Fulmarus glacialis (Northern fulmar): 104083128
Help
Entry
104083128 CDS
T08370
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104083128 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fga03400
]
104083128 (MSH6)
DNA repair and recombination proteins [BR:
fga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104083128 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
PWWP
MutS_II
Motif
Other DBs
NCBI-GeneID:
104083128
NCBI-ProteinID:
XP_009584804
LinkDB
All DBs
Position
Unknown
AA seq
1266 aa
AA seq
DB search
MEGYPWWPCLIYNHPTERTIVRGKGKSTRVHVQFFDDSPTRGWVSIKYLRPYKGSSDGET
LKGGMFYSTKPEIKRAMVLADDAMSKDKTKRLELAVCSEPSDTEEEEEEEEEEMEQMSES
ASGNSDDCNSEEDVKSNKRVTSRESAIKAKRRRVLDSDSDHDGSDVEFKPDVKEAASSEE
ASSGVDENESTDTETDAESVAESPIKVPSKRKRKEINKPAKRSSLENERSETPKRAATVS
LEAKSKLTSFAAPESFESQANTCSGGISGFAVWEHEKLDWLQEGKKKDAHRKRQGDPNYD
PCTLYVPEDYLNKCTPGMRRWWQLKSQNFDAVIFYKVGKFYELYHMDAVTGVNELGLIFM
KGTWAHSGFPETAFGRFSDVLVQKGYKVARVEQTETPEMMETRYKSMAHPTKFDKVVRRE
ICRIITKGTQTYSVLDCDPSENHNRYLLCVKEKEDSSGQRVYGVCFVDTSVGKFYVGQFS
DDRHCSRFRTLVAHYTPVQVLYEKGNLSVDTQKILKGSLVSCIQEGLISGSQFWNASKTL
KVLLEEGYFKEKQNSENGCSLPSVIKSLTSESDSLGLTPGENSELALSALGGCVFYLKKC
LIDQELLSLANFEEYVPVDIDTAKTTSSGSFFAKTDQRMVLDGVTLMNLEVLQNGTNGTT
EGTLLERIDSCCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKMSEVSEHLKK
LPDLERLLSKIHSIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLSALEGFKVMNEIVDV
MEEIASDFKSKVLKQLVTRKAKNPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKAGFD
PDYDKALQDIKAVEEDLHKYLDKQRKLLGFKSMLYWGAGKNRYQMEIPESAISRNLPEEY
ELKSTRKGYKRYWTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNSKDWQTAVECI
AVLDVLMSLANYSQDGDGPLCRPVILLPVDSAPPFLELKNSRHPCITKTFFGDDFIPNNI
VIGSEDEDSSSEASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAEVCRLTPIDRVF
TRLGASDRIMSGESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVKE
LAEQIKCRTLFSTHYHSLVEDYSHNTAVRLGHMACMVENESEDPSQETITFLYKFIEGAC
PKSYGFNAARLANIPEEVIQKGHRKAKEFEKTTISLRIFRYLCLVVDGAASDAKAVQKLT
AMMDHL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttatccttggtggccgtgtctcatatacaaccatccgactgaaagaacaata
gtcagaggaaaagggaaatccactcgtgtgcatgtacagttttttgatgacagccctacg
aggggctgggtcagtattaaatatctgaggccatataaaggttcatcagatggggagacg
ctgaagggaggtatgttttatagtacaaagcctgaaattaaaagagcaatggtgctagcg
gacgatgcaatgagtaaagataaaactaagcggcttgaactggcagtatgcagtgaacct
tcagacacagaggaggaggaggaggaagaggaggaggaaatggagcagatgagtgaaagt
gcatcaggcaacagtgatgactgcaatagtgaggaggatgtgaagagtaataagcgagta
acgagcagggaaagtgccataaaagccaaaagaagaagagtgttggattctgacagcgat
catgatggctctgacgtagagttcaagcctgatgtgaaagaagccgccagcagcgaggaa
gctagtagtggggtggatgaaaatgaatctactgacacagagacagatgcagagagtgtt
gcagaaagtcccataaaagtcccttctaaacgaaagagaaaagagataaacaagcctgct
aaaaggagtagcttagaaaatgaacgttctgaaacgcccaaaagagcagcaacggtttct
ttagaagccaagtctaagctgacatcgtttgcagcacctgaaagttttgaatctcaagca
aatacttgcagtggaggcatcagtggcttcgcagtatgggaacatgaaaagcttgattgg
ctgcaggaagggaaaaagaaagatgcacacaggaaacggcagggtgaccccaattatgac
ccatgtactctgtatgtacctgaggactatctcaacaagtgtacgccaggaatgcggagg
tggtggcagctgaaaagtcaaaactttgatgctgtgattttctacaaagttggaaaattc
tatgagctgtatcatatggatgcagtcactggtgtaaatgagttgggcctgatctttatg
aaaggtacttgggcccattccggttttccagaaactgcatttggccgattctctgatgtt
ctagtgcagaaaggctacaaggtagcccgtgttgagcaaacagaaactcctgaaatgatg
gaaacgcgctacaagtcaatggctcacccaacaaaatttgacaaggttgtacgccgagaa
atatgcagaatcatcaccaaaggaactcagacgtacagcgttctggactgtgatccctct
gagaaccataacagataccttctgtgtgttaaggaaaaagaagactcctctggacaacgt
gtttatggggtctgctttgttgacacgtcggttgggaagttttatgtaggccagttctca
gatgaccggcactgttcgaggtttaggactttagtagcgcattacactcctgtgcaggta
ctgtatgagaaggggaacctgtctgtggacacgcagaagatactgaagggctcacttgtt
tcttgcattcaggaagggctgatctctggttcccagttctggaatgcatctaaaacacta
aaagtccttcttgaagaaggctatttcaaggagaaacagaactctgaaaatggatgttct
ctgccctctgtaatcaaatctctgacttcagagagtgactcgctgggattaactcctggt
gaaaacagcgaattagctttgtcagctcttgggggatgcgtcttctatctcaaaaaatgt
ctgattgatcaggagctgttatcgctggcaaacttcgaggagtatgtccctgtggatatt
gatactgcaaaaactacaagttcaggtagtttctttgctaaaactgaccagcggatggtg
ctggatggcgtcaccctgatgaacttggaagtcctgcagaacggaaccaatgggaccaca
gaaggtactttgttggaaaggattgattcctgttgtacgccgtttgggaagcgactcctg
aaacagtggctctgcgctccgctttgtaatcctaaatccatcaacgatcgtttagatgct
gttgaggaccttctggcagtgccagataaaatgtctgaagttagtgagcacctgaagaaa
ctccctgaccttgaaaggctgctcagcaaaattcacagtattggatcgccacttaaaagt
cagaaccatcctgacagcagagccatcttttatgaagaaatcaaatacagcaaaaaaaaa
attgctgactttttgtctgcactggaggggtttaaagtaatgaatgaaattgtcgatgtc
atggaagaaattgccagtgacttcaaatccaaagtccttaagcagctagtcacccgcaaa
gccaaaaatccagacggccgcttcccagacttgagtgcagagcttaaaagatgggatact
gcttttgatcataaccaggctcgaaagacaggagtgattactccgaaggcgggttttgac
cccgattatgataaagcactacaggatattaaagctgttgaggaagatcttcacaagtac
ctggataagcaacgcaaactacttggattcaaatccatgctgtactggggggcaggcaaa
aaccgataccaaatggaaataccggaaagtgcaatatcacgtaatttgcctgaggaatat
gagttgaaatcaaccaggaagggatataaacgttactggaccaaggaaatcgagaagatg
ctggccgccatggttaatgctgaagagcgcagagatgcagcactaaaagactgtatgagg
cgtttgttttacaacttcgacaaaaatagcaaagactggcagacagctgtggaatgcatt
gctgtgttagatgtcttgatgtcccttgctaactacagtcaagatggtgatggaccactg
tgccgacctgtaattctactgcctgtggatagtgctcctcccttcctggaacttaaaaat
tcacgccatccatgcattacaaaaactttctttggggatgattttattcctaataacatc
gtgataggcagcgaagatgaagatagcagtagcgaagcctcctgtgtgttagtaactggc
ccaaatatgggtggcaaatctacgctcatgagacaggctggtctcctggttataatggct
caactgggatgctatgtacctgctgaagtttgcaggcttacaccgattgacagagtattt
acgagacttggcgcctcagacagaattatgtcaggtgaaagtaccttcttcgttgaattg
agtgagacctccagcattctccagcatgcaacagagcattcccttgttcttgtggatgaa
ctgggcagaggcacagctacttttgatggaacagctatcgcgagtgcagttgtgaaagaa
cttgcagagcaaatcaagtgtcggactctgttctccacacactaccactcgctggtggag
gattattcgcacaacacggccgtgcggcttggtcacatggcatgtatggttgaaaacgag
agtgaagatccaagccaggaaacgattacgttcctgtataagttcattgaaggagcgtgt
ccaaagagctatggcttcaatgcagcaagacttgctaatattccagaggaagttattcag
aaggggcacagaaaagcaaaagagtttgaaaaaactaccatttcactgagaatatttagg
tatctctgcctggtggtggatggtgctgcaagtgatgcaaaggctgttcagaaacttacc
gctatgatggatcacctttaa
DBGET
integrated database retrieval system
