Fulmarus glacialis (Northern fulmar): 104084345
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Entry
104084345 CDS
T08370
Name
(RefSeq) LOW QUALITY PROTEIN: embryonic polyadenylate-binding protein-like
KO
K13126
polyadenylate-binding protein
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03015
mRNA surveillance pathway
fga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104084345
09123 Folding, sorting and degradation
03018 RNA degradation
104084345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fga03019
]
104084345
03041 Spliceosome [BR:
fga03041
]
104084345
Messenger RNA biogenesis [BR:
fga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104084345
mRNA cycle factors
Stress granule specific factors
104084345
Spliceosome [BR:
fga03041
]
Complex C
Other components
Complex C specific factors
104084345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RBD_DEAH11
RRM_3
RRM_RdRP1_2
DUF6262
ATP-grasp_2
Motif
Other DBs
NCBI-GeneID:
104084345
NCBI-ProteinID:
XP_009586443
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MNASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGLGNIFIKNLDDSIDNKALYDTFS
AFGNILSCKVVCDENGSRGYGFVHFETHEAATRAIETMNGMLLNDRKVFVGHFKSRKERE
AEFGARAMEFTNVYIKNFGDDMDDDRLREIFSKFGKTLSVKVMMDNTGRSKGFGFVNFEK
HEEAQKAVADMNGKEINGRMVYVGRAQKRWGALERQSELKRKFEQIKQERVSRYQGVNLY
VKNLDDGIDDERLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTERNGII
VGPKPLYVALAQRKEERKAILTNQYMQRLATMRALPGPLLGSFQPPPGYFLPPIPQVSPS
TFYSPSPVVPVRPATRWSAQPSRPPPYPAATPILRAAAPPRRLLSNISTMRQASTQVPRV
PPQAQRVANIGTQTVSARVPSSPTLPRGAPQYKYSSALRNIQSMGSSLFFLQVGEPAVHV
QGQEPLTASMLAAAPPQEQKQMIGERLYPLIHTMHPSLAGKITGMLLEIDNSELLLLLES
PDSLRSKIEEAVAVLQAHQATETSHKSSAAAFLQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctagcggccctggctatccgttagcctctctctacgtgggagacctccaccca
gacgtgaccgaagccatgctctatgagaagttttcgcctgctgggcccatcatgtccatc
cgagtctgtcgggacgttgccacgcgccgatcgctgggctatgcctacataaacttccag
cagcctgcggatgctgagcgagccctggacaccatgaactttgaagtgatcaaaggccgt
cccatccgcatcatgtggtcccagcgggaccccgggctccggaagtcggggcttggaaac
atcttcatcaagaacctggatgactccattgacaacaaagccttgtacgacacgttctcc
gccttcggaaacatcctgtcgtgcaaggtggtttgtgatgaaaatggatcccgtggctat
ggctttgttcactttgagactcacgaggcagcgactcgggccatcgagaccatgaatggg
atgttgctcaacgaccggaaggtgtttgttggccatttcaaatcccgcaaagagcgtgag
gcagagtttggcgctcgggcgatggagttcaccaacgtctacatcaaaaactttggggat
gacatggatgatgatagactgcgggaaatattctccaagtttggaaagacgctaagtgtc
aaagtcatgatggacaacactggccgctcgaagggctttggatttgtcaacttcgagaag
catgaagaagcccaaaaggcggtggccgacatgaacgggaaggagatcaacgggcggatg
gtgtacgtgggccgagcccagaagcggtggggcgccctggagcgccagagcgagctgaag
cggaaatttgagcagatcaagcaggagcgagtgagcaggtaccagggggtcaacctgtat
gtgaagaacctggatgatgggatagacgacgagaggctgaggaaggagttctctccctac
ggcaccatcaccagcgccaaggtgatgacagagggtggccacagcaaagggtttgggttt
gtatgtttttcctccccagaagaggctaccaaggcggtgacagaaaggaacgggattatc
gtcggccccaagcctctctacgtcgcgctcgctcaaaggaaagaggagcggaaagcaatc
ctcaccaaccagtacatgcagagattagccaccatgagggctctgcccggccctctcctg
ggctccttccagccccccccggggtacttcctaccccccattccccaggtgagtccctct
accttctacagccccagcccagttgtcccagtccgtcctgccactcgctggagtgcgcag
ccctcccggcctcccccatatcctgcagctacccccatcctgagggctgccgcgccgccc
cggcgcctgctgtccaacatcagcaccatgagacaggcctccacccaggtgccgcgcgtg
cccccccaggcccagagagtggccaacatcgggacgcagacggtcagcgctcgggtgcct
tcctcgcccaccctgccacggggtgccccacagtacaagtactcctcggccctcaggaac
atccagtcgatgggctcttctctgttttttctccaggtgggagaacctgctgtgcatgtc
caggggcaggagccactgacagcatccatgcttgcagcagcccctcctcaggagcagaag
caaatgataggtgagcgcctctaccctctgatccacacgatgcatccctcgctggccgga
aagatcactgggatgctgctggagatagacaactctgagctgctgctgctcctggagtcc
cccgactccctgcgctccaagattgaggaagcggttgctgttctccaagcgcaccaggct
actgagacgtcgcacaaaagcagtgctgcggcgttcctgcagtga
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