Flavobacterium galactosidilyticum: LNP27_06770
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Entry
LNP27_06770 CDS
T10182
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fgc Flavobacterium galactosidilyticum
Brite
KEGG Orthology (KO) [BR:
fgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fgc03032
]
LNP27_06770 (topA)
03400 DNA repair and recombination proteins [BR:
fgc03400
]
LNP27_06770 (topA)
Enzymes [BR:
fgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LNP27_06770 (topA)
DNA replication proteins [BR:
fgc03032
]
Prokaryotic type
DNA Topoisomerases
LNP27_06770 (topA)
DNA repair and recombination proteins [BR:
fgc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LNP27_06770 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Poly_export
DUF4294
Motif
Other DBs
NCBI-ProteinID:
UFH47732
LinkDB
All DBs
Position
1555008..1557536
Genome browser
AA seq
842 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGSDFQVESSYGHIADLPSKEIGVDVENGFKPKYEVSADK
KALVTKLKGLAKKADMVWLASDEDREGEAISWHLAEELKLDKSKTKRIVFHEITKTAILK
AIDNPREIDYNLVNAQQARRVLDRLVGYELSPVLWRKIKGGLSAGRVQSVSVRLIVERER
EIHNFNAVATYSVVAEFTNEAGKSFKAKLPKNFNTKKEAEDFLNKNIGSTYKVADLETKP
TKKSPTGPFTTSTLQQEAARKLYLPVGITMQLAQRLYEAGLITYMRTDSVNLSKDAMEAA
QAEIIKSYGKEFSKPRTFVNKSKGAQEAHEAIRPTDMSRHTVDIDRDQARLYDLIWKRTL
ASQMSDAQLERTNVKIEANNHSEIFTASGEVLLFEGFLKVYLEGHDDDEEEQEGMLPAMK
VNEKLQNNYITATERYSRAAARYTEASLVKKLEELGIGRPSTYAPTISTIINRNYVEKGN
LDGQERNYTQLTLQSGKVGEKLLKENTGSDKGKLVPTDIGTIVTDFLVKNFGNILDYNFT
AKVEQDFDEIAEGNIVWTKMMQEFYDQFHPIVKDVEANADRESGERILGIDPKTGKPVSV
RLGKFGPMAQIGAADDEEKKFASLMNDQNIGNITLEETLNLFLLPKNLGEYKGEEVEVSN
GRYGPYIRHGAAFVSLPKGENPLDVDFERAQELIDEKALADAPIAVYKGEGVQKGVGRFG
PFIKWDGLFINVSKKYNFDNLSQADIEALIEDKLQKNIDKVLHNWEEEGILVEKARWGRS
VITKGKIKIELSKDVDATKLTLEEVQEMIAKKTPAKKAAAKKAPAKKAPAKKAVVKKPVA
KK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtaatagtagagtcaccagcaaaggcaaaaacaatcgagaaattt
ttgggaagtgattttcaagtggagtccagttatgggcatatagccgacttgccttcaaag
gaaattggtgtagatgttgaaaatggtttcaaacctaaatacgaagtttctgctgataaa
aaggctttagttactaaattgaaaggattagctaagaaagctgatatggtatggttagca
agtgatgaggatcgcgagggtgaggctatttcttggcatttagccgaagaattaaaatta
gacaaaagtaaaacaaaacgtattgtatttcacgaaattactaaaactgcgattctaaaa
gcgattgataatccacgtgaaattgattataatttagtcaatgcgcaacaagcgcgacgt
gtattagatcgattggttgggtatgaattatctccggtactttggagaaaaataaaagga
ggactttctgccggacgtgttcaatcggtttcggttcgtttgattgtggaacgtgaaaga
gaaattcacaactttaatgctgttgcaacatattctgttgtggcggaattcactaacgaa
gctggaaagtcatttaaagctaaacttcctaaaaatttcaatactaaaaaagaagctgaa
gattttttaaataaaaatataggttctacatataaggtagctgatttagaaacgaagcct
accaaaaaatcgccaactggtccatttacaacttctactttgcaacaagaagcagcgaga
aaattgtatttgcctgttggaattaccatgcaactcgcacaacgtttgtacgaagcggga
cttatcacgtatatgagaacggatagtgtgaacttatccaaagatgcgatggaggctgct
caggctgaaattatcaaatcgtatggaaaagaattctctaaaccacgaacatttgtcaat
aaaagtaaaggcgcacaggaagcacacgaggcgattcgtcctacggatatgtctcgtcat
acggtagatattgacagagaccaagcgcgtttgtatgatttgatttggaaaaggacgttg
gcttcgcaaatgagtgatgcgcaattagaacgtaccaacgtgaaaattgaagcaaacaat
cacagtgaaattttcacggcatctggagaagtgttgctttttgaaggtttcttgaaagtg
tacttggaaggtcatgatgacgatgaagaagagcaagaaggaatgttacctgcaatgaaa
gtcaacgaaaaattacaaaataattacattactgcgacagagagatattctcgtgcagct
gcaagatatactgaagcttccttggtgaaaaaattagaagaattgggtattggtcgtcct
tctacttatgcaccaacgatttctacgattatcaatagaaattatgtagagaaaggaaat
cttgacggacaagaacgtaattatacgcaattgacgttacaatccggaaaagtaggagag
aagctattgaaagaaaataccggttctgataaagggaaattagttcctaccgatattgga
acaattgttacagatttcttagttaagaatttcggaaatattttagattataatttcact
gcaaaagtggaacaggattttgatgaaattgctgaaggaaatatcgtttggacgaaaatg
atgcaagaattctatgatcaatttcacccaatcgtgaaagatgtagaagcgaatgcggat
agagaaagtggggagagaattttaggaatagatccaaaaacagggaaaccggtttcagtt
cgtttagggaaatttggacccatggctcaaataggtgctgctgatgatgaagagaaaaag
tttgcgagtttgatgaacgatcaaaacattggaaacatcactctcgaagaaacattgaat
ttatttttattaccaaaaaatttaggtgaatataaaggagaagaagttgaagtgagtaat
ggccgttatggtccttatattcgtcacggtgctgcttttgtttctttgccaaaaggtgaa
aatccattagatgtagattttgaaagagctcaggaattaatcgatgaaaaagcactagcc
gatgcaccgattgcagtttataaaggtgaaggtgttcaaaaaggtgtgggtcgttttggt
ccttttatcaaatgggacggcttgtttatcaatgtaagtaagaaatataattttgataat
ttgtctcaagcagatattgaagcgttgatagaagataaattgcaaaagaatattgataag
gttttgcataactgggaagaagaaggaattttagttgaaaaagcccgctggggtcgttca
gttattacaaaaggtaaaatcaaaattgaattaagcaaagatgttgatgctacaaaattg
acattagaagaagttcaggaaatgattgccaagaaaacgccggctaaaaaagcagctgct
aaaaaagcacctgcgaagaaagcacctgctaagaaagcagtagttaagaaacccgtagca
aaaaagtaa
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