Flavobacterium galactosidilyticum: LNP27_06730
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Entry
LNP27_06730 CDS
T10182
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fgc Flavobacterium galactosidilyticum
Pathway
fgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LNP27_06730 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgc03019
]
LNP27_06730 (groL)
03110 Chaperones and folding catalysts [BR:
fgc03110
]
LNP27_06730 (groL)
03029 Mitochondrial biogenesis [BR:
fgc03029
]
LNP27_06730 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fgc04147
]
LNP27_06730 (groL)
Enzymes [BR:
fgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LNP27_06730 (groL)
Messenger RNA biogenesis [BR:
fgc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LNP27_06730 (groL)
Chaperones and folding catalysts [BR:
fgc03110
]
Heat shock proteins
HSP60 / Chaperonin
LNP27_06730 (groL)
Mitochondrial biogenesis [BR:
fgc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LNP27_06730 (groL)
Exosome [BR:
fgc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LNP27_06730 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LNP27_06730 (groL)
Exosomal proteins of breast cancer cells
LNP27_06730 (groL)
Exosomal proteins of colorectal cancer cells
LNP27_06730 (groL)
Exosomal proteins of bladder cancer cells
LNP27_06730 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
NNH2
Motif
Other DBs
NCBI-ProteinID:
UFH47724
LinkDB
All DBs
Position
complement(1547272..1548900)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIIGKSFGGPNVTKDGVTVAKEIE
LKDPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVEAIVADLAKQAKVVGSDSEKIKQIASISANNDEVIGELIATAFAKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTNSEKMEVELESPYILLYDKKVSSLKELLPVLEPV
AQSGKPLLIIAEDVDGEALSTLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGYTLENTTLEMLGTAKKVTIDKDNTTIVSGAGEADMIKNRVNQIKGQMEATTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL
RAKNALSTITPDNADEATGIQIVSRAVESPLRTIVENAGLEGSVVVAKVAEGTGDFGYNA
KTDEYVDMLKAGIIDPKKVTRVALENAASVAGMILTTECALIDIKEDNGGGNPMGGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatattgaagcacgtgacggattaaaacgtggtgttgac
gcattagcaaatgcagtaaaagtaactcttggaccaaaaggtcgtaatgtaattattgga
aaatcttttggtggaccaaatgttactaaagatggtgttactgttgcaaaagaaattgaa
ttgaaagatccattagaaaatatgggtgctcaaatggttaaagaagtggcgagcaaaacc
aatgatttagccggagacggaacaacaactgctacagtattagctcaagctatcgtaaaa
gaaggcttgaaaaacgttgcagctggtgcaaaccctatggacttgaaacgcggtattgac
aaagcggttgaggctattgttgctgacctagctaagcaagctaaagtagtaggaagcgac
tctgaaaaaatcaagcaaattgcttctatttctgctaataatgacgaagtaattggtgag
ttaatcgctactgctttcgcaaaagttggaaaagaaggtgtgatcactgttgaagaggca
aaaggaactgatacttatgtagatgttgtggaaggaatgcaatttgacagaggatatctt
tctccatattttgttaccaattcagaaaaaatggaagtagaattggaaagtccttacatc
cttttgtatgacaaaaaagtatcttctttaaaagaattattaccagttttggaaccagtt
gcacaatctggaaagccattattaattattgctgaagatgttgatggcgaagcactttct
acattagtggtaaataaattacgtggtgccttgaaaatcgctgctgtaaaagcacctggt
tttggagacagaagaaaagcgatgcttgaagatattgctatcttaactggtggaactgta
atttctgaagaaagaggttatacccttgaaaacaccactttagaaatgttaggaactgct
aagaaagtaactatcgataaagacaacactacaattgtaagtggtgctggtgaagctgac
atgatcaaaaatcgtgtgaaccaaattaaaggtcaaatggaagctactacttctgattat
gacaaagaaaaactgcaagaacgtttggctaaattagctggtggtgttgctgttctttac
gtaggagctgcttctgaagtagaaatgaaagagaaaaaagatagagttgatgatgcactt
cacgcaactcgtgcagcggttgaagaaggaattgttgctggtggaggtgttgcactttta
agagctaaaaatgcgctttctactatcacacctgacaatgctgatgaagctacaggaatc
caaatcgtatctcgtgctgtagaatctccattaagaactatcgttgaaaatgcaggtctt
gaaggttcagtcgtggttgctaaagtagctgaaggaacaggtgattttggatacaatgca
aaaacagatgagtacgttgatatgttgaaagcaggaattattgatcctaaaaaagtgact
cgtgtagctttagaaaacgctgcttcggttgcgggaatgatattgactactgaatgcgct
ttgatcgacatcaaagaagataatggtggcggaaacccaatgggtggtggtatgccagga
atgatgtaa
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