Flavobacterium galactosidilyticum: LNP27_00485
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Entry
LNP27_00485 CDS
T10182
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
fgc Flavobacterium galactosidilyticum
Pathway
fgc00300
Lysine biosynthesis
fgc00470
D-Amino acid metabolism
fgc01100
Metabolic pathways
fgc01110
Biosynthesis of secondary metabolites
fgc01120
Microbial metabolism in diverse environments
fgc01230
Biosynthesis of amino acids
Module
fgc_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fgc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LNP27_00485 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LNP27_00485 (dapF)
Enzymes [BR:
fgc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LNP27_00485 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
UFH46545
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All DBs
Position
complement(116237..117019)
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AA seq
260 aa
AA seq
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MQLEFYKYQGTGNDFVMIDNRSEFFPKENIDLIARLCDRRFGIGGDGLILLENNKETDFK
MVYYNSDGNQSSMCGNGGRCLVAFAKKLGVIENHTTFIATDGLHHATISDDGLVALQMID
VTDVQVNPDFVFMNTGSPHHVQIVDDLENYNIKENGARIRYGDLYGKAGSNVNFVKQIDS
HTFSLRTYERGVEDETLSCGTGATAVAIAMNVLGKTDASSVNLNVEGGKLIVSFDRDDNI
FTQVTLKGPAEFVFKGTIEI
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcaattagaattttataaataccaaggtacaggaaatgattttgtaatgattgataat
cgttcggaatttttcccaaaagagaatattgatttgatagcgcgcttatgtgatagacgt
tttggtataggtggtgatggattaattttattagaaaacaataaggaaaccgattttaaa
atggtttattataactctgatggaaatcaaagttctatgtgtggcaacggaggtagatgt
ttagtggcttttgctaaaaaattaggagtaattgaaaatcatactacttttattgcaacg
gatggtttacatcacgcaactatcagtgatgacggattagttgctttgcaaatgatagat
gttacagatgtacaagtaaatccagattttgtttttatgaatacaggttcacctcatcat
gtacaaatagttgatgatctcgaaaattacaatatcaaggaaaatggagcccgaattaga
tatggtgacttgtatggaaaagcgggaagtaacgttaattttgtgaaacaaattgactca
catacgttctctttgcgaacctatgaaagaggcgtggaggatgaaacgctttcttgtgga
acaggtgctacagctgttgccattgcgatgaatgtcctaggaaagacggatgcttcttcg
gtaaatttgaatgttgaaggcggtaaactgatcgtttcttttgacagagatgataacatt
tttacgcaagtaaccttaaaaggtcctgccgaatttgtttttaaaggaactattgagatt
taa
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