Fulmarus glacialis (Northern fulmar): 104084127
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Entry
104084127 CDS
T08370
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104084127 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fga03400
]
104084127 (MSH2)
DNA repair and recombination proteins [BR:
fga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104084127 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
104084127
NCBI-ProteinID:
XP_009586151
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
TQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSKSIKENDWYLAYKGSPGNLAQF
EEVLFANNDMSTAIGVVGVKLSTTDGQRVVGVGYVDTTLRKLSVCEFPDNDQFSNLEALL
VQLGPKECVLPGGETAGEMGKLRQVIQRGGILITDRKKADFTTKDIVQDLNRLLKSKKEE
QMNSAALPEMEKQVAVSSLSAIIKFLELLSDESNFGQFELTTFDLSQYMVLDNAAVQALN
LFQSSVENANTAQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVVDPE
LRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRMYQAINQLPNVVQALEKHEGAHQML
LLAVFITPLNDIYSDFSKFLEMIETTLDMDKVENHEFLVKASFDPNLTELREKMNELEEK
MQSFLKSAAKELGLEAGKSIKLETNSQFGHHFRITCKEEKVLRNNSRYGIVDTQKNGVKF
TNSKLSSVNDEYIKNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVIAQLDAIVSFAHV
SNGAPVPYVRPVILEKGQGRIVLKGARHPCIEVQDEVAFIPNDITFEKGKQMFHIITGPN
MGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILARVGAGDSQLKGVSTFMAEMLE
TASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKICAFCMFATHFHELTALA
DQVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFPKHVIESAREKALEL
EEFQNIGKSQESEGEPPAKKLYREREEGEKIIQDFLCQVKALPLTDMSEEDIKIKLKQLR
NDVLAKNNSFVNEIISRTKVTS
NT seq
2591 nt
NT seq
+upstream
nt +downstream
nt
gaactcagaagcttgaaagtgttgtgcttagtaaaatgaactttgaatcgtttgtgagag
atctgcttctggttcgtcattacagagttgaagtttacaagaacaaagcagggagtaaat
ctatcaaagaaaatgactggtatttagcatacaagggttctccaggaaatcttgcccagt
ttgaggaagttctctttgccaacaatgatatgtcaacggccattggggttgtgggggtta
agctgtctactactgatggacaaagagtagtaggagtggggtatgtcgacactacgctga
gaaaattgagtgtctgtgagtttccagataatgatcagttctcaaaccttgaagctctac
tggttcaactaggaccgaaggagtgtgtgctaccaggaggagagactgcaggagagatgg
gaaaactacgacaagtcattcagaggggaggaatcctgattacagacaggaagaaggcgg
atttcacaacgaaagatattgttcaggatcttaatcgcttgttaaaatcaaaaaaagaag
aacaaatgaatagtgcagcattgccagagatggaaaagcaggttgctgtttcgtctttgt
cagccattatcaagtttctagagttgctgtcagatgaatctaattttggacaatttgaac
tgactacttttgatcttagtcaatatatggttctagataatgcagctgttcaagccctca
acctttttcagagttctgtggaaaatgctaatactgcacagtctctagctggtttactaa
ataaatgcagaacccctcaaggacaaagactagttaatcagtggatcaaacaaccactta
tggacaagaatagaattgaagaaaggttgaatttggttgaagcttttgtggtggatccag
aactacgtcagtgccttcaagaagatctcttacgtcgcttcccagatcttaaccgactgg
caaagaaatttcagagacaagcagcaaacttacaggactgttaccgaatgtatcaggcta
ttaatcaactgcctaatgttgtacaagcactagaaaagcatgaaggagctcaccagatgt
tgttgttggcagtgtttataacacctcttaatgatatctactctgacttctcaaagtttc
tggagatgatagaaacaacattggacatggataaggtggagaatcatgaatttcttgtca
aggcttcttttgatcctaatttgacagaattaagagagaagatgaatgaactggaagaaa
aaatgcagtcctttttaaagagcgcagccaaagaactaggtttggaagctgggaaaagta
tcaaactggagacaaattcgcagtttggacatcacttccgaataacttgcaaggaggaaa
aagttctccgtaacaattcaagatatggaatagttgatacacagaagaatggtgtgaaat
ttactaacagcaaactgagctccgtcaatgacgaatatataaagaacagagaagagtatg
aagaggctcaggatgcgattgttaaggaaatcattaacattgcttcaggttatgcagaac
cgatacagacgatgaatgatgtgatagctcaattagatgcaattgtcagttttgctcatg
tgtcaaacggagcaccagtgccgtatgtccgtcctgtcattctggaaaagggacaaggaa
ggattgtgctgaaaggtgccaggcatccttgcatcgaagtgcaagatgaggtggccttca
tccccaatgacattacatttgagaagggcaagcagatgttccacattattactggcccta
acatggggggaaaatcaacctacatccgacagacaggggtgattgttcttatggcccaaa
ttgggtgttttgtaccatgcgactctgcagaaataaccattgtggattgtatcctggctc
gggtgggagctggagacagtcagctgaaaggtgtgtctactttcatggctgaaatgttag
aaactgcttcaatccttaggacagcatctgaaaactccctgataatcattgatgagctgg
gaagaggaacttctacctacgatggctttggcttagcatgggcgatttcagaatacattg
ctagcaaaatctgtgctttctgtatgtttgctacacattttcatgaactgacagctcttg
ctgatcaagtgccaacagtaaataacctacatgttaccgctctgaccagcgatgacacac
tgacgatgctttatcgtgtcaaggaaggtgtttgtgaccagagttttggaatacatgtag
cagagttggcggctttcccaaaacatgtgatagaaagtgcaagagagaaagcattggagc
tggaggagtttcaaaacattggcaagtcccaggaatctgaaggagaaccaccagccaaga
aattgtacagagaaagagaggaaggtgaaaagataattcaggattttctttgtcaagtga
aagcattgcccctgacagatatgtcagaagaagacatcaaaatcaagctgaaacagctga
gaaatgatgtgttggcaaagaacaacagttttgtgaatgaaatcatttcccgaacgaaag
ttacatcataa
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