Fulmarus glacialis (Northern fulmar): 104083941 Help Entry 104083941         CDS       T08370                                  Symbol SETX Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism fga  Fulmarus glacialis (Northern fulmar) Brite KEGG Orthology (KO) [BR:fga00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:fga03021]     104083941 (SETX) Enzymes [BR:fga01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      104083941 (SETX)     5.6.2.5  RNA 5'-3' helicase      104083941 (SETX) Transcription machinery [BR:fga03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      104083941 (SETX) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 AAA_19 AAA_30 Viral_helicase1 AAA_22 UvrD-helicase ResIII AAA_16 nSTAND3 Motif Other DBs NCBI-GeneID:  104083941 NCBI-ProteinID:  XP_009585909 LinkDB All DBs Position Unknown AA seq 2616 aa AA seqDB search MSTCRWCTPSGSDTTEFLKSYASKWLSPEDLEGSNDDLCYCLECVVEYHKAREKLPRLHE VLWELETSRLVAHIEKSMQQEAGEDDELFIVDDNGETQLSGYVGPDFENNLRVPLLEVLK YPYLLLHEKVSELCVEVLCRMEQSHSSFQVFEKYPGIYLFLVHPNEVIRRWAILTARNLG KVDRDDYYDLQEVLTCLFKVIELGLFESPDIYISSMFEKGRLILLPSHLYDTANYKNYWL GICMLLTVLEEQAMDSLLLGPDKQNDFMQSILHTMEKEAADDSTDPFWPALHCFMVILDQ LGSKVWGQLIDPVQAFQTIINSVSYNNEIKNIRSSFKRTKSEPESDYNDDMVTCSQIVYN YNTEKPQKDTGWKTAICPDYCPNMYEDMQKLANVLQSDIGRDMRVHHSTFLWFIPFVQSL MDLKDLGVAYIVEVIHYLCSEIKDIINERIQQCDKISEFFLLILVSIIELHRNKKCLHLL WISSREWVEAVVRCAKLPAIAFTRCTEKASGHSVRGSSAVSLQASNSVQHACVQLIRSLL REGYQIGQHALCKQYLDKLNFLLRGNLSLGWQLNIQETQELQTCLKQVIRSMKDRALNTP VPVGSNANSTTLPTVSIKQEKSARGDGCKMSVHGRDDLCSPFAVVSKEGKDEDHQESPFP RRKSAWEEECRDASKSSRSWTSTEGLLMNIKKEPNDLATQEYVCPQNSLATKVCGKVQEN RNNDLVAGRCDTDNQCFNPNAQSSDFRRGEELETECEAGPMTPIRLAAQTRIGSPEHVYS SDVKESSMSPSSSSKFKVDVHRLTNLKNKLQKTEWPSKLSQPVKPRNLKNCSLVTSASKA EVEQPKFCTGYLCTSKDCHKHQGANTVCENEISLDTPSSRSCGSTQEKSVNSAFQSRLVP AKQVSKETPLDCSSSSKNEPGKQENEDDSILLSGISDTLLKKVSTEEKSSSLLKSKKDTD MQTSDQEQLNLNDLVKYDCKGQISKTLCMDKTSANHHVPSSSENKRDISNAACQIRPLSM KSESSDRLFKFSKYFKRENNSVGKKKEDFVKTVSGDNTLTDSQVDRELSKLSLAAYAKSV NFPFDSSQESSVHHNICDIKRKVKGAVRSSNNGQSTKSPCDANCLDNQVIVISDSSDEEK GVADKEEIKKKNENVCPEKQPSTSSGNSDGDIKIESKKPSSPLSLEDCESQYFEFETEVD VFSVWQDTQAYSTEATQEYKQDHVSRLVDSSDSDGLLNDHTNEWGYDVDYVSEDTMEEEA NFIEKQIENISHQKEADNTKEVTNSALQESISKENAKDQLENFAEKGTVAKDFTLDSKLT EPRASTSNISLASKLALKKNSASPRKNTAKSKVAGTIQRSPKKPPVLKTAQNKKLLQSTS KNSQPGRSMPAVVPPRKVRQCPAPASTVEKLGLKKAPRKAFELSQRSLESLAQLRSYGKA AGRVGLAPKQKIKLIAPQSLSIKHNKKMLACQDRQFLRQTRPKKSVRVKNLAGSSDSRNK VSKVDAKSMKQKPTSFDLASVEGSVENRREKKREETVCPSATEREFESLSVEETCVSKMP SSSDSNRKSEDDSMMVSPVPMDSSLSSAALVGDDKEEPSGKGSVVQPECEKTTPKENGCK PDENTEDDDDLFLTQSDPVDMELCSEEESIQGTTIASKKTEEMDTAESVQQNESSAIVKC KYKDCMEKVEKPGEYCTKHSATSSEADHLFAKPSLLPPSKTRKPSTTKIFSSASSSRNAA FSKDLEDVKKQLPASKSKVNAAKPSVVRPPNVKAVPVGNQTCKSPSFSNVLQPCISNNIL QSQNRQNDNASNISRRPGQEACYSVFLGVQQHDHSIFVNEVLKWTYEMFANSSQFGPPSS LLQSIAASVPVQFQRYNDYFNTFFPLMMLNAFETLAQEWIENQRVRERSYYFYLQNFCAD LNTADFTAHFRESDLARQLHPKEDDLIFLVVQKQKDTFREESEMENQIVNHVGLVTRFSH ASGYLTRQKEQHTTCHLSVQTRGNLSFFIKKQVKCVVVGSLVTTRRTFKGLLLLSRSPLA KPIINPSYNDFCPRDLPVASESAASDVNEYNEDQKRAIETAYAMVKQHPRLPKICLIHGP PGTGKSKTIVGLLSRVLRENTRNEKASQKTNSKIPPNRFLVCAPSNAAVDELMKKIIIAF KEKCQNIQEPLGNCGDIKLVRLGAEKAINSEVRGFSLDKQVEHRMKRRPADCDQDIQKKK EALDQRLDMLSRQRAMHRCEKREIQMLDDEIGRLSKERQQLASQVKEVRGRSQKVQADII LESNIICCTLSTSGGSLLESVVRRRRLDLFDLFSCVIVDEAGQSCEVETLIPLIYRCNKL VLVGDPRQLPPTVKSVKAQEYGYDQSLMARLYRHLEVERNVLRSLPVVQLTVQYRMHPDI CLFPSNYVYGRALKTDKAIEENRCSSEWPFQPYLIFDVRDGREERDNDSFSNPQEVKLVM ELIRTIKEKRKDLSLRHIGIITPYSAQKKKIQEQMDRVFKNNSPGEVDTVDAFQGREKDC IIVTCVRAHSTKGSIGFLASLQRLNVTITRARFSLFILGRLKTLMEQKSFRLYKCALSFA LAAASSVGILFLLQWQHKPQIKAYKVCFVPVSPRDK NT seq 7851 nt NT seq  +upstreamnt  +downstreamnt atgagcacatgtcgatggtgtacacctagtggttctgataccactgagttcctgaagagc tatgcttctaaatggttgtccccggaagatcttgaaggatccaatgatgatctctgttac tgcctggagtgtgtggttgaataccacaaagcaagggaaaaattgccaaggttgcatgag gtcttgtgggagttggaaacctcccgtcttgttgcccacattgagaaatccatgcaacaa gaagctggagaagatgatgagttgtttatagtggatgataatggagagacacagctgtct ggttatgtgggcccggattttgagaataacctgcgagtgcccctcctagaagtactgaaa tatccatatctgctgctgcatgagaaagtcagtgagctgtgtgtagaagtgctctgtaga atggaacaaagtcacagctcctttcaggtctttgagaaatatccaggaatttatctcttt ttggtacacccgaatgaggtgattcgtcgatgggccatcctgacagcaaggaacttgggg aaggttgacagggatgattactatgacttacaggaagtgctgacttgcctttttaaagtt attgagttggggctttttgagagtccagatatttacatctcttcaatgtttgaaaagggt agactcatccttctgccatctcatttgtatgatactgccaactacaagaactattggcta gggatctgtatgttgctgacagtgctggaagaacaagctatggactccttgttactgggc ccagacaaacaaaatgatttcatgcagtctatacttcacaccatggagaaagaagcagct gatgattctactgaccccttctggccagcgctgcattgtttcatggttattttggatcag ctcggatctaaagtatggggtcagcttattgatcctgtccaagcctttcaaaccattatc aacagtgtgagctacaacaatgaaataaaaaatatacgcagtagctttaagaggacaaaa tctgaaccggagtcagactacaatgatgacatggttacttgcagtcagattgtgtataat tataacacagaaaagcctcaaaaggatactggatggaagactgccatttgtccagactac tgccccaacatgtatgaagatatgcaaaaactggctaatgtgcttcagtctgatattggc agagatatgcgtgtccatcacagcacgtttctgtggtttatcccttttgttcagtcgctt atggatctcaaggacttgggtgtagcatatatagtagaggtcattcactacctctgctcg gaaatcaaagatattatcaatgaaagaatccagcagtgtgacaaaatctcagaatttttt ctcctgatcttggtgtccattattgaactacacagaaataaaaaatgcctgcatttgcta tggattagctcccgagaatgggtagaagcagtggtgagatgtgctaagcttccagctata gcatttacacggtgcactgaaaaagcatctggacactctgtgagaggttcatcagcagta tctttacaagcttctaactctgtgcagcacgcctgtgtacagttgatacgcagccttctt agagaaggctatcaaattgggcagcatgctctttgcaagcaatacctagacaaactcaat tttcttctgcgaggaaatctctctttaggttggcagctgaacatccaggaaacccaggaa ttacagacgtgtttaaagcaagttataagaagtatgaaggacagagcattgaatacccct gtgcctgtaggaagcaatgcaaactctacaactttgcctaccgtttctataaagcaagag aagagtgcacgtggtgatggatgcaagatgagtgtacatggcagagatgacctttgttca ccatttgctgtcgtatcgaaggaaggcaaagatgaagatcatcaagagagccctttccct agaagaaagagtgcctgggaagaggaatgtagagatgcatctaaaagttcaagatcttgg acatccacagaaggcctcttgatgaatattaaaaaggaacctaatgacttggcaactcag gaatatgtctgcccacagaactctttggcaacaaaagtatgtgggaaagttcaggaaaat aggaacaatgatcttgtggcaggaagatgcgatacggataatcagtgctttaatccaaat gcccagtcttcagatttcagaagaggcgaagagctggaaaccgaatgtgaagcaggaccc atgacaccaatacgtctggctgctcaaactcgtattggttctccagaacatgtttacagc tcggatgtaaaggaaagcagtatgtctcccagttcttcttcaaagtttaaagtagatgtg catagacttacaaatttgaaaaacaagctacagaaaactgaatggccctcaaagctatca cagccagtgaagccacgcaacttgaaaaactgcagtttagtaacaagtgcttcaaaagca gaggtagagcaacctaagttttgcactggctatctgtgtacaagcaaagattgtcataaa catcagggagcgaatactgtgtgtgaaaatgaaatctctcttgatactccatcttcaagg agttgtggaagtacacaagagaaaagtgtcaatagtgcttttcaatccagactggtcccc gctaaacaggtatcaaaagaaacaccactagattgctctagctcctctaaaaatgaaccc ggtaaacaggaaaatgaagatgacagtattttgctttcagggattagtgacaccttactg aaaaaagtatccactgaagaaaaatcaagttcattgttgaagtctaagaaagatactgac atgcaaacttcagaccaggaacagcttaatttaaatgacttggttaaatatgactgtaaa ggtcaaatttcaaagacactttgtatggataaaacttcagcaaatcatcatgttccctct agctctgaaaacaagagggatatatccaatgctgcttgtcagatcagaccactgtcaatg aagagtgaatcaagtgacaggttgttcaagttttcaaaatatttcaagagagaaaacaat tcagtggggaagaaaaaggaggattttgtgaagacggtttctggagataatactttaaca gactcccaggttgatagagaactcagtaaattatctttagctgcgtatgccaaaagtgtc aattttccctttgactcaagccaagaaagctcagtacatcataatatatgtgatattaaa aggaaagtgaaaggtgctgtaagatcttccaataatggccaaagtaccaagtctccctgt gatgcaaattgccttgacaatcaagtcattgtaatttcagactcttctgatgaagaaaaa ggcgtggctgacaaggaggaaataaaaaaaaagaatgaaaatgtgtgtcctgaaaagcag ccttcaacttctagcggtaattctgatggtgatatcaaaatagaatcaaagaagccaagc tctcccttgtcactggaagactgtgagtctcagtactttgaatttgaaacagaagttgat gtcttttcggtatggcaagatacgcaagcgtatagtacagaagcaactcaagagtataaa caagatcatgtttcaagattggttgatagtagtgattcagatggcttactgaacgatcac acaaatgaatggggatatgatgtggattacgtaagtgaagataccatggaagaagaagca aactttatagaaaagcagatagaaaatatttctcatcagaaagaagctgataatacaaaa gaagtaactaattcagcattgcaagaatctattagtaaggaaaatgcaaaagatcaactg gagaattttgcagaaaaaggtactgttgctaaagacttcaccctggactcaaaattgact gaacccagagcatctacatctaacatctcattagcttcaaagttggcccttaagaaaaat agcgcgagcccacggaagaatacagcaaaatctaaggtagcaggaactattcaaagaagt cctaaaaaacctcctgttcttaaaacagcacaaaataaaaaattacttcaaagtacatca aaaaattctcaacctggcaggtcaatgcctgctgtggttcctccaaggaaagttcggcag tgtcctgcaccagcatcaactgtagaaaaacttggtctgaagaaggcaccgcgcaaagca tttgaattatcccagcgctctttagagagtctagcgcaattgcgcagctatggtaaagct gcagggagagttggactggcaccgaaacagaagattaaactaattgctcctcagagtttg tctataaaacataataaaaaaatgctagcctgccaagaccgtcagtttttaaggcagaca aggcccaaaaaaagcgtcagagtgaaaaatcttgcaggaagttctgatagtagaaacaaa gttagcaaagtggatgcaaaatctatgaaacaaaagcctacaagttttgatctggcatct gttgaaggatctgttgaaaaccgaagagagaaaaaaagggaagagactgtttgtccctct gccacagagagagaatttgaaagcctatctgtggaggagacatgtgtctctaaaatgcct agttcttcagactcaaacagaaaatcagaggatgacagtatgatggtttctcctgtacct atggattcaagtctctcttctgctgcacttgttggagatgataaagaagaaccttcagga aaaggttctgttgtccagcctgaatgtgagaagacaactccaaaagaaaatgggtgtaaa ccagatgaaaacactgaagatgacgatgacctgtttttaactcagtcagatcctgtggat atggaattatgttccgaggaggaaagtattcaaggtactactatagctagtaaaaaaaca gaggaaatggatactgctgaaagtgttcaacagaatgaatcctcggctattgtgaaatgt aagtacaaagactgtatggaaaaagtggaaaaaccaggagagtactgtactaagcattca gccaccagctcagaagcagatcacttgtttgccaaaccttctctcctgccaccttctaaa acaagaaagccttccactaccaaaatttttagctcagcaagttcttcacggaacgcagcc ttcagcaaggatctcgaagatgttaaaaagcagctgccagcttcaaaaagcaaagtgaat gcagcgaaaccgtcggtggtcaggccaccaaatgtgaaggctgtaccagtaggaaatcaa acatgcaagtctccaagtttcagtaatgtacttcaaccctgtatttctaataacattctt cagtcacaaaatagacagaacgacaatgcttcaaatatttccagaaggcctggccaagaa gcatgttattctgtctttcttggtgtgcagcagcatgatcatagtatttttgttaatgaa gtcctaaagtggacttacgaaatgtttgcaaactccagccagtttggacctccaagtagt ctactgcagtctatagcagcctctgttcctgtccaatttcagcgatacaatgactatttt aatacatttttccccttgatgatgctaaatgcctttgaaacactggcacaagagtggata gaaaaccagagagtaagagagaggagttactacttctatttacagaacttctgtgctgac ttgaatacagcagattttacagctcattttcgagaaagtgatttggcaaggcagcttcat ccaaaggaggatgacttaatctttttggtggtccaaaagcaaaaagacacctttagggaa gaaagtgagatggagaaccagatagtgaatcacgttggtcttgtgacacgattttctcat gcatctggctatttaactagacaaaaggagcagcataccacctgtcatctttctgtgcaa actcgaggcaatttgtcattcttcataaaaaagcaagtgaagtgtgtggtggttggctcc ctggtgaccacacgccgaacattcaaaggtctactgctcttgagcaggagtcccctggct aaacccatcataaatccaagttacaatgacttctgtcccagagatttgcctgtagcttca gaaagtgctgcatcggatgtgaacgaatacaatgaagatcaaaagagagccattgagaca gcttatgccatggtaaagcaacatccaaggcttcccaagatctgcctcatccacggacca cctggaacagggaaatcaaaaactattgttggacttctttctcgtgttttgagagaaaac actaggaatgagaaagcaagtcaaaaaacaaattccaagatcccgccaaaccgttttcta gtttgtgcaccatcaaatgctgctgttgatgaactcatgaaaaagatcatcattgcgttt aaggaaaaatgccaaaacatacaggagcctttaggaaattgtggtgatatcaaattagtg cgacttggggctgaaaaagcaatcaacagtgaagtccggggatttagcctggataagcaa gttgaacatagaatgaaacgaaggccagctgactgtgaccaggatattcagaagaaaaaa gaagctctggatcaacggctggacatgctgtctcgtcagcgtgccatgcacagatgtgag aagagggagattcaaatgttagatgatgaaattggcagactttcaaaggagagacaacag cttgcttctcaagtaaaggaggttcgggggcgctctcagaaagtacaggcggatatcatc ttggagtctaacatcatctgctgcacactgagcacaagtggaggaagtctgctggaatct gttgttcggcggcgaagacttgatctttttgatcttttcagctgtgtcattgtggatgag gcagggcagtcctgtgaggttgaaacactgattcctctgatctatcgctgtaataaactt gtccttgttggagatcccagacagctccctcctactgtaaaatcagtaaaagctcaggaa tatggctacgatcagtccttgatggcacgcctgtacagacacctggaggtggagaggaat gttttacgaagcttgccagttgtgcagctcactgtgcagtacaggatgcaccctgacatc tgcctcttcccgtccaattatgtttatggcagggctctgaagactgacaaggcaatagaa gagaacagatgttcttcagagtggccattccagccctaccttatttttgatgtaagagat ggtcgtgaagagcgagacaatgactcttttagtaatcctcaggaagtgaagctggtgatg gaattaattagaacaattaaagaaaaaaggaaggatctcagtcttcgtcacattggaata attaccccttacagcgcacagaaaaagaaaattcaagaacaaatggacagagtgtttaag aataacagcccaggagaagtggacacagtggatgcattccagggacgagagaaagactgc atcatagtgacgtgcgtccgggcacacagcactaaagggtcaattgggtttctggcaagt cttcagcgtctgaacgttacaattacccgagccagattcagcctcttcatccttggaaga ctgaaaacgctcatggaacagaagagctttcgtttatacaaatgtgccttgagttttgct cttgctgctgcttcatcagttggaatccttttcttgttgcagtggcaacacaaaccacag attaaagcctacaaggtctgtttcgtcccagtgagtccacgtgacaaataa

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