcatgaggaggatggaggtaccacagataca
gccactattttatctaaccagcacgagaaggacagcggtgtggggcgcacagacgacagc
actcgcaacgacgagagctccgagcaggaaaacaacgcagatgatcacaccacctcctcc
aacactttagggagccagaagaagctgacatacagtcacgacaccctaggaagcggcgat
atgcagttcagcaatgaatcatttatctcggccgactgcacagacgtcgacttccttggc
atccccgtagacgaatgcgagcgattccgggaactgctggaacttaagtgccaggtgaag
tctgccaacccttacagtctgtattatcataacagcacactggatatgagcaaaagcgac
caagaaagtgttgacagagagctggagatgctgaacgaggagctacgcaatatcgagcta
gagtgcctgaatattgtgagagctcataaaatgcagcagctgaaggatcagtaccgggag
ccctggatgctgcacaacagcgggttccgcaactataacacaagcatcgatgttcgcagg
cacgagctctcagacattacagagctccccgagaagtctgacaaggatagctcgagtgca
tataacacaggcgaaagctgccgaagcacaccactcacgctggagatttcccctgacaat
tcactgcgcagaactgcagaaggcattaactgccaaggtaatgagggggcagtggcatat
aatgtctcccaaaagaatttatttgctagctcagaaagtcatgaatccagcactggtaaa
tgccatgcctctgctaaagatcccgaccttggcaaacagctggaaagcaaggagagaaaa
gccagtgatggaagcaaaagccctactcatggtcagaaaccttcgggctcctatgtctcc
ccgtaccatcactctccatataagcatgctcatattcctgcccacgcacagcactatcag
agctacatgcagctgatccaacagaaatcagcggtggagtatgcacagagccaaatgagt
ctggtaagtatgtgcaaagactttaattcaagccagagcgaaccaaggatggagtggaaa
gtcaaggtcagaagcgatgggacccgctacattacaaagaggcctgtcagggacaggctg
ctgagagaacgtgccataaagattaaggaggagcgcagtggtatgactaccgatgatgat
gccataagtgaaatgaagatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcggaagcag
catttagtgaaagcaaaggagcagaggaggaggcgcgagtttatgatgcagagccggtta
gattgcttaaaggaacagcaaggtacagaagaaaagaaagagatgaatatcattgaactg
agccacaaaaaaatgatgaagaagagaaataaaaaaatatttgacaattggatgacaatc
caagaactgctaacccacggaacaaagtcaccagacggcacacgggtgtacaattccttc
ctgtcagtgactactgtataa
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