Flavobacterium galactosidilyticum: LNP27_00235
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Entry
LNP27_00235 CDS
T10182
Symbol
gatB_aspS
Name
(GenBank) bifunctional amidotransferase subunit GatB/aspartate--tRNA ligase AspS
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
fgc Flavobacterium galactosidilyticum
Pathway
fgc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fgc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LNP27_00235 (gatB_aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fgc01007
]
LNP27_00235 (gatB_aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fgc03016
]
LNP27_00235 (gatB_aspS)
03029 Mitochondrial biogenesis [BR:
fgc03029
]
LNP27_00235 (gatB_aspS)
Enzymes [BR:
fgc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LNP27_00235 (gatB_aspS)
Amino acid related enzymes [BR:
fgc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LNP27_00235 (gatB_aspS)
Transfer RNA biogenesis [BR:
fgc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LNP27_00235 (gatB_aspS)
Prokaryotic type
Other AARSs
LNP27_00235 (gatB_aspS)
Mitochondrial biogenesis [BR:
fgc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LNP27_00235 (gatB_aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GatB_N
GAD
GatB_Yqey
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
UFH46498
LinkDB
All DBs
Position
complement(61265..64606)
Genome browser
AA seq
1113 aa
AA seq
DB search
MELEQLTSALKAHDLELVIGLETHVRLNTKTKLFCSCPNQEIETPNQNICSVCTGQMGVL
PALNKEAITKAIYFGKAVESSFSNEIISWDRKHYEYPDNPKNIQITQFHNPIIPDGQVSC
YRNDGSQFTVNLTQVHIEEDAAKLMHEKKISLVDFNKAGVPLIEIVTEPCVRNIEDASTY
AQYIQRIVQNLGISEANLEKGEFKSDVSVSLRKINSDVLNPRTEIKNLNSFKFMIEALKE
EVEKQFNYFIENKEFRPDQTTVLWDADLKQTKVMRKKEFEADYRFISEPDLPFVNIKAEI
EAIKVDTSALPYAVESILINGGVLPQDAKFFTADALRSRTFVTLNNKINDPSFVAKTLSN
NVKAEDYVKIHNIEHLETIFVLFKAEKITAVLVQNAIAGYLQDQNFDYNKYFSDNTISED
KIQEVIAKVISENEEVANDIKAGDQGKAGILVGKVLGIIGKGANGKVIRQIILDGLAVGT
SRDLSVPFSEENPDLSVAISEEKVIQEESLPEIPIIIKDTYRTHKISQLSEESIKEEVML
SGWVASVRDHGDLMFIDLRDSSYEIFQVRISRESFPNIDELVKLKPESVISVTGIVVGRN
VDDYNAGLRTGKIELETSDLEILNLSKTLPFEIKRAAKTNEAIRFQYKFLDHRNEEVRRA
IVNRHKVIKLLRDILDEEEFLEIETPILSAGTDEGAREFIVPTRKGSGLFYTLPQAPQQF
KQMLMVSGYEKYFQIARCFRDEDSRGDRQPEFTQLDIEMAYASMQQIIDLNTKMFNEVVT
KIYGKKWILHPFELITYKDAMDFYGCDRPDLRYGLKMQDITDIVKETTFQVFSKPIEEGG
IVKCIKVSAQEQGNKRLSKGQIENLTAIAQQNGLGGLAYIIVNEDELQSPIIKFLGEEIA
VGIINATNAQVGDIVFFSAADYATANKALDAVRQEMGRMLNLINPKELRPAWVVDFPMFE
RTDEGRWTFTHNPFSMPAIYDLQKHMNGNDEEIGTIIAQQYDIILNGYEIGGGSVRAHKS
EILEATYRNMGYNKEEMMKSVGTMHKAFQYGAPPHGGIAWGIDRLMMILEKKASIREVMA
FPKTGSSEDLLFGAPSLLSDKKVEEMNVRIMRK
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggaattggagcaattaacatcggcattaaaagcccacgatttagaattggtaatcgga
ctggaaactcacgttcgattgaataccaaaaccaagttgttttgttcttgtcccaatcaa
gaaatagaaacacctaaccaaaatatatgttcggtttgtactggacaaatgggggttttg
cctgccttgaataaagaagcgattaccaaagcgatttattttggaaaagcggtagaatca
tcatttagtaatgaaattatctcttgggatagaaagcattacgaatacccagataatcca
aaaaatattcagataacgcaatttcacaatccaataattcctgacggacaagtttcttgt
tatagaaatgacggttctcaatttactgtgaatttaacgcaagttcatattgaggaagat
gctgccaaattgatgcacgaaaagaaaatttcgttagtcgattttaacaaagctggtgtt
ccattgatcgaaattgttacagaaccttgtgttcgtaatatagaagatgcttcgacttac
gcacaatacattcaacgtattgttcaaaatctaggaatttctgaagcgaatttggaaaaa
ggagaattcaaatcggatgtttcggtttctttacgcaaaataaattcagatgttttaaat
ccaaggacagaaatcaaaaacttgaattcgtttaagtttatgattgaagctttgaaagaa
gaagtagagaagcagttcaattattttatcgaaaacaaagagtttagacctgatcaaact
acggttttatgggatgctgatttgaagcaaaccaaagtaatgcgtaaaaaagaattcgaa
gcggattaccgttttatttcggaacccgatttgcctttcgtaaatattaaagcagagatt
gaagcgattaaagtagatacaagtgctttgccttatgcggtggaatctattttgattaac
ggaggtgtcttgccccaagatgctaagttttttactgcagatgcgttgcgttctagaacg
tttgtgactttgaataacaaaattaacgatccttcttttgttgctaaaactttgtctaat
aatgttaaggcagaagactacgttaaaattcataatattgagcatttagaaaccattttt
gttttgtttaaagcagaaaaaataacggcagttttagttcaaaatgcgattgcaggttat
ttacaagatcaaaattttgattacaacaaatacttctcagataacacgatttcagaagat
aaaatccaagaagttattgcaaaagtaatttcagaaaatgaggaggtagccaatgatatt
aaagcaggtgaccaaggaaaagcgggtattttagttgggaaggttttaggaattattgga
aaaggagcaaacggaaaagtaattcgtcaaattattttagatggattagctgtagggaca
agtcgcgacttgtctgtaccattttcggaagaaaatcccgatttgtccgtggcaatttcg
gaagaaaaggtaattcaagaagaaagtcttcctgaaattccaattattataaaagatacg
tatagaacgcataagatttcgcagttgtcagaagaaagcatcaaagaagaagtgatgttg
tcgggttgggttgcaagtgttcgtgatcatggagatttgatgtttatcgatttgcgtgat
tcgagttacgaaattttccaagttcgtatcagtagagagtcatttcctaatatcgatgag
ttagtgaaattgaaaccagaatcggttatttcggtaacaggtattgtggttggtcgtaat
gtagacgattataatgcaggtttacgtacgggtaaaattgaattagaaacttctgattta
gaaattttaaatttatctaaaactttgccttttgaaattaaaagagcagcaaaaacaaat
gaagcaattcgttttcaatacaagtttttagatcatagaaacgaagaggtaagaagagcg
attgtaaaccgtcataaagtaattaagttattgcgtgatattttagatgaagaagaattt
ctagaaattgaaacaccaattttgagtgcaggaaccgatgaaggagcacgtgaatttatt
gttcctactcgtaaaggttcaggcttattttacacgcttccacaagcgccacaacagttc
aaacaaatgttgatggtaagtggttacgagaaatatttccaaattgcgcgttgttttaga
gatgaagattctcgtggggatcgtcagcctgaatttacacaattggatattgaaatggcg
tatgcgagtatgcagcaaattattgatttgaatactaaaatgttcaatgaagtagtgaca
aaaatatatggtaaaaaatggattttgcatccgtttgaattgattacctataaagatgca
atggatttttacggttgcgacagacctgatttacgttatggtctgaagatgcaagacatc
accgatattgtaaaagaaacgactttccaagtttttagtaagccaattgaagaaggtgga
attgtaaaatgtatcaaagtttcggctcaagagcaaggaaacaaacgtttgtctaaaggt
caaatcgaaaatcttaccgctattgcgcaacagaacggtttgggtggattggcttatatt
attgtaaatgaagacgaattgcaatcacctattattaagtttttaggtgaggaaatagct
gtgggaatcattaatgcgactaatgctcaagttggggatattgtattcttctcagcggct
gattatgcaacggctaacaaagcgttggatgcggttcgtcaagaaatgggtagaatgctg
aacttgatcaatccgaaggaattgcgaccggcttgggtagttgattttccaatgtttgaa
agaacagatgaaggaagatggacatttacacacaatcctttctctatgcctgctatttat
gatttacaaaaacatatgaatggtaatgatgaagaaattggaactatcattgcacagcaa
tatgatattatcttaaatggttatgaaattggtggaggatcggttcgtgcacacaaatca
gaaattctagaagcgacttatagaaatatgggttacaacaaagaagaaatgatgaaaagt
gtcggaacgatgcataaagcgtttcaatacggagcaccaccacacggaggaattgcctgg
ggaattgaccgtttgatgatgattttggagaaaaaagcatcgattcgtgaagttatggct
ttcccaaagacaggatcgagcgaagatttattatttggcgcaccatctcttttatcagat
aaaaaagtggaggaaatgaatgtgaggattatgaggaaatag
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